RNA–Protein interactions for RNA: ENST00000502639.1

CDC42SE2-204, Transcript of CDC42 small effector 2, humanhuman

TSL 3

Gene CDC42SE2, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-204ENST00000502639 ST6GALNAC3Q8NDV1 305 aa0.45□□□□□ -2.34
CDC42SE2-204ENST00000502639 BORCS5Q969J3 196 aa0.45□□□□□ -2.34
CDC42SE2-204ENST00000502639 ZHX1-C8orf76Q96EF9 292 aa0.45□□□□□ -2.34
CDC42SE2-204ENST00000502639 CEP19Q96LK0 163 aa0.45□□□□□ -2.34
CDC42SE2-204ENST00000502639 NPCDR1Q9BY65 106 aa0.45□□□□□ -2.34
CDC42SE2-204ENST00000502639 CEP164Q9UPV0 1460 aa0.45□□□□□ -2.34
CDC42SE2-204ENST00000502639 NUP210LQ5VU65 1888 aa0.45□□□□□ -2.34
CDC42SE2-204ENST00000502639 APCP25054 2843 aa0.45□□□□□ -2.34
CDC42SE2-204ENST00000502639 MED12Q93074 2177 aa0.45□□□□□ -2.34
CDC42SE2-204ENST00000502639 N4BP2Q86UW6 1770 aaPredicted RBP0.45□□□□□ -2.34
CDC42SE2-204ENST00000502639 TRGV10A0A0A0MS01 117 aa0.44□□□□□ -2.34
CDC42SE2-204ENST00000502639 TRAV10A0A0B4J240 114 aa0.44□□□□□ -2.34
CDC42SE2-204ENST00000502639 PHGR1C9JFL3 82 aa0.44□□□□□ -2.34
CDC42SE2-204ENST00000502639 MFSD11O43934 449 aa0.44□□□□□ -2.34
CDC42SE2-204ENST00000502639 IFNA7P01567 189 aa0.44□□□□□ -2.34
CDC42SE2-204ENST00000502639 EFNA4P52798 201 aa0.44□□□□□ -2.34
CDC42SE2-204ENST00000502639 ARPP19P56211 112 aa0.44□□□□□ -2.34
CDC42SE2-204ENST00000502639 MRPS25P82663 173 aaKnown RBP0.44□□□□□ -2.34
CDC42SE2-204ENST00000502639 FAM74A1Q5RGS3 127 aa0.44□□□□□ -2.34
CDC42SE2-204ENST00000502639 ZNF833PQ6ZTB9 187 aa0.44□□□□□ -2.34
CDC42SE2-204ENST00000502639 SMIM20Q8N5G0 67 aa0.44□□□□□ -2.34
CDC42SE2-204ENST00000502639 TMEM254Q8TBM7 123 aa0.44□□□□□ -2.34
CDC42SE2-204ENST00000502639 TEX47Q8TBZ9 253 aa0.44□□□□□ -2.34
CDC42SE2-204ENST00000502639 POP5Q969H6 163 aaKnown RBP0.44□□□□□ -2.34
CDC42SE2-204ENST00000502639 CARD19Q96LW7 228 aa0.44□□□□□ -2.34
CDC42SE2-204ENST00000502639 LINC00052Q96N35 136 aa0.44□□□□□ -2.34
CDC42SE2-204ENST00000502639 GPER1Q99527 375 aa0.44□□□□□ -2.34
CDC42SE2-204ENST00000502639 IMUPQ9GZP8 106 aa0.44□□□□□ -2.34
CDC42SE2-204ENST00000502639 PSTPIP2Q9H939 334 aa0.44□□□□□ -2.34
CDC42SE2-204ENST00000502639 ARL5AQ9Y689 179 aa0.44□□□□□ -2.34
CDC42SE2-204ENST00000502639 PHRF1Q9P1Y6 1649 aaKnown RBP0.44□□□□□ -2.34
CDC42SE2-204ENST00000502639 USP24Q9UPU5 2620 aa0.44□□□□□ -2.34
CDC42SE2-204ENST00000502639 MYO18AQ92614 2054 aaKnown RBP0.44□□□□□ -2.34
CDC42SE2-204ENST00000502639 CITO14578 2027 aa0.43□□□□□ -2.34
CDC42SE2-204ENST00000502639 FRAS1Q86XX4 4008 aa0.43□□□□□ -2.34
CDC42SE2-204ENST00000502639 MYH2Q9UKX2 1941 aa0.43□□□□□ -2.34
CDC42SE2-204ENST00000502639 IGHV1-58A0A0C4DH39 117 aa0.43□□□□□ -2.34
CDC42SE2-204ENST00000502639 A8MWV9 139 aa0.43□□□□□ -2.34
CDC42SE2-204ENST00000502639 E7EUB6 86 aa0.43□□□□□ -2.34
CDC42SE2-204ENST00000502639 NCR3O14931 201 aa0.43□□□□□ -2.34
CDC42SE2-204ENST00000502639 HLA-EP13747 358 aa0.43□□□□□ -2.34
CDC42SE2-204ENST00000502639 TMBIM6P55061 237 aa0.43□□□□□ -2.34
CDC42SE2-204ENST00000502639 BASP1P80723 227 aaKnown RBP0.43□□□□□ -2.34
CDC42SE2-204ENST00000502639 PSG9Q00887 426 aa0.43□□□□□ -2.34
CDC42SE2-204ENST00000502639 BCL2L15Q5TBC7 163 aa0.43□□□□□ -2.34
CDC42SE2-204ENST00000502639 TMEM14EPQ6UXP3 125 aa0.43□□□□□ -2.34
CDC42SE2-204ENST00000502639 OR5D14Q8NGL3 314 aa0.43□□□□□ -2.34
CDC42SE2-204ENST00000502639 RAB37Q96AX2 223 aa0.43□□□□□ -2.34
CDC42SE2-204ENST00000502639 YPEL2Q96QA6 119 aa0.43□□□□□ -2.34
CDC42SE2-204ENST00000502639 GPX7Q96SL4 187 aaPredicted RBP0.43□□□□□ -2.34
CDC42SE2-204ENST00000502639 HOPXQ9BPY8 73 aaPredicted RBP0.43□□□□□ -2.34
CDC42SE2-204ENST00000502639 PYCARDQ9ULZ3 195 aa0.43□□□□□ -2.34
CDC42SE2-204ENST00000502639 ASCC3Q8N3C0 2202 aaKnown RBP0.42□□□□□ -2.34
CDC42SE2-204ENST00000502639 MYH3P11055 1940 aa0.42□□□□□ -2.34
CDC42SE2-204ENST00000502639 G3V2T6 193 aa0.42□□□□□ -2.34
CDC42SE2-204ENST00000502639 ATG12O94817 140 aa0.42□□□□□ -2.34
CDC42SE2-204ENST00000502639 CSN2P05814 226 aa0.42□□□□□ -2.34
CDC42SE2-204ENST00000502639 G0S2P27469 103 aa0.42□□□□□ -2.34
CDC42SE2-204ENST00000502639 PPP1R2P41236 205 aa0.42□□□□□ -2.34
CDC42SE2-204ENST00000502639 DSCR4P56555 118 aaPredicted RBP0.42□□□□□ -2.34
CDC42SE2-204ENST00000502639 TMED2Q15363 201 aa0.42□□□□□ -2.34
CDC42SE2-204ENST00000502639 EIF5AL1Q6IS14 154 aaKnown RBP0.42□□□□□ -2.34
CDC42SE2-204ENST00000502639 PPP1R2P3Q6NXS1 205 aa0.42□□□□□ -2.34
CDC42SE2-204ENST00000502639 LINC00322Q6ZN03 302 aaPredicted RBP0.42□□□□□ -2.34
CDC42SE2-204ENST00000502639 CANT1Q8WVQ1 401 aa0.42□□□□□ -2.34
CDC42SE2-204ENST00000502639 GINS3Q9BRX5 216 aa0.42□□□□□ -2.34
CDC42SE2-204ENST00000502639 POPDC3Q9HBV1 291 aa0.42□□□□□ -2.34
CDC42SE2-204ENST00000502639 RNF11Q9Y3C5 154 aa0.42□□□□□ -2.34
CDC42SE2-204ENST00000502639 KMT2DO14686 5537 aa0.42□□□□□ -2.34
CDC42SE2-204ENST00000502639 PTPRFP10586 1907 aa0.42□□□□□ -2.34
CDC42SE2-204ENST00000502639 CECR2Q9BXF3 1484 aa0.41□□□□□ -2.34
CDC42SE2-204ENST00000502639 FREM3P0C091 2139 aa0.41□□□□□ -2.34
CDC42SE2-204ENST00000502639 DUXBA0A1W2PPF3 345 aa0.41□□□□□ -2.34
CDC42SE2-204ENST00000502639 M0R233 179 aa0.41□□□□□ -2.34
CDC42SE2-204ENST00000502639 NUPR1O60356 82 aa0.41□□□□□ -2.34
CDC42SE2-204ENST00000502639 NDUFC2O95298 119 aa0.41□□□□□ -2.34
CDC42SE2-204ENST00000502639 TRGC2P03986 189 aa0.41□□□□□ -2.34
CDC42SE2-204ENST00000502639 PHBP35232 272 aa0.41□□□□□ -2.34
CDC42SE2-204ENST00000502639 TAS2R41P59536 307 aa0.41□□□□□ -2.34
CDC42SE2-204ENST00000502639 ARF6P62330 175 aa0.41□□□□□ -2.34
CDC42SE2-204ENST00000502639 GNG3P63215 75 aa0.41□□□□□ -2.34
CDC42SE2-204ENST00000502639 LTC4SQ16873 150 aa0.41□□□□□ -2.34
CDC42SE2-204ENST00000502639 C4orf22Q6V702 233 aa0.41□□□□□ -2.34
CDC42SE2-204ENST00000502639 GRINAQ7Z429 371 aa0.41□□□□□ -2.34
CDC42SE2-204ENST00000502639 LYG2Q86SG7 212 aa0.41□□□□□ -2.34
CDC42SE2-204ENST00000502639 OR4K15Q8NH41 348 aa0.41□□□□□ -2.34
CDC42SE2-204ENST00000502639 C4orf3Q8WVX3 66 aa0.41□□□□□ -2.34
CDC42SE2-204ENST00000502639 AP3S1Q92572 193 aa0.41□□□□□ -2.34
CDC42SE2-204ENST00000502639 CHCHD1Q96BP2 118 aaKnown RBP0.41□□□□□ -2.34
CDC42SE2-204ENST00000502639 TEX37Q96LM6 180 aa0.41□□□□□ -2.34
CDC42SE2-204ENST00000502639 TP53RKQ96S44 253 aa0.41□□□□□ -2.34
CDC42SE2-204ENST00000502639 LYSMD1Q96S90 227 aa0.41□□□□□ -2.34
CDC42SE2-204ENST00000502639 TMEM70Q9BUB7 260 aa0.41□□□□□ -2.34
CDC42SE2-204ENST00000502639 OR2J1Q9GZK6 312 aa0.41□□□□□ -2.34
CDC42SE2-204ENST00000502639 ORMDL1Q9P0S3 153 aa0.41□□□□□ -2.34
CDC42SE2-204ENST00000502639 TMEM14CQ9P0S9 112 aa0.41□□□□□ -2.34
CDC42SE2-204ENST00000502639 LY96Q9Y6Y9 160 aa0.41□□□□□ -2.34
CDC42SE2-204ENST00000502639 COL24A1Q17RW2 1714 aa0.41□□□□□ -2.34
CDC42SE2-204ENST00000502639 SIP14410 1827 aa0.41□□□□□ -2.34
CDC42SE2-204ENST00000502639 C9orf170A2RU37 121 aa0.4□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms