RNA–Protein interactions for RNA: ENST00000503060.5

USP46-204, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5

Gene USP46, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-204ENST00000503060 SRSF12Q8WXF0 261 aaKnown RBP9.2□□□□□ -0.94
USP46-204ENST00000503060 BAALCQ8WXS3 180 aa9.2□□□□□ -0.94
USP46-204ENST00000503060 ZNF503Q96F45 646 aa9.2□□□□□ -0.94
USP46-204ENST00000503060 ARL2-SNX15V9GYD0 113 aa9.2□□□□□ -0.94
USP46-204ENST00000503060 PLXNB1O43157 2135 aa9.2□□□□□ -0.94
USP46-204ENST00000503060 A0A1W2PRD5 423 aa9.2□□□□□ -0.94
USP46-204ENST00000503060 A0A1W2PRF3 423 aa9.2□□□□□ -0.94
USP46-204ENST00000503060 A0A1W2PRM7 423 aa9.2□□□□□ -0.94
USP46-204ENST00000503060 H7BYZ3 331 aa9.2□□□□□ -0.94
USP46-204ENST00000503060 TYMSP04818 313 aa9.2□□□□□ -0.94
USP46-204ENST00000503060 C8orf88P0DMB2 117 aa9.2□□□□□ -0.94
USP46-204ENST00000503060 ZNF90Q03938 601 aa9.2□□□□□ -0.94
USP46-204ENST00000503060 MMDQ15546 238 aa9.2□□□□□ -0.94
USP46-204ENST00000503060 VMO1Q7Z5L0 202 aa9.2□□□□□ -0.94
USP46-204ENST00000503060 SIGMAR1Q99720 223 aa9.2□□□□□ -0.94
USP46-204ENST00000503060 SLC25A33Q9BSK2 321 aa9.2□□□□□ -0.94
USP46-204ENST00000503060 F11RQ9Y624 299 aaKnown RBP9.2□□□□□ -0.94
USP46-204ENST00000503060 AZU1P20160 251 aa9.19□□□□□ -0.94
USP46-204ENST00000503060 IGFBPL1Q8WX77 278 aa9.19□□□□□ -0.94
USP46-204ENST00000503060 C11orf52Q96A22 123 aa9.19□□□□□ -0.94
USP46-204ENST00000503060 UHRF2Q96PU4 802 aa9.19□□□□□ -0.94
USP46-204ENST00000503060 LRBAP50851 2863 aa9.19□□□□□ -0.94
USP46-204ENST00000503060 TRBV24-1A0A075B6N3 115 aa9.19□□□□□ -0.94
USP46-204ENST00000503060 COX7A2P2O60397 106 aa9.19□□□□□ -0.94
USP46-204ENST00000503060 MOSP00540 346 aa9.19□□□□□ -0.94
USP46-204ENST00000503060 RUSC1-AS1Q66K80 236 aa9.19□□□□□ -0.94
USP46-204ENST00000503060 SPANXA1Q9NS26 97 aa9.19□□□□□ -0.94
USP46-204ENST00000503060 G3V4G9 280 aa9.18□□□□□ -0.94
USP46-204ENST00000503060 PFN1P07737 140 aaKnown RBP9.18□□□□□ -0.94
USP46-204ENST00000503060 HOXB4P17483 251 aaPredicted RBP9.18□□□□□ -0.94
USP46-204ENST00000503060 PATE2Q6UY27 113 aa9.18□□□□□ -0.94
USP46-204ENST00000503060 NPBQ8NG41 125 aa9.18□□□□□ -0.94
USP46-204ENST00000503060 OR4X1Q8NH49 305 aa9.18□□□□□ -0.94
USP46-204ENST00000503060 FAM167A-AS1Q96KT0 104 aa9.18□□□□□ -0.94
USP46-204ENST00000503060 RCHY1Q96PM5 261 aa9.18□□□□□ -0.94
USP46-204ENST00000503060 TNFRSF19Q9NS68 423 aa9.18□□□□□ -0.94
USP46-204ENST00000503060 TRBV20OR9-2A0A075B6H5 130 aa9.17□□□□□ -0.94
USP46-204ENST00000503060 TRAV5A0A0B4J249 113 aa9.17□□□□□ -0.94
USP46-204ENST00000503060 OVOL3O00110 214 aa9.17□□□□□ -0.94
USP46-204ENST00000503060 NDUFA3O95167 84 aa9.17□□□□□ -0.94
USP46-204ENST00000503060 GALR1P47211 349 aa9.17□□□□□ -0.94
USP46-204ENST00000503060 MORN5Q5VZ52 161 aa9.17□□□□□ -0.94
USP46-204ENST00000503060 C10orf113Q5VZT2 155 aa9.17□□□□□ -0.94
USP46-204ENST00000503060 TRGV9Q99603 122 aa9.17□□□□□ -0.94
USP46-204ENST00000503060 SLC25A2Q9BXI2 301 aa9.17□□□□□ -0.94
USP46-204ENST00000503060 DCHS2Q6V1P9 2916 aa9.17□□□□□ -0.94
USP46-204ENST00000503060 IGHV3-21A0A0B4J1V1 117 aa9.17□□□□□ -0.94
USP46-204ENST00000503060 OOSP1A8MZH6 123 aa9.17□□□□□ -0.94
USP46-204ENST00000503060 PHOX2AO14813 284 aa9.17□□□□□ -0.94
USP46-204ENST00000503060 CD24P25063 80 aa9.17□□□□□ -0.94
USP46-204ENST00000503060 TCL1AP56279 114 aa9.17□□□□□ -0.94
USP46-204ENST00000503060 MINOS1Q5TGZ0 78 aa9.17□□□□□ -0.94
USP46-204ENST00000503060 DYNAPQ8N1N2 210 aa9.17□□□□□ -0.94
USP46-204ENST00000503060 OR10D4PQ8NGN7 298 aa9.17□□□□□ -0.94
USP46-204ENST00000503060 PYGO2Q9BRQ0 406 aa9.17□□□□□ -0.94
USP46-204ENST00000503060 AURKAIP1Q9NWT8 199 aaPredicted RBP9.17□□□□□ -0.94
USP46-204ENST00000503060 MINOS1-NBL1R4GNA1 71 aa9.17□□□□□ -0.94
USP46-204ENST00000503060 A0A087WWL8 130 aa9.16□□□□□ -0.94
USP46-204ENST00000503060 LMO4P61968 165 aa9.16□□□□□ -0.94
USP46-204ENST00000503060 HES1Q14469 280 aa9.16□□□□□ -0.94
USP46-204ENST00000503060 OR5AU1Q8NGC0 362 aa9.16□□□□□ -0.94
USP46-204ENST00000503060 OR2T10Q8NGZ9 312 aa9.16□□□□□ -0.94
USP46-204ENST00000503060 BPESC1Q9GZL8 116 aa9.16□□□□□ -0.94
USP46-204ENST00000503060 ZNF355PQ9NSJ1 428 aa9.16□□□□□ -0.94
USP46-204ENST00000503060 CENPVL3A0A0U1RRI6 287 aa9.16□□□□□ -0.94
USP46-204ENST00000503060 CD99P14209 185 aa9.16□□□□□ -0.94
USP46-204ENST00000503060 NIT1Q86X76 327 aa9.16□□□□□ -0.94
USP46-204ENST00000503060 WNT10AQ9GZT5 417 aa9.16□□□□□ -0.94
USP46-204ENST00000503060 HSPB8Q9UJY1 196 aa9.16□□□□□ -0.94
USP46-204ENST00000503060 A0A1W2PRE2 83 aa9.15□□□□□ -0.94
USP46-204ENST00000503060 HSBP1O75506 76 aa9.15□□□□□ -0.94
USP46-204ENST00000503060 TRGC2P03986 189 aa9.15□□□□□ -0.94
USP46-204ENST00000503060 UBE2L3P68036 154 aaKnown RBP9.15□□□□□ -0.94
USP46-204ENST00000503060 IFITM10A6NMD0 228 aa9.15□□□□□ -0.94
USP46-204ENST00000503060 GGTLC3B5MD39 225 aa9.15□□□□□ -0.94
USP46-204ENST00000503060 C9JCJ5 164 aa9.15□□□□□ -0.94
USP46-204ENST00000503060 I3L2K1 104 aa9.15□□□□□ -0.94
USP46-204ENST00000503060 IGHV4-39P01824 125 aa9.15□□□□□ -0.94
USP46-204ENST00000503060 SRP14P37108 136 aaKnown RBP9.15□□□□□ -0.94
USP46-204ENST00000503060 FXYD3Q14802 87 aa9.15□□□□□ -0.94
USP46-204ENST00000503060 MDFIC2A0A1B0GVS7 189 aa9.14□□□□□ -0.95
USP46-204ENST00000503060 CRYBB3P26998 211 aa9.14□□□□□ -0.95
USP46-204ENST00000503060 JOSD1Q15040 202 aaPredicted RBP9.14□□□□□ -0.95
USP46-204ENST00000503060 Q8N6K4 173 aa9.14□□□□□ -0.95
USP46-204ENST00000503060 TBX15Q96SF7 602 aa9.14□□□□□ -0.95
USP46-204ENST00000503060 PAXXQ9BUH6 204 aa9.14□□□□□ -0.95
USP46-204ENST00000503060 A0A087X0K7 114 aa9.14□□□□□ -0.95
USP46-204ENST00000503060 PYYP10082 97 aa9.14□□□□□ -0.95
USP46-204ENST00000503060 ORM2P19652 201 aa9.14□□□□□ -0.95
USP46-204ENST00000503060 IER3P46695 156 aa9.14□□□□□ -0.95
USP46-204ENST00000503060 TCTAP57738 103 aa9.14□□□□□ -0.95
USP46-204ENST00000503060 RHOGP84095 191 aa9.14□□□□□ -0.95
USP46-204ENST00000503060 EBI3Q14213 229 aa9.14□□□□□ -0.95
USP46-204ENST00000503060 LINC00305Q7Z4B0 112 aa9.14□□□□□ -0.95
USP46-204ENST00000503060 OR1B1Q8NGR6 318 aa9.14□□□□□ -0.95
USP46-204ENST00000503060 LY96Q9Y6Y9 160 aa9.14□□□□□ -0.95
USP46-204ENST00000503060 HIST1H2BKO60814 126 aa9.13□□□□□ -0.95
USP46-204ENST00000503060 HIST1H2BJP06899 126 aa9.13□□□□□ -0.95
USP46-204ENST00000503060 HIST1H2BOP23527 126 aa9.13□□□□□ -0.95
USP46-204ENST00000503060 HIST1H2BBP33778 126 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms