RNA–Protein interactions for RNA: ENST00000498495.1

HSPG2-213, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-213ENST00000498495 SCRT1Q9BWW7 348 aa9.39□□□□□ -0.91
HSPG2-213ENST00000498495 OR5AC2Q9NZP5 309 aa9.39□□□□□ -0.91
HSPG2-213ENST00000498495 WDR83OSQ9Y284 106 aa9.39□□□□□ -0.91
HSPG2-213ENST00000498495 H0YIZ8 118 aa9.38□□□□□ -0.91
HSPG2-213ENST00000498495 ISLRO14498 428 aa9.38□□□□□ -0.91
HSPG2-213ENST00000498495 SPP1P10451 314 aa9.38□□□□□ -0.91
HSPG2-213ENST00000498495 ATF4P18848 351 aaPredicted RBP9.38□□□□□ -0.91
HSPG2-213ENST00000498495 NUTF2P61970 127 aaKnown RBP9.38□□□□□ -0.91
HSPG2-213ENST00000498495 BAXQ07812 192 aa9.38□□□□□ -0.91
HSPG2-213ENST00000498495 VWC2Q2TAL6 325 aa9.38□□□□□ -0.91
HSPG2-213ENST00000498495 TMEM41BQ5BJD5 291 aa9.38□□□□□ -0.91
HSPG2-213ENST00000498495 ZFAND6Q6FIF0 208 aa9.38□□□□□ -0.91
HSPG2-213ENST00000498495 ELOA3CA0A087WX78 387 aaPredicted RBP9.37□□□□□ -0.91
HSPG2-213ENST00000498495 A0A0J9YWU9 116 aa9.37□□□□□ -0.91
HSPG2-213ENST00000498495 UBE2L5PA0A1B0GUS4 154 aa9.37□□□□□ -0.91
HSPG2-213ENST00000498495 H3BMM0 161 aa9.37□□□□□ -0.91
HSPG2-213ENST00000498495 SOCS3O14543 225 aa9.37□□□□□ -0.91
HSPG2-213ENST00000498495 COX7A2P2O60397 106 aa9.37□□□□□ -0.91
HSPG2-213ENST00000498495 EWSR1Q01844 656 aaKnown RBP eCLIP9.37□□□□□ -0.91
HSPG2-213ENST00000498495 MIC13Q5XKP0 118 aa9.37□□□□□ -0.91
HSPG2-213ENST00000498495 LINC00305Q7Z4B0 112 aa9.37□□□□□ -0.91
HSPG2-213ENST00000498495 OR5C1Q8NGR4 320 aa9.37□□□□□ -0.91
HSPG2-213ENST00000498495 OR11H2Q8NH07 326 aa9.37□□□□□ -0.91
HSPG2-213ENST00000498495 DNAJC4Q9NNZ3 241 aa9.37□□□□□ -0.91
HSPG2-213ENST00000498495 ALG5Q9Y673 324 aa9.37□□□□□ -0.91
HSPG2-213ENST00000498495 MPC2O95563 127 aa9.36□□□□□ -0.91
HSPG2-213ENST00000498495 PET100P0DJ07 73 aa9.36□□□□□ -0.91
HSPG2-213ENST00000498495 FGF7P21781 194 aa9.36□□□□□ -0.91
HSPG2-213ENST00000498495 RPL29P47914 159 aaKnown RBP9.36□□□□□ -0.91
HSPG2-213ENST00000498495 C10orf113Q5VZT2 155 aa9.36□□□□□ -0.91
HSPG2-213ENST00000498495 EBLN2Q6P2I7 272 aa9.36□□□□□ -0.91
HSPG2-213ENST00000498495 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.36□□□□□ -0.91
HSPG2-213ENST00000498495 FOXI2Q6ZQN5 318 aa9.36□□□□□ -0.91
HSPG2-213ENST00000498495 OR1L4Q8NGR5 311 aa9.36□□□□□ -0.91
HSPG2-213ENST00000498495 LRRC20Q8TCA0 184 aa9.36□□□□□ -0.91
HSPG2-213ENST00000498495 TMEM37Q8WXS4 190 aa9.36□□□□□ -0.91
HSPG2-213ENST00000498495 C17orf77Q96MU5 243 aa9.36□□□□□ -0.91
HSPG2-213ENST00000498495 RNF126Q9BV68 326 aa9.36□□□□□ -0.91
HSPG2-213ENST00000498495 SAV1Q9H4B6 383 aaPredicted RBP9.36□□□□□ -0.91
HSPG2-213ENST00000498495 RPRMQ9NS64 109 aa9.36□□□□□ -0.91
HSPG2-213ENST00000498495 MPDU1O75352 247 aa9.35□□□□□ -0.91
HSPG2-213ENST00000498495 IGKV3-20P01619 116 aa9.35□□□□□ -0.91
HSPG2-213ENST00000498495 HLA-DRB4P13762 266 aa9.35□□□□□ -0.91
HSPG2-213ENST00000498495 DEFB1P60022 68 aa9.35□□□□□ -0.91
HSPG2-213ENST00000498495 B2MP61769 119 aa9.35□□□□□ -0.91
HSPG2-213ENST00000498495 PRR20EP86478 221 aa9.35□□□□□ -0.91
HSPG2-213ENST00000498495 PRR20CP86479 221 aa9.35□□□□□ -0.91
HSPG2-213ENST00000498495 PRR20DP86480 221 aa9.35□□□□□ -0.91
HSPG2-213ENST00000498495 PRR20BP86481 221 aa9.35□□□□□ -0.91
HSPG2-213ENST00000498495 PRR20AP86496 221 aa9.35□□□□□ -0.91
HSPG2-213ENST00000498495 GDF5OSQ5U4N7 250 aa9.35□□□□□ -0.91
HSPG2-213ENST00000498495 SPATA31B1PQ5VZV4 182 aa9.35□□□□□ -0.91
HSPG2-213ENST00000498495 OR4B1Q8NGF8 309 aa9.35□□□□□ -0.91
HSPG2-213ENST00000498495 CHAC2Q8WUX2 184 aa9.35□□□□□ -0.91
HSPG2-213ENST00000498495 PFDN5Q99471 154 aa9.35□□□□□ -0.91
HSPG2-213ENST00000498495 C1QTNF4Q9BXJ3 329 aa9.35□□□□□ -0.91
HSPG2-213ENST00000498495 MED28Q9H204 178 aa9.35□□□□□ -0.91
HSPG2-213ENST00000498495 SLC39A9Q9NUM3 307 aa9.35□□□□□ -0.91
HSPG2-213ENST00000498495 HLA-DRB4X5D2U9 266 aa9.35□□□□□ -0.91
HSPG2-213ENST00000498495 AGRNO00468 2067 aa9.35□□□□□ -0.91
HSPG2-213ENST00000498495 GIG44P09565 113 aaPredicted RBP9.34□□□□□ -0.91
HSPG2-213ENST00000498495 C4BPBP20851 252 aa9.34□□□□□ -0.91
HSPG2-213ENST00000498495 CLINT1Q14677 625 aa9.34□□□□□ -0.91
HSPG2-213ENST00000498495 OPCMLQ14982 345 aa9.34□□□□□ -0.91
HSPG2-213ENST00000498495 IGFL4Q6B9Z1 124 aa9.34□□□□□ -0.91
HSPG2-213ENST00000498495 BPIFA4PQ86YQ2 179 aa9.34□□□□□ -0.91
HSPG2-213ENST00000498495 C20orf173Q96LM9 149 aa9.34□□□□□ -0.91
HSPG2-213ENST00000498495 CLEC5AQ9NY25 188 aa9.34□□□□□ -0.91
HSPG2-213ENST00000498495 PXMP4Q9Y6I8 212 aa9.34□□□□□ -0.91
HSPG2-213ENST00000498495 NBEAL2Q6ZNJ1 2754 aa9.34□□□□□ -0.91
HSPG2-213ENST00000498495 A0A087X0K7 114 aa9.33□□□□□ -0.92
HSPG2-213ENST00000498495 F6UB75 175 aa9.33□□□□□ -0.92
HSPG2-213ENST00000498495 CXCL3P19876 107 aa9.33□□□□□ -0.92
HSPG2-213ENST00000498495 RPL12P30050 165 aaKnown RBP9.33□□□□□ -0.92
HSPG2-213ENST00000498495 ZNF709Q8N972 641 aa9.33□□□□□ -0.92
HSPG2-213ENST00000498495 THAP6Q8TBB0 222 aa9.33□□□□□ -0.92
HSPG2-213ENST00000498495 NPCDR1Q9BY65 106 aa9.33□□□□□ -0.92
HSPG2-213ENST00000498495 XCL2Q9UBD3 114 aa9.33□□□□□ -0.92
HSPG2-213ENST00000498495 TENM3Q9P273 2699 aa9.32□□□□□ -0.92
HSPG2-213ENST00000498495 TRAV8-2A0A0B4J237 113 aa9.32□□□□□ -0.92
HSPG2-213ENST00000498495 A0A0J9YX75 114 aa9.32□□□□□ -0.92
HSPG2-213ENST00000498495 MRPS12O15235 138 aaKnown RBP9.32□□□□□ -0.92
HSPG2-213ENST00000498495 SNRPCP09234 159 aaKnown RBP9.32□□□□□ -0.92
HSPG2-213ENST00000498495 FXYD7P58549 80 aa9.32□□□□□ -0.92
HSPG2-213ENST00000498495 PSG9Q00887 426 aa9.32□□□□□ -0.92
HSPG2-213ENST00000498495 FCN2Q15485 313 aa9.32□□□□□ -0.92
HSPG2-213ENST00000498495 RGS21Q2M5E4 152 aa9.32□□□□□ -0.92
HSPG2-213ENST00000498495 FAM78BQ5VT40 261 aa9.32□□□□□ -0.92
HSPG2-213ENST00000498495 RNF182Q8N6D2 247 aa9.32□□□□□ -0.92
HSPG2-213ENST00000498495 CSNK1G2-AS1Q8NCQ2 148 aa9.32□□□□□ -0.92
HSPG2-213ENST00000498495 CLUHP3Q96NS8 147 aa9.32□□□□□ -0.92
HSPG2-213ENST00000498495 WDR61Q9GZS3 305 aaKnown RBP9.32□□□□□ -0.92
HSPG2-213ENST00000498495 MBD2Q9UBB5 411 aa9.32□□□□□ -0.92
HSPG2-213ENST00000498495 HSPB11Q9Y547 144 aa9.32□□□□□ -0.92
HSPG2-213ENST00000498495 TRAV5A0A0B4J249 113 aa9.31□□□□□ -0.92
HSPG2-213ENST00000498495 C17orf112F2Z3M2 114 aa9.31□□□□□ -0.92
HSPG2-213ENST00000498495 DUSP14O95147 198 aaKnown RBP9.31□□□□□ -0.92
HSPG2-213ENST00000498495 PSG3Q16557 428 aa9.31□□□□□ -0.92
HSPG2-213ENST00000498495 MORN5Q5VZ52 161 aa9.31□□□□□ -0.92
HSPG2-213ENST00000498495 LCN15Q6UWW0 184 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms