RNA–Protein interactions for RNA: ENST00000503338.5

TOPBP1-202, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 3

Gene TOPBP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-202ENST00000503338 GALR1P47211 349 aa6.26□□□□□ -1.41
TOPBP1-202ENST00000503338 CD81P60033 236 aa6.26□□□□□ -1.41
TOPBP1-202ENST00000503338 SRSF3P84103 164 aaKnown RBP6.26□□□□□ -1.41
TOPBP1-202ENST00000503338 MORN5Q5VZ52 161 aa6.26□□□□□ -1.41
TOPBP1-202ENST00000503338 Q71RC1 249 aaPredicted RBP6.26□□□□□ -1.41
TOPBP1-202ENST00000503338 OR8I2Q8N0Y5 310 aa6.26□□□□□ -1.41
TOPBP1-202ENST00000503338 ARL6IP6Q8N6S5 226 aa6.26□□□□□ -1.41
TOPBP1-202ENST00000503338 LINC01006Q8NI28 216 aa6.26□□□□□ -1.41
TOPBP1-202ENST00000503338 WIPF2Q8TF74 440 aaPredicted RBP6.26□□□□□ -1.41
TOPBP1-202ENST00000503338 FXYD5Q96DB9 178 aa6.26□□□□□ -1.41
TOPBP1-202ENST00000503338 DAZ1Q9NQZ3 744 aaKnown RBP6.26□□□□□ -1.41
TOPBP1-202ENST00000503338 CLEC5AQ9NY25 188 aa6.26□□□□□ -1.41
TOPBP1-202ENST00000503338 U3KQE9 123 aa6.26□□□□□ -1.41
TOPBP1-202ENST00000503338 CLPSL1A2RUU4 121 aa6.25□□□□□ -1.41
TOPBP1-202ENST00000503338 BUB3O43684 328 aa6.25□□□□□ -1.41
TOPBP1-202ENST00000503338 EIF3GO75821 320 aaKnown RBP eCLIP6.25□□□□□ -1.41
TOPBP1-202ENST00000503338 SNAPINO95295 136 aa6.25□□□□□ -1.41
TOPBP1-202ENST00000503338 PYYP10082 97 aa6.25□□□□□ -1.41
TOPBP1-202ENST00000503338 ATF4P18848 351 aaPredicted RBP6.25□□□□□ -1.41
TOPBP1-202ENST00000503338 UBE2G2P60604 165 aa6.25□□□□□ -1.41
TOPBP1-202ENST00000503338 PSG9Q00887 426 aa6.25□□□□□ -1.41
TOPBP1-202ENST00000503338 PNRC1Q12796 327 aaPredicted RBP6.25□□□□□ -1.41
TOPBP1-202ENST00000503338 SAMD13Q5VXD3 122 aa6.25□□□□□ -1.41
TOPBP1-202ENST00000503338 C10orf99Q6UWK7 81 aa6.25□□□□□ -1.41
TOPBP1-202ENST00000503338 LCNL1Q6ZST4 164 aa6.25□□□□□ -1.41
TOPBP1-202ENST00000503338 REC114Q7Z4M0 266 aa6.25□□□□□ -1.41
TOPBP1-202ENST00000503338 HIST1H2BAQ96A08 127 aa6.25□□□□□ -1.41
TOPBP1-202ENST00000503338 C11orf52Q96A22 123 aa6.25□□□□□ -1.41
TOPBP1-202ENST00000503338 LINC00052Q96N35 136 aa6.25□□□□□ -1.41
TOPBP1-202ENST00000503338 NIPSNAP3BQ9BS92 247 aa6.25□□□□□ -1.41
TOPBP1-202ENST00000503338 C20orf24Q9BUV8 137 aa6.25□□□□□ -1.41
TOPBP1-202ENST00000503338 OTORQ9NRC9 128 aa6.25□□□□□ -1.41
TOPBP1-202ENST00000503338 RNF114Q9Y508 228 aa6.25□□□□□ -1.41
TOPBP1-202ENST00000503338 TSSC4Q9Y5U2 329 aaPredicted RBP6.25□□□□□ -1.41
TOPBP1-202ENST00000503338 FLNBO75369 2602 aaKnown RBP6.25□□□□□ -1.41
TOPBP1-202ENST00000503338 TRBV19A0A075B6N1 114 aa6.24□□□□□ -1.41
TOPBP1-202ENST00000503338 A0A087X0K7 114 aa6.24□□□□□ -1.41
TOPBP1-202ENST00000503338 IGHV3-35A0A0C4DH35 117 aa6.24□□□□□ -1.41
TOPBP1-202ENST00000503338 SERTM2A0A1B0GWG4 89 aa6.24□□□□□ -1.41
TOPBP1-202ENST00000503338 ZNF320A2RRD8 509 aa6.24□□□□□ -1.41
TOPBP1-202ENST00000503338 A8MWP6 167 aa6.24□□□□□ -1.41
TOPBP1-202ENST00000503338 C9JQL5 133 aa6.24□□□□□ -1.41
TOPBP1-202ENST00000503338 LINC01619G3V211 115 aa6.24□□□□□ -1.41
TOPBP1-202ENST00000503338 TRBV12-3P01733 135 aa6.24□□□□□ -1.41
TOPBP1-202ENST00000503338 APOC3P02656 99 aa6.24□□□□□ -1.41
TOPBP1-202ENST00000503338 S100A9P06702 114 aaKnown RBP6.24□□□□□ -1.41
TOPBP1-202ENST00000503338 IGLC2P0DOY2 106 aa6.24□□□□□ -1.41
TOPBP1-202ENST00000503338 SUMO1P63165 101 aaKnown RBP6.24□□□□□ -1.41
TOPBP1-202ENST00000503338 KHDC1LQ5JSQ8 128 aa6.24□□□□□ -1.41
TOPBP1-202ENST00000503338 LEMD1Q68G75 181 aa6.24□□□□□ -1.41
TOPBP1-202ENST00000503338 C1QL4Q86Z23 238 aa6.24□□□□□ -1.41
TOPBP1-202ENST00000503338 CCDC28AQ8IWP9 274 aa6.24□□□□□ -1.41
TOPBP1-202ENST00000503338 CYB561D1Q8N8Q1 229 aa6.24□□□□□ -1.41
TOPBP1-202ENST00000503338 C5orf17Q8NAS9 161 aa6.24□□□□□ -1.41
TOPBP1-202ENST00000503338 CMTM2Q8TAZ6 248 aa6.24□□□□□ -1.41
TOPBP1-202ENST00000503338 DPF1Q92782 380 aa6.24□□□□□ -1.41
TOPBP1-202ENST00000503338 ZNF414Q96IQ9 312 aa6.24□□□□□ -1.41
TOPBP1-202ENST00000503338 SLC50A1Q9BRV3 221 aa6.24□□□□□ -1.41
TOPBP1-202ENST00000503338 AAMDCQ9H7C9 122 aa6.24□□□□□ -1.41
TOPBP1-202ENST00000503338 PRELID1Q9Y255 219 aa6.24□□□□□ -1.41
TOPBP1-202ENST00000503338 YTHDF2Q9Y5A9 579 aaKnown RBP6.24□□□□□ -1.41
TOPBP1-202ENST00000503338 AKAP9Q99996 3911 aa6.23□□□□□ -1.41
TOPBP1-202ENST00000503338 BAHCC1Q9P281 2608 aa6.23□□□□□ -1.41
TOPBP1-202ENST00000503338 IGHV7-4-1A0A0J9YVY3 117 aa6.23□□□□□ -1.41
TOPBP1-202ENST00000503338 PGPA6NDG6 321 aa6.23□□□□□ -1.41
TOPBP1-202ENST00000503338 HELTA6NFD8 242 aa6.23□□□□□ -1.41
TOPBP1-202ENST00000503338 ZNF785A8K8V0 405 aa6.23□□□□□ -1.41
TOPBP1-202ENST00000503338 ZNF727A8MUV8 499 aa6.23□□□□□ -1.41
TOPBP1-202ENST00000503338 M0QZ24 198 aa6.23□□□□□ -1.41
TOPBP1-202ENST00000503338 MRPS12O15235 138 aaKnown RBP6.23□□□□□ -1.41
TOPBP1-202ENST00000503338 ADCYAP1P18509 176 aa6.23□□□□□ -1.41
TOPBP1-202ENST00000503338 MYCNOSP40205 109 aa6.23□□□□□ -1.41
TOPBP1-202ENST00000503338 CSN1S1P47710 185 aa6.23□□□□□ -1.41
TOPBP1-202ENST00000503338 ATP5G3P48201 142 aa6.23□□□□□ -1.41
TOPBP1-202ENST00000503338 CEBPGP53567 150 aa6.23□□□□□ -1.41
TOPBP1-202ENST00000503338 PROK1P58294 105 aa6.23□□□□□ -1.41
TOPBP1-202ENST00000503338 FOXL1Q12952 345 aa6.23□□□□□ -1.41
TOPBP1-202ENST00000503338 FAM90A2PQ658T7 463 aa6.23□□□□□ -1.41
TOPBP1-202ENST00000503338 C16orf54Q6UWD8 224 aa6.23□□□□□ -1.41
TOPBP1-202ENST00000503338 KLHL30-AS1Q8NEE0 82 aa6.23□□□□□ -1.41
TOPBP1-202ENST00000503338 BLNKQ8WV28 456 aa6.23□□□□□ -1.41
TOPBP1-202ENST00000503338 OR5B12Q96R08 314 aa6.23□□□□□ -1.41
TOPBP1-202ENST00000503338 PARLQ9H300 379 aa6.23□□□□□ -1.41
TOPBP1-202ENST00000503338 Q9H3A6 140 aa6.23□□□□□ -1.41
TOPBP1-202ENST00000503338 ZNF586Q9NXT0 402 aa6.23□□□□□ -1.41
TOPBP1-202ENST00000503338 PEMTQ9UBM1 199 aa6.23□□□□□ -1.41
TOPBP1-202ENST00000503338 NAT8Q9UHE5 227 aa6.23□□□□□ -1.41
TOPBP1-202ENST00000503338 MTORP42345 2549 aa6.22□□□□□ -1.41
TOPBP1-202ENST00000503338 IGHV4OR15-8A0A075B7B6 117 aa6.22□□□□□ -1.41
TOPBP1-202ENST00000503338 A0A087WW49 117 aa6.22□□□□□ -1.41
TOPBP1-202ENST00000503338 FBLL1A6NHQ2 334 aaKnown RBP6.22□□□□□ -1.41
TOPBP1-202ENST00000503338 B4DEV8 164 aa6.22□□□□□ -1.41
TOPBP1-202ENST00000503338 GGTLC3B5MD39 225 aa6.22□□□□□ -1.41
TOPBP1-202ENST00000503338 H3BQ15 152 aa6.22□□□□□ -1.41
TOPBP1-202ENST00000503338 K7EQM0 130 aa6.22□□□□□ -1.41
TOPBP1-202ENST00000503338 SLC25A5P05141 298 aaKnown RBP6.22□□□□□ -1.41
TOPBP1-202ENST00000503338 HOXD3P31249 432 aaPredicted RBP6.22□□□□□ -1.41
TOPBP1-202ENST00000503338 AKR1C3P42330 323 aa6.22□□□□□ -1.41
TOPBP1-202ENST00000503338 CNN1P51911 297 aaKnown RBP6.22□□□□□ -1.41
TOPBP1-202ENST00000503338 TAS2R60P59551 318 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms