RNA–Protein interactions for RNA: ENST00000506630.1

TCOF1-209, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 897 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-209ENST00000506630 CAMLGP49069 296 aa9.65□□□□□ -0.86
TCOF1-209ENST00000506630 PLP1P60201 277 aa9.65□□□□□ -0.86
TCOF1-209ENST00000506630 EWSR1Q01844 656 aaKnown RBP eCLIP9.65□□□□□ -0.86
TCOF1-209ENST00000506630 NHLH2Q02577 135 aa9.65□□□□□ -0.86
TCOF1-209ENST00000506630 RAB31Q13636 194 aa9.65□□□□□ -0.86
TCOF1-209ENST00000506630 ACTL10Q5JWF8 245 aa9.65□□□□□ -0.86
TCOF1-209ENST00000506630 UHRF2Q96PU4 802 aa9.65□□□□□ -0.86
TCOF1-209ENST00000506630 ARV1Q9H2C2 271 aa9.65□□□□□ -0.86
TCOF1-209ENST00000506630 WDR83OSQ9Y284 106 aa9.65□□□□□ -0.86
TCOF1-209ENST00000506630 MPC2O95563 127 aa9.64□□□□□ -0.87
TCOF1-209ENST00000506630 CA1P00915 261 aaPredicted RBP9.64□□□□□ -0.87
TCOF1-209ENST00000506630 FGF7P21781 194 aa9.64□□□□□ -0.87
TCOF1-209ENST00000506630 ATP6V1FQ16864 119 aa9.64□□□□□ -0.87
TCOF1-209ENST00000506630 RGS21Q2M5E4 152 aa9.64□□□□□ -0.87
TCOF1-209ENST00000506630 VWC2Q2TAL6 325 aa9.64□□□□□ -0.87
TCOF1-209ENST00000506630 Q6ZWC4 215 aa9.64□□□□□ -0.87
TCOF1-209ENST00000506630 S100A7AQ86SG5 101 aa9.64□□□□□ -0.87
TCOF1-209ENST00000506630 OR5C1Q8NGR4 320 aa9.64□□□□□ -0.87
TCOF1-209ENST00000506630 LINC00052Q96N35 136 aa9.64□□□□□ -0.87
TCOF1-209ENST00000506630 GPR82Q96P67 336 aa9.64□□□□□ -0.87
TCOF1-209ENST00000506630 OVOL2Q9BRP0 275 aa9.64□□□□□ -0.87
TCOF1-209ENST00000506630 SHANK2-AS3Q9BTD1 123 aa9.64□□□□□ -0.87
TCOF1-209ENST00000506630 CSTL1Q9H114 145 aa9.64□□□□□ -0.87
TCOF1-209ENST00000506630 MED28Q9H204 178 aa9.64□□□□□ -0.87
TCOF1-209ENST00000506630 SEPSECSQ9HD40 501 aaKnown RBP9.64□□□□□ -0.87
TCOF1-209ENST00000506630 SPRY2O43597 315 aa9.63□□□□□ -0.87
TCOF1-209ENST00000506630 COX7A2P2O60397 106 aa9.63□□□□□ -0.87
TCOF1-209ENST00000506630 ATF4P18848 351 aaPredicted RBP9.63□□□□□ -0.87
TCOF1-209ENST00000506630 CXCL3P19876 107 aa9.63□□□□□ -0.87
TCOF1-209ENST00000506630 ID1P41134 155 aa9.63□□□□□ -0.87
TCOF1-209ENST00000506630 MEOX2P50222 304 aa9.63□□□□□ -0.87
TCOF1-209ENST00000506630 FGL1Q08830 312 aa9.63□□□□□ -0.87
TCOF1-209ENST00000506630 CLINT1Q14677 625 aa9.63□□□□□ -0.87
TCOF1-209ENST00000506630 PLECQ15149 4684 aaKnown RBP9.63□□□□□ -0.87
TCOF1-209ENST00000506630 PXDC1Q5TGL8 231 aa9.63□□□□□ -0.87
TCOF1-209ENST00000506630 MIC13Q5XKP0 118 aa9.63□□□□□ -0.87
TCOF1-209ENST00000506630 C16orf92Q96LL3 132 aa9.63□□□□□ -0.87
TCOF1-209ENST00000506630 RSG1Q9BU20 258 aa9.63□□□□□ -0.87
TCOF1-209ENST00000506630 SOCS3O14543 225 aa9.62□□□□□ -0.87
TCOF1-209ENST00000506630 RPL7P18124 248 aaKnown RBP9.62□□□□□ -0.87
TCOF1-209ENST00000506630 PSMB3P49720 205 aa9.62□□□□□ -0.87
TCOF1-209ENST00000506630 B2MP61769 119 aa9.62□□□□□ -0.87
TCOF1-209ENST00000506630 OPCMLQ14982 345 aa9.62□□□□□ -0.87
TCOF1-209ENST00000506630 FCN2Q15485 313 aa9.62□□□□□ -0.87
TCOF1-209ENST00000506630 SAMD13Q5VXD3 122 aa9.62□□□□□ -0.87
TCOF1-209ENST00000506630 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.62□□□□□ -0.87
TCOF1-209ENST00000506630 PATE2Q6UY27 113 aa9.62□□□□□ -0.87
TCOF1-209ENST00000506630 Q6ZRG5 221 aa9.62□□□□□ -0.87
TCOF1-209ENST00000506630 LINC00305Q7Z4B0 112 aa9.62□□□□□ -0.87
TCOF1-209ENST00000506630 TRPT1Q86TN4 253 aaKnown RBP9.62□□□□□ -0.87
TCOF1-209ENST00000506630 THAP6Q8TBB0 222 aa9.62□□□□□ -0.87
TCOF1-209ENST00000506630 RNF183Q96D59 192 aa9.62□□□□□ -0.87
TCOF1-209ENST00000506630 MBD2Q9UBB5 411 aa9.62□□□□□ -0.87
TCOF1-209ENST00000506630 TP53TG1Q9Y2A0 90 aa9.62□□□□□ -0.87
TCOF1-209ENST00000506630 ISLRO14498 428 aa9.61□□□□□ -0.87
TCOF1-209ENST00000506630 MPDU1O75352 247 aa9.61□□□□□ -0.87
TCOF1-209ENST00000506630 DEFB1P60022 68 aa9.61□□□□□ -0.87
TCOF1-209ENST00000506630 C10orf113Q5VZT2 155 aa9.61□□□□□ -0.87
TCOF1-209ENST00000506630 OR11H7Q8NGC8 314 aa9.61□□□□□ -0.87
TCOF1-209ENST00000506630 RNF126Q9BV68 326 aa9.61□□□□□ -0.87
TCOF1-209ENST00000506630 NPCDR1Q9BY65 106 aa9.61□□□□□ -0.87
TCOF1-209ENST00000506630 RNF24Q9Y225 148 aa9.61□□□□□ -0.87
TCOF1-209ENST00000506630 ELOA3CA0A087WX78 387 aaPredicted RBP9.6□□□□□ -0.87
TCOF1-209ENST00000506630 SPP1P10451 314 aa9.6□□□□□ -0.87
TCOF1-209ENST00000506630 C4BPBP20851 252 aa9.6□□□□□ -0.87
TCOF1-209ENST00000506630 RPL12P30050 165 aaKnown RBP9.6□□□□□ -0.87
TCOF1-209ENST00000506630 RPL29P47914 159 aaKnown RBP9.6□□□□□ -0.87
TCOF1-209ENST00000506630 PRR20EP86478 221 aa9.6□□□□□ -0.87
TCOF1-209ENST00000506630 PRR20CP86479 221 aa9.6□□□□□ -0.87
TCOF1-209ENST00000506630 PRR20DP86480 221 aa9.6□□□□□ -0.87
TCOF1-209ENST00000506630 PRR20BP86481 221 aa9.6□□□□□ -0.87
TCOF1-209ENST00000506630 PRR20AP86496 221 aa9.6□□□□□ -0.87
TCOF1-209ENST00000506630 MORN3Q6PF18 240 aaPredicted RBP9.6□□□□□ -0.87
TCOF1-209ENST00000506630 OR1L4Q8NGR5 311 aa9.6□□□□□ -0.87
TCOF1-209ENST00000506630 TMEM37Q8WXS4 190 aa9.6□□□□□ -0.87
TCOF1-209ENST00000506630 PFDN5Q99471 154 aa9.6□□□□□ -0.87
TCOF1-209ENST00000506630 ATP5SQ99766 215 aa9.6□□□□□ -0.87
TCOF1-209ENST00000506630 SLC39A9Q9NUM3 307 aa9.6□□□□□ -0.87
TCOF1-209ENST00000506630 HSPB11Q9Y547 144 aa9.6□□□□□ -0.87
TCOF1-209ENST00000506630 PXMP4Q9Y6I8 212 aa9.6□□□□□ -0.87
TCOF1-209ENST00000506630 HLA-DRB4P13762 266 aa9.59□□□□□ -0.87
TCOF1-209ENST00000506630 GDF5OSQ5U4N7 250 aa9.59□□□□□ -0.87
TCOF1-209ENST00000506630 FOXI2Q6ZQN5 318 aa9.59□□□□□ -0.87
TCOF1-209ENST00000506630 GATAD1Q8WUU5 269 aa9.59□□□□□ -0.87
TCOF1-209ENST00000506630 C20orf173Q96LM9 149 aa9.59□□□□□ -0.87
TCOF1-209ENST00000506630 C17orf77Q96MU5 243 aa9.59□□□□□ -0.87
TCOF1-209ENST00000506630 SMIM3Q9BZL3 60 aa9.59□□□□□ -0.87
TCOF1-209ENST00000506630 SAV1Q9H4B6 383 aaPredicted RBP9.59□□□□□ -0.87
TCOF1-209ENST00000506630 DNAJC4Q9NNZ3 241 aa9.59□□□□□ -0.87
TCOF1-209ENST00000506630 RPRMQ9NS64 109 aa9.59□□□□□ -0.87
TCOF1-209ENST00000506630 HLA-DRB4X5D2U9 266 aa9.59□□□□□ -0.87
TCOF1-209ENST00000506630 H3BMM0 161 aa9.58□□□□□ -0.88
TCOF1-209ENST00000506630 IGKV3-20P01619 116 aa9.58□□□□□ -0.88
TCOF1-209ENST00000506630 OXA1LQ15070 435 aa9.58□□□□□ -0.88
TCOF1-209ENST00000506630 MORN5Q5VZ52 161 aa9.58□□□□□ -0.88
TCOF1-209ENST00000506630 IGFL4Q6B9Z1 124 aa9.58□□□□□ -0.88
TCOF1-209ENST00000506630 EBLN2Q6P2I7 272 aa9.58□□□□□ -0.88
TCOF1-209ENST00000506630 BPIFA4PQ86YQ2 179 aa9.58□□□□□ -0.88
TCOF1-209ENST00000506630 RNF182Q8N6D2 247 aa9.58□□□□□ -0.88
TCOF1-209ENST00000506630 ZNF709Q8N972 641 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms