RNA–Protein interactions for RNA: ENST00000504220.6

PCDH11X-208, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-208ENST00000504220 TGFBR3LH3BV60 316 aa3.01□□□□□ -1.93
PCDH11X-208ENST00000504220 SERF1AO75920 110 aa3.01□□□□□ -1.93
PCDH11X-208ENST00000504220 APOMO95445 188 aa3.01□□□□□ -1.93
PCDH11X-208ENST00000504220 LINC00694P0DN24 101 aa3.01□□□□□ -1.93
PCDH11X-208ENST00000504220 ERGP11308 486 aa3.01□□□□□ -1.93
PCDH11X-208ENST00000504220 CFPP27918 469 aa3.01□□□□□ -1.93
PCDH11X-208ENST00000504220 PPIFP30405 207 aaKnown RBP3.01□□□□□ -1.93
PCDH11X-208ENST00000504220 NTF4P34130 210 aa3.01□□□□□ -1.93
PCDH11X-208ENST00000504220 RPL27AP46776 148 aaKnown RBP3.01□□□□□ -1.93
PCDH11X-208ENST00000504220 EMP1P54849 157 aa3.01□□□□□ -1.93
PCDH11X-208ENST00000504220 LOXL3P58215 753 aa3.01□□□□□ -1.93
PCDH11X-208ENST00000504220 SUPT4H1P63272 117 aaKnown RBP3.01□□□□□ -1.93
PCDH11X-208ENST00000504220 ACSF3Q4G176 576 aaPredicted RBP3.01□□□□□ -1.93
PCDH11X-208ENST00000504220 Q8NA96 180 aa3.01□□□□□ -1.93
PCDH11X-208ENST00000504220 OR9G4Q8NGQ1 327 aa3.01□□□□□ -1.93
PCDH11X-208ENST00000504220 VSTM2AQ8TAG5 236 aa3.01□□□□□ -1.93
PCDH11X-208ENST00000504220 ADTRPQ96IZ2 230 aa3.01□□□□□ -1.93
PCDH11X-208ENST00000504220 NABP2Q9BQ15 211 aa3.01□□□□□ -1.93
PCDH11X-208ENST00000504220 DERL1Q9BUN8 251 aa3.01□□□□□ -1.93
PCDH11X-208ENST00000504220 RNASE7Q9H1E1 156 aaKnown RBP3.01□□□□□ -1.93
PCDH11X-208ENST00000504220 DEPPQ9NTK1 212 aa3.01□□□□□ -1.93
PCDH11X-208ENST00000504220 PRNDQ9UKY0 176 aa3.01□□□□□ -1.93
PCDH11X-208ENST00000504220 ADAMTS9Q9P2N4 1935 aa3.01□□□□□ -1.93
PCDH11X-208ENST00000504220 NPIPB13A6NJU9 1138 aa3.01□□□□□ -1.93
PCDH11X-208ENST00000504220 NPIPB4C9JG80 1138 aa3.01□□□□□ -1.93
PCDH11X-208ENST00000504220 CDX4O14627 284 aaPredicted RBP3.01□□□□□ -1.93
PCDH11X-208ENST00000504220 FOXH1O75593 365 aa3.01□□□□□ -1.93
PCDH11X-208ENST00000504220 ISG15P05161 165 aa3.01□□□□□ -1.93
PCDH11X-208ENST00000504220 CD24P25063 80 aa3.01□□□□□ -1.93
PCDH11X-208ENST00000504220 SLC25A47Q6Q0C1 308 aa3.01□□□□□ -1.93
PCDH11X-208ENST00000504220 SYT8Q8NBV8 401 aa3.01□□□□□ -1.93
PCDH11X-208ENST00000504220 OSR1Q8TAX0 266 aaPredicted RBP3.01□□□□□ -1.93
PCDH11X-208ENST00000504220 RNF125Q96EQ8 232 aa3.01□□□□□ -1.93
PCDH11X-208ENST00000504220 URB1-AS1Q96HZ7 61 aa3.01□□□□□ -1.93
PCDH11X-208ENST00000504220 Q96M66 194 aa3.01□□□□□ -1.93
PCDH11X-208ENST00000504220 SLC25A10Q9UBX3 287 aaPredicted RBP3.01□□□□□ -1.93
PCDH11X-208ENST00000504220 IGKV1D-13A0A0B4J2D9 117 aa3□□□□□ -1.93
PCDH11X-208ENST00000504220 C2orf70A6NJV1 201 aa3□□□□□ -1.93
PCDH11X-208ENST00000504220 C17orf98A8MV24 154 aa3□□□□□ -1.93
PCDH11X-208ENST00000504220 F5H768 121 aa3□□□□□ -1.93
PCDH11X-208ENST00000504220 IGKV1-13P0DP09 117 aa3□□□□□ -1.93
PCDH11X-208ENST00000504220 CD59P13987 128 aa3□□□□□ -1.93
PCDH11X-208ENST00000504220 FXYD7P58549 80 aa3□□□□□ -1.93
PCDH11X-208ENST00000504220 PMCHL1Q16048 86 aa3□□□□□ -1.93
PCDH11X-208ENST00000504220 Q6ZS49 121 aa3□□□□□ -1.93
PCDH11X-208ENST00000504220 Q6ZUT4 128 aa3□□□□□ -1.93
PCDH11X-208ENST00000504220 LSM10Q969L4 123 aaKnown RBP3□□□□□ -1.93
PCDH11X-208ENST00000504220 SRXN1Q9BYN0 137 aa3□□□□□ -1.93
PCDH11X-208ENST00000504220 FNDC4Q9H6D8 234 aaPredicted RBP3□□□□□ -1.93
PCDH11X-208ENST00000504220 VSIRQ9H7M9 311 aa3□□□□□ -1.93
PCDH11X-208ENST00000504220 SDF2L1Q9HCN8 221 aa3□□□□□ -1.93
PCDH11X-208ENST00000504220 ANKHD1Q8IWZ3 2542 aaKnown RBP3□□□□□ -1.93
PCDH11X-208ENST00000504220 A0A0U1RRA0 63 aa3□□□□□ -1.93
PCDH11X-208ENST00000504220 C9JCJ5 164 aa3□□□□□ -1.93
PCDH11X-208ENST00000504220 CD5LO43866 347 aa3□□□□□ -1.93
PCDH11X-208ENST00000504220 HLA-DQA1P01909 254 aa3□□□□□ -1.93
PCDH11X-208ENST00000504220 HLA-DRB1P01911 266 aa3□□□□□ -1.93
PCDH11X-208ENST00000504220 AMY1AP04745 511 aa3□□□□□ -1.93
PCDH11X-208ENST00000504220 C8orf88P0DMB2 117 aa3□□□□□ -1.93
PCDH11X-208ENST00000504220 TBR1Q16650 682 aa3□□□□□ -1.93
PCDH11X-208ENST00000504220 LCN12Q6JVE5 192 aa3□□□□□ -1.93
PCDH11X-208ENST00000504220 C12orf54Q6X4T0 127 aa3□□□□□ -1.93
PCDH11X-208ENST00000504220 TMEM86BQ8N661 226 aa3□□□□□ -1.93
PCDH11X-208ENST00000504220 STPG3Q8N7X2 389 aa3□□□□□ -1.93
PCDH11X-208ENST00000504220 DNAJC30Q96LL9 226 aa3□□□□□ -1.93
PCDH11X-208ENST00000504220 SCNM1Q9BWG6 230 aa3□□□□□ -1.93
PCDH11X-208ENST00000504220 TTTY12Q9BZ98 90 aa3□□□□□ -1.93
PCDH11X-208ENST00000504220 HIGD1AQ9Y241 93 aa3□□□□□ -1.93
PCDH11X-208ENST00000504220 CELSR3Q9NYQ7 3312 aa3□□□□□ -1.93
PCDH11X-208ENST00000504220 USP9YO00507 2555 aaPredicted RBP3□□□□□ -1.93
PCDH11X-208ENST00000504220 A0A1B0GWB2 263 aa3□□□□□ -1.93
PCDH11X-208ENST00000504220 H3BUT2 72 aa3□□□□□ -1.93
PCDH11X-208ENST00000504220 M0R381 172 aa3□□□□□ -1.93
PCDH11X-208ENST00000504220 SYNGR3O43761 229 aa3□□□□□ -1.93
PCDH11X-208ENST00000504220 GPX1P07203 203 aa3□□□□□ -1.93
PCDH11X-208ENST00000504220 GCHFRP30047 84 aa3□□□□□ -1.93
PCDH11X-208ENST00000504220 LINC00205P59089 165 aa3□□□□□ -1.93
PCDH11X-208ENST00000504220 HSPE1P61604 102 aaKnown RBP3□□□□□ -1.93
PCDH11X-208ENST00000504220 KLRB1Q12918 225 aa3□□□□□ -1.93
PCDH11X-208ENST00000504220 C4orf26Q17RF5 130 aa3□□□□□ -1.93
PCDH11X-208ENST00000504220 IGFL2Q6UWQ7 119 aa3□□□□□ -1.93
PCDH11X-208ENST00000504220 CLDND2Q8NHS1 167 aa3□□□□□ -1.93
PCDH11X-208ENST00000504220 JKAMPQ9P055 326 aa3□□□□□ -1.93
PCDH11X-208ENST00000504220 ZNF256Q9Y2P7 627 aaPredicted RBP3□□□□□ -1.93
PCDH11X-208ENST00000504220 PRRC2CQ9Y520 2896 aaKnown RBP3□□□□□ -1.93
PCDH11X-208ENST00000504220 ANKRD11Q6UB99 2663 aaPredicted RBP2.99□□□□□ -1.93
PCDH11X-208ENST00000504220 IGKV3D-20A0A0C4DH25 116 aa2.99□□□□□ -1.93
PCDH11X-208ENST00000504220 MGST3O14880 152 aa2.99□□□□□ -1.93
PCDH11X-208ENST00000504220 CD3EP07766 207 aa2.99□□□□□ -1.93
PCDH11X-208ENST00000504220 SRP14P37108 136 aaKnown RBP2.99□□□□□ -1.93
PCDH11X-208ENST00000504220 RPL23P62829 140 aaKnown RBP2.99□□□□□ -1.93
PCDH11X-208ENST00000504220 LY6EQ16553 131 aa2.99□□□□□ -1.93
PCDH11X-208ENST00000504220 FHL5Q5TD97 284 aa2.99□□□□□ -1.93
PCDH11X-208ENST00000504220 TMEM136Q6ZRR5 245 aa2.99□□□□□ -1.93
PCDH11X-208ENST00000504220 GCSAMQ8N6F7 178 aa2.99□□□□□ -1.93
PCDH11X-208ENST00000504220 KLF14Q8TD94 323 aaPredicted RBP2.99□□□□□ -1.93
PCDH11X-208ENST00000504220 COQ2Q96H96 371 aa2.99□□□□□ -1.93
PCDH11X-208ENST00000504220 PSMG3Q9BT73 122 aaPredicted RBP2.99□□□□□ -1.93
PCDH11X-208ENST00000504220 CALYQ9NYX4 217 aa2.99□□□□□ -1.93
PCDH11X-208ENST00000504220 LRRK2Q5S007 2527 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms