RNA–Protein interactions for RNA: ENST00000502781.5

LSM6-202, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-202ENST00000502781 DNAJC4Q9NNZ3 241 aa18.62■□□□□ 0.57
LSM6-202ENST00000502781 TNFSF18Q9UNG2 199 aa18.62■□□□□ 0.57
LSM6-202ENST00000502781 GALR1P47211 349 aa18.61■□□□□ 0.57
LSM6-202ENST00000502781 C10orf113Q5VZT2 155 aa18.61■□□□□ 0.57
LSM6-202ENST00000502781 APRG1Q8IVJ8 170 aa18.61■□□□□ 0.57
LSM6-202ENST00000502781 OR1L4Q8NGR5 311 aa18.61■□□□□ 0.57
LSM6-202ENST00000502781 RNF24Q9Y225 148 aa18.61■□□□□ 0.57
LSM6-202ENST00000502781 SOCS3O14543 225 aa18.6■□□□□ 0.57
LSM6-202ENST00000502781 DEFB131AP59861 70 aa18.6■□□□□ 0.57
LSM6-202ENST00000502781 ASCL2Q99929 193 aa18.6■□□□□ 0.57
LSM6-202ENST00000502781 FXYD6-FXYD2A0A087WZ82 144 aa18.59■□□□□ 0.57
LSM6-202ENST00000502781 MRPS12O15235 138 aaKnown RBP18.59■□□□□ 0.57
LSM6-202ENST00000502781 IFNA5P01569 189 aa18.59■□□□□ 0.57
LSM6-202ENST00000502781 NHLRC4P0CG21 123 aaPredicted RBP18.59■□□□□ 0.57
LSM6-202ENST00000502781 RPL7P18124 248 aaKnown RBP18.59■□□□□ 0.57
LSM6-202ENST00000502781 ZNF124Q15973 351 aa18.59■□□□□ 0.57
LSM6-202ENST00000502781 HAGHQ16775 308 aa18.59■□□□□ 0.57
LSM6-202ENST00000502781 MORN5Q5VZ52 161 aa18.59■□□□□ 0.57
LSM6-202ENST00000502781 PFDN5Q99471 154 aa18.59■□□□□ 0.57
LSM6-202ENST00000502781 KCNIP2Q9NS61 270 aa18.59■□□□□ 0.57
LSM6-202ENST00000502781 ZNF688P0C7X2 276 aa18.58■□□□□ 0.57
LSM6-202ENST00000502781 INO80EQ8NBZ0 244 aaPredicted RBP18.58■□□□□ 0.57
LSM6-202ENST00000502781 GATAD1Q8WUU5 269 aa18.58■□□□□ 0.57
LSM6-202ENST00000502781 RSG1Q9BU20 258 aa18.58■□□□□ 0.57
LSM6-202ENST00000502781 C17orf112F2Z3M2 114 aa18.57■□□□□ 0.56
LSM6-202ENST00000502781 MEOX2P50222 304 aa18.57■□□□□ 0.56
LSM6-202ENST00000502781 ZNF709Q8N972 641 aa18.57■□□□□ 0.56
LSM6-202ENST00000502781 SMLR1H3BR10 107 aa18.56■□□□□ 0.56
LSM6-202ENST00000502781 GCSAMLQ5JQS6 135 aa18.56■□□□□ 0.56
LSM6-202ENST00000502781 SAMD13Q5VXD3 122 aa18.56■□□□□ 0.56
LSM6-202ENST00000502781 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa18.56■□□□□ 0.56
LSM6-202ENST00000502781 TM2D3Q9BRN9 247 aa18.56■□□□□ 0.56
LSM6-202ENST00000502781 LOC102724200A0A096LPH7 203 aaPredicted RBP18.55■□□□□ 0.56
LSM6-202ENST00000502781 SNRPD3P62318 126 aaKnown RBP18.55■□□□□ 0.56
LSM6-202ENST00000502781 SCGB1C1Q8TD33 95 aa18.55■□□□□ 0.56
LSM6-202ENST00000502781 A0A087X0K7 114 aa18.55■□□□□ 0.56
LSM6-202ENST00000502781 ISLRO14498 428 aa18.55■□□□□ 0.56
LSM6-202ENST00000502781 PSMB3P49720 205 aa18.55■□□□□ 0.56
LSM6-202ENST00000502781 ZNF266Q14584 549 aa18.55■□□□□ 0.56
LSM6-202ENST00000502781 PSMG4Q5JS54 123 aa18.55■□□□□ 0.56
LSM6-202ENST00000502781 HUWE1Q7Z6Z7 4374 aaKnown RBP18.54■□□□□ 0.56
LSM6-202ENST00000502781 ID1P41134 155 aa18.53■□□□□ 0.56
LSM6-202ENST00000502781 BPIFA4PQ86YQ2 179 aa18.53■□□□□ 0.56
LSM6-202ENST00000502781 ST6GAL2Q96JF0 529 aa18.53■□□□□ 0.56
LSM6-202ENST00000502781 TRAV5A0A0B4J249 113 aa18.52■□□□□ 0.55
LSM6-202ENST00000502781 KIR2DL5BA0A0G2JN68 375 aa18.52■□□□□ 0.55
LSM6-202ENST00000502781 KIR2DL5BA0A0G2JPC4 375 aa18.52■□□□□ 0.55
LSM6-202ENST00000502781 ATF4P18848 351 aaPredicted RBP18.52■□□□□ 0.55
LSM6-202ENST00000502781 KIR2DL5AQ8N109 375 aa18.52■□□□□ 0.55
LSM6-202ENST00000502781 OR11H4Q8NGC9 324 aa18.52■□□□□ 0.55
LSM6-202ENST00000502781 KIR2DL5BQ8NHK3 375 aa18.52■□□□□ 0.55
LSM6-202ENST00000502781 TIMM9Q9Y5J7 89 aa18.52■□□□□ 0.55
LSM6-202ENST00000502781 COL7A1Q02388 2944 aa18.51■□□□□ 0.55
LSM6-202ENST00000502781 ARPC5O15511 151 aa18.51■□□□□ 0.55
LSM6-202ENST00000502781 TRAV8-2A0A0B4J237 113 aa18.5■□□□□ 0.55
LSM6-202ENST00000502781 HMSDA8MTL9 139 aa18.5■□□□□ 0.55
LSM6-202ENST00000502781 IGLC2P0DOY2 106 aa18.5■□□□□ 0.55
LSM6-202ENST00000502781 FAM78BQ5VT40 261 aa18.5■□□□□ 0.55
LSM6-202ENST00000502781 C16orf92Q96LL3 132 aa18.5■□□□□ 0.55
LSM6-202ENST00000502781 RFNGQ9Y644 331 aa18.5■□□□□ 0.55
LSM6-202ENST00000502781 FFAR4Q5NUL3 377 aa18.49■□□□□ 0.55
LSM6-202ENST00000502781 TRPT1Q86TN4 253 aaKnown RBP18.49■□□□□ 0.55
LSM6-202ENST00000502781 SPATA25Q9BR10 227 aa18.49■□□□□ 0.55
LSM6-202ENST00000502781 MFFQ9GZY8 342 aa18.49■□□□□ 0.55
LSM6-202ENST00000502781 TMEM14CQ9P0S9 112 aa18.49■□□□□ 0.55
LSM6-202ENST00000502781 KNCNA6PVL3 124 aa18.48■□□□□ 0.55
LSM6-202ENST00000502781 RPL35AP18077 110 aaKnown RBP18.48■□□□□ 0.55
LSM6-202ENST00000502781 CXCL2P19875 107 aa18.48■□□□□ 0.55
LSM6-202ENST00000502781 APOC4P55056 127 aa18.48■□□□□ 0.55
LSM6-202ENST00000502781 ZNF345Q14585 488 aa18.48■□□□□ 0.55
LSM6-202ENST00000502781 SPATA31B1PQ5VZV4 182 aa18.48■□□□□ 0.55
LSM6-202ENST00000502781 C20orf173Q96LM9 149 aa18.48■□□□□ 0.55
LSM6-202ENST00000502781 MRPL32Q9BYC8 188 aaKnown RBP18.48■□□□□ 0.55
LSM6-202ENST00000502781 HRH4Q9H3N8 390 aa18.48■□□□□ 0.55
LSM6-202ENST00000502781 RPL7L1Q6DKI1 246 aaKnown RBP18.47■□□□□ 0.55
LSM6-202ENST00000502781 STHQ8IWL8 128 aa18.47■□□□□ 0.55
LSM6-202ENST00000502781 HSD17B11Q8NBQ5 300 aa18.47■□□□□ 0.55
LSM6-202ENST00000502781 OR2G3Q8NGZ4 309 aa18.47■□□□□ 0.55
LSM6-202ENST00000502781 FAM167A-AS1Q96KT0 104 aa18.47■□□□□ 0.55
LSM6-202ENST00000502781 LINC00052Q96N35 136 aa18.47■□□□□ 0.55
LSM6-202ENST00000502781 PSMG3Q9BT73 122 aaPredicted RBP18.47■□□□□ 0.55
LSM6-202ENST00000502781 ZMAT4Q9H898 229 aa18.47■□□□□ 0.55
LSM6-202ENST00000502781 STAB2Q8WWQ8 2551 aa18.47■□□□□ 0.55
LSM6-202ENST00000502781 TENM3Q9P273 2699 aa18.47■□□□□ 0.55
LSM6-202ENST00000502781 H3BQ15 152 aa18.46■□□□□ 0.55
LSM6-202ENST00000502781 UBE2CO00762 179 aa18.46■□□□□ 0.55
LSM6-202ENST00000502781 TAAR5O14804 337 aa18.46■□□□□ 0.55
LSM6-202ENST00000502781 ATP6V0CP27449 155 aa18.46■□□□□ 0.55
LSM6-202ENST00000502781 ACTL10Q5JWF8 245 aa18.46■□□□□ 0.55
LSM6-202ENST00000502781 LCN15Q6UWW0 184 aa18.46■□□□□ 0.55
LSM6-202ENST00000502781 MIR17HGQ75NE6 70 aa18.46■□□□□ 0.55
LSM6-202ENST00000502781 TCTE3Q8IZS6 198 aa18.46■□□□□ 0.55
LSM6-202ENST00000502781 SAT2Q96F10 170 aaPredicted RBP18.46■□□□□ 0.55
LSM6-202ENST00000502781 SLC25A2Q9BXI2 301 aa18.46■□□□□ 0.55
LSM6-202ENST00000502781 FUT9Q9Y231 359 aa18.46■□□□□ 0.55
LSM6-202ENST00000502781 U3KQK5 164 aa18.46■□□□□ 0.55
LSM6-202ENST00000502781 AGRNO00468 2067 aa18.46■□□□□ 0.55
LSM6-202ENST00000502781 FOXI2Q6ZQN5 318 aa18.45■□□□□ 0.54
LSM6-202ENST00000502781 KCNRGQ8N5I3 272 aa18.45■□□□□ 0.54
LSM6-202ENST00000502781 CSTL1Q9H114 145 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms