RNA–Protein interactions for RNA: ENST00000505957.1

CPNE4-206, Transcript of copine 4, humanhuman

TSL 3

Gene CPNE4, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-206ENST00000505957 PATE2Q6UY27 113 aa8.24□□□□□ -1.09
CPNE4-206ENST00000505957 S100A7AQ86SG5 101 aa8.24□□□□□ -1.09
CPNE4-206ENST00000505957 NECAP1Q8NC96 275 aa8.24□□□□□ -1.09
CPNE4-206ENST00000505957 CLRN3Q8NCR9 226 aa8.24□□□□□ -1.09
CPNE4-206ENST00000505957 ZNF503Q96F45 646 aa8.24□□□□□ -1.09
CPNE4-206ENST00000505957 PRR25Q96S07 402 aa8.24□□□□□ -1.09
CPNE4-206ENST00000505957 ASCL2Q99929 193 aa8.24□□□□□ -1.09
CPNE4-206ENST00000505957 HUWE1Q7Z6Z7 4374 aaKnown RBP8.24□□□□□ -1.09
CPNE4-206ENST00000505957 EPPK1P58107 5090 aaKnown RBP8.24□□□□□ -1.09
CPNE4-206ENST00000505957 DNAH1Q9P2D7 4330 aa8.23□□□□□ -1.09
CPNE4-206ENST00000505957 TRAV41A0A0B4J266 112 aa8.23□□□□□ -1.09
CPNE4-206ENST00000505957 A0A1W2PRE2 83 aa8.23□□□□□ -1.09
CPNE4-206ENST00000505957 FAM223BA6NKX1 122 aa8.23□□□□□ -1.09
CPNE4-206ENST00000505957 C11orf94C9JXX5 98 aa8.23□□□□□ -1.09
CPNE4-206ENST00000505957 PAGE4O60829 102 aa8.23□□□□□ -1.09
CPNE4-206ENST00000505957 HYPMO75409 117 aa8.23□□□□□ -1.09
CPNE4-206ENST00000505957 NDUFB8O95169 186 aa8.23□□□□□ -1.09
CPNE4-206ENST00000505957 IGHV3-48P01763 117 aa8.23□□□□□ -1.09
CPNE4-206ENST00000505957 PSG1P11464 419 aa8.23□□□□□ -1.09
CPNE4-206ENST00000505957 PNRC1Q12796 327 aaPredicted RBP8.23□□□□□ -1.09
CPNE4-206ENST00000505957 RHEBQ15382 184 aa8.23□□□□□ -1.09
CPNE4-206ENST00000505957 ECSCRQ19T08 205 aa8.23□□□□□ -1.09
CPNE4-206ENST00000505957 TIGITQ495A1 244 aa8.23□□□□□ -1.09
CPNE4-206ENST00000505957 ATRAIDQ6UW56 229 aa8.23□□□□□ -1.09
CPNE4-206ENST00000505957 FAM223AQ8IWN6 122 aa8.23□□□□□ -1.09
CPNE4-206ENST00000505957 OR5T1Q8NG75 326 aa8.23□□□□□ -1.09
CPNE4-206ENST00000505957 OR51G1Q8NGK1 321 aa8.23□□□□□ -1.09
CPNE4-206ENST00000505957 ZNF502Q8TBZ5 544 aa8.23□□□□□ -1.09
CPNE4-206ENST00000505957 C11orf52Q96A22 123 aa8.23□□□□□ -1.09
CPNE4-206ENST00000505957 TCEAL7Q9BRU2 100 aa8.23□□□□□ -1.09
CPNE4-206ENST00000505957 SLC25A2Q9BXI2 301 aa8.23□□□□□ -1.09
CPNE4-206ENST00000505957 MRPL27Q9P0M9 148 aaKnown RBP8.23□□□□□ -1.09
CPNE4-206ENST00000505957 FBXL7Q9UJT9 491 aa8.23□□□□□ -1.09
CPNE4-206ENST00000505957 TRBV7-1A0A0A6YYK4 115 aa8.22□□□□□ -1.09
CPNE4-206ENST00000505957 IGHV3-21A0A0B4J1V1 117 aa8.22□□□□□ -1.09
CPNE4-206ENST00000505957 LCE6AA0A183 80 aa8.22□□□□□ -1.09
CPNE4-206ENST00000505957 FAM74A7A6NL05 159 aa8.22□□□□□ -1.09
CPNE4-206ENST00000505957 AP4M1O00189 453 aa8.22□□□□□ -1.09
CPNE4-206ENST00000505957 GNG7O60262 68 aa8.22□□□□□ -1.09
CPNE4-206ENST00000505957 EIF3GO75821 320 aaKnown RBP eCLIP8.22□□□□□ -1.09
CPNE4-206ENST00000505957 OR2J3O76001 311 aa8.22□□□□□ -1.09
CPNE4-206ENST00000505957 RD3LP0DJH9 198 aa8.22□□□□□ -1.09
CPNE4-206ENST00000505957 CDX1P47902 265 aaPredicted RBP8.22□□□□□ -1.09
CPNE4-206ENST00000505957 RNF152Q8N8N0 203 aa8.22□□□□□ -1.09
CPNE4-206ENST00000505957 DUX3Q96PT4 197 aa8.22□□□□□ -1.09
CPNE4-206ENST00000505957 NIPSNAP3BQ9BS92 247 aa8.22□□□□□ -1.09
CPNE4-206ENST00000505957 ZNF355PQ9NSJ1 428 aa8.22□□□□□ -1.09
CPNE4-206ENST00000505957 TMEM14CQ9P0S9 112 aa8.22□□□□□ -1.09
CPNE4-206ENST00000505957 LINC00527Q9UJ94 153 aa8.22□□□□□ -1.09
CPNE4-206ENST00000505957 RNF24Q9Y225 148 aa8.22□□□□□ -1.09
CPNE4-206ENST00000505957 HIGD1AQ9Y241 93 aa8.22□□□□□ -1.09
CPNE4-206ENST00000505957 ZNF256Q9Y2P7 627 aaPredicted RBP8.22□□□□□ -1.09
CPNE4-206ENST00000505957 SMAD5-AS1Q9Y6J3 95 aa8.22□□□□□ -1.09
CPNE4-206ENST00000505957 OR7C2O60412 319 aa8.21□□□□□ -1.1
CPNE4-206ENST00000505957 SCO1O75880 301 aa8.21□□□□□ -1.1
CPNE4-206ENST00000505957 RPLP1P05386 114 aaKnown RBP8.21□□□□□ -1.1
CPNE4-206ENST00000505957 ELANEP08246 267 aa8.21□□□□□ -1.1
CPNE4-206ENST00000505957 PPIFP30405 207 aaKnown RBP8.21□□□□□ -1.1
CPNE4-206ENST00000505957 S100A7P31151 101 aa8.21□□□□□ -1.1
CPNE4-206ENST00000505957 INSL3P51460 131 aa8.21□□□□□ -1.1
CPNE4-206ENST00000505957 RHOGP84095 191 aa8.21□□□□□ -1.1
CPNE4-206ENST00000505957 CFHR3Q02985 330 aa8.21□□□□□ -1.1
CPNE4-206ENST00000505957 FOXE3Q13461 319 aa8.21□□□□□ -1.1
CPNE4-206ENST00000505957 LCNL1Q6ZST4 164 aa8.21□□□□□ -1.1
CPNE4-206ENST00000505957 LINC00305Q7Z4B0 112 aa8.21□□□□□ -1.1
CPNE4-206ENST00000505957 IQCF2Q8IXL9 164 aa8.21□□□□□ -1.1
CPNE4-206ENST00000505957 ZNF491Q8N8L2 437 aa8.21□□□□□ -1.1
CPNE4-206ENST00000505957 OR1B1Q8NGR6 318 aa8.21□□□□□ -1.1
CPNE4-206ENST00000505957 TVP23CQ96ET8 276 aa8.21□□□□□ -1.1
CPNE4-206ENST00000505957 RCHY1Q96PM5 261 aa8.21□□□□□ -1.1
CPNE4-206ENST00000505957 DOK5Q9P104 306 aa8.21□□□□□ -1.1
CPNE4-206ENST00000505957 A0A087WWC5 75 aa8.2□□□□□ -1.1
CPNE4-206ENST00000505957 LINC01548A6NM66 108 aa8.2□□□□□ -1.1
CPNE4-206ENST00000505957 B4DEV8 164 aa8.2□□□□□ -1.1
CPNE4-206ENST00000505957 G3V318 75 aa8.2□□□□□ -1.1
CPNE4-206ENST00000505957 H3BQ15 152 aa8.2□□□□□ -1.1
CPNE4-206ENST00000505957 H3BRN7 92 aa8.2□□□□□ -1.1
CPNE4-206ENST00000505957 DNASE2O00115 360 aaPredicted RBP8.2□□□□□ -1.1
CPNE4-206ENST00000505957 ORM2P19652 201 aa8.2□□□□□ -1.1
CPNE4-206ENST00000505957 LYZP61626 148 aa8.2□□□□□ -1.1
CPNE4-206ENST00000505957 UBE2L3P68036 154 aaKnown RBP8.2□□□□□ -1.1
CPNE4-206ENST00000505957 FHL3Q13643 280 aa8.2□□□□□ -1.1
CPNE4-206ENST00000505957 C15orf32Q32M92 178 aa8.2□□□□□ -1.1
CPNE4-206ENST00000505957 Q56UQ5 140 aa8.2□□□□□ -1.1
CPNE4-206ENST00000505957 FAM209BQ5JX69 171 aa8.2□□□□□ -1.1
CPNE4-206ENST00000505957 MORN5Q5VZ52 161 aa8.2□□□□□ -1.1
CPNE4-206ENST00000505957 ZNF343Q6P1L6 599 aa8.2□□□□□ -1.1
CPNE4-206ENST00000505957 ZNF600Q6ZNG1 722 aa8.2□□□□□ -1.1
CPNE4-206ENST00000505957 Q8WTZ3 238 aa8.2□□□□□ -1.1
CPNE4-206ENST00000505957 EEF1AKMT3Q96AZ1 226 aa8.2□□□□□ -1.1
CPNE4-206ENST00000505957 RNF125Q96EQ8 232 aa8.2□□□□□ -1.1
CPNE4-206ENST00000505957 USMG5Q96IX5 58 aa8.2□□□□□ -1.1
CPNE4-206ENST00000505957 UHRF2Q96PU4 802 aa8.2□□□□□ -1.1
CPNE4-206ENST00000505957 SHANK2-AS3Q9BTD1 123 aa8.2□□□□□ -1.1
CPNE4-206ENST00000505957 PAXXQ9BUH6 204 aa8.2□□□□□ -1.1
CPNE4-206ENST00000505957 SLC25A39Q9BZJ4 359 aaPredicted RBP8.2□□□□□ -1.1
CPNE4-206ENST00000505957 OR51M1Q9H341 326 aa8.2□□□□□ -1.1
CPNE4-206ENST00000505957 TUBA4BQ9H853 241 aa8.2□□□□□ -1.1
CPNE4-206ENST00000505957 NAT8Q9UHE5 227 aa8.2□□□□□ -1.1
CPNE4-206ENST00000505957 YTHDF2Q9Y5A9 579 aaKnown RBP8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms