RNA–Protein interactions for RNA: ENST00000498438.1

HOXD11-202, Transcript of homeobox D11, humanhuman

TSL 1 (best)

Gene HOXD11, Length 1,259 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD11-202ENST00000498438 X6R8D5 127 aa13.35□□□□□ -0.27
HOXD11-202ENST00000498438 DEDDO75618 318 aa13.34□□□□□ -0.27
HOXD11-202ENST00000498438 IGKV3-20P01619 116 aa13.34□□□□□ -0.27
HOXD11-202ENST00000498438 OR5G3P0C626 314 aa13.34□□□□□ -0.27
HOXD11-202ENST00000498438 MIFP14174 115 aa13.34□□□□□ -0.27
HOXD11-202ENST00000498438 BCAP31P51572 246 aa13.34□□□□□ -0.27
HOXD11-202ENST00000498438 CAV2P51636 162 aa13.34□□□□□ -0.27
HOXD11-202ENST00000498438 IFITM3Q01628 133 aa13.34□□□□□ -0.27
HOXD11-202ENST00000498438 PHLDA1Q8WV24 401 aaPredicted RBP13.34□□□□□ -0.27
HOXD11-202ENST00000498438 C20orf173Q96LM9 149 aa13.34□□□□□ -0.27
HOXD11-202ENST00000498438 UHRF2Q96PU4 802 aa13.34□□□□□ -0.27
HOXD11-202ENST00000498438 C1QTNF4Q9BXJ3 329 aa13.34□□□□□ -0.27
HOXD11-202ENST00000498438 F6UB75 175 aa13.33□□□□□ -0.28
HOXD11-202ENST00000498438 RBMY1A1P0DJD3 496 aaKnown RBP13.33□□□□□ -0.28
HOXD11-202ENST00000498438 RBMY1CP0DJD4 496 aa13.33□□□□□ -0.28
HOXD11-202ENST00000498438 RBMY1FQ15415 496 aaKnown RBP13.33□□□□□ -0.28
HOXD11-202ENST00000498438 ZNF546Q86UE3 836 aa13.33□□□□□ -0.28
HOXD11-202ENST00000498438 MFFQ9GZY8 342 aa13.33□□□□□ -0.28
HOXD11-202ENST00000498438 ARL6Q9H0F7 186 aa13.33□□□□□ -0.28
HOXD11-202ENST00000498438 KLK5Q9Y337 293 aaPredicted RBP13.33□□□□□ -0.28
HOXD11-202ENST00000498438 FAM24AA6NFZ4 105 aa13.32□□□□□ -0.28
HOXD11-202ENST00000498438 AGPAT2O15120 278 aa13.32□□□□□ -0.28
HOXD11-202ENST00000498438 CST7O76096 145 aa13.32□□□□□ -0.28
HOXD11-202ENST00000498438 PVALBP20472 110 aaPredicted RBP13.32□□□□□ -0.28
HOXD11-202ENST00000498438 FXYD7P58549 80 aa13.32□□□□□ -0.28
HOXD11-202ENST00000498438 IL15RAQ13261 267 aa13.32□□□□□ -0.28
HOXD11-202ENST00000498438 RAB32Q13637 225 aa13.32□□□□□ -0.28
HOXD11-202ENST00000498438 OR4B1Q8NGF8 309 aa13.32□□□□□ -0.28
HOXD11-202ENST00000498438 MGST2Q99735 147 aa13.32□□□□□ -0.28
HOXD11-202ENST00000498438 RPRMQ9NS64 109 aa13.32□□□□□ -0.28
HOXD11-202ENST00000498438 A0A0J9YX75 114 aa13.31□□□□□ -0.28
HOXD11-202ENST00000498438 GOSR2O14653 212 aa13.31□□□□□ -0.28
HOXD11-202ENST00000498438 RPL7P18124 248 aaKnown RBP13.31□□□□□ -0.28
HOXD11-202ENST00000498438 SPATA31B1PQ5VZV4 182 aa13.31□□□□□ -0.28
HOXD11-202ENST00000498438 EBLN2Q6P2I7 272 aa13.31□□□□□ -0.28
HOXD11-202ENST00000498438 PATE2Q6UY27 113 aa13.31□□□□□ -0.28
HOXD11-202ENST00000498438 NRARPQ7Z6K4 114 aa13.31□□□□□ -0.28
HOXD11-202ENST00000498438 ZNF709Q8N972 641 aa13.31□□□□□ -0.28
HOXD11-202ENST00000498438 LINC00476Q8WZB0 136 aa13.31□□□□□ -0.28
HOXD11-202ENST00000498438 ARV1Q9H2C2 271 aa13.31□□□□□ -0.28
HOXD11-202ENST00000498438 GPN1Q9HCN4 374 aaPredicted RBP13.31□□□□□ -0.28
HOXD11-202ENST00000498438 LYRM2Q9NU23 88 aaPredicted RBP13.31□□□□□ -0.28
HOXD11-202ENST00000498438 TRAV8-2A0A0B4J237 113 aa13.3□□□□□ -0.28
HOXD11-202ENST00000498438 FGL1Q08830 312 aa13.3□□□□□ -0.28
HOXD11-202ENST00000498438 PXDC1Q5TGL8 231 aa13.3□□□□□ -0.28
HOXD11-202ENST00000498438 FAM78BQ5VT40 261 aa13.3□□□□□ -0.28
HOXD11-202ENST00000498438 IGFL4Q6B9Z1 124 aa13.3□□□□□ -0.28
HOXD11-202ENST00000498438 S100A7AQ86SG5 101 aa13.3□□□□□ -0.28
HOXD11-202ENST00000498438 CLUHP3Q96NS8 147 aa13.3□□□□□ -0.28
HOXD11-202ENST00000498438 ELOA3CA0A087WX78 387 aaPredicted RBP13.29□□□□□ -0.28
HOXD11-202ENST00000498438 IGSF23A1L1A6 192 aa13.29□□□□□ -0.28
HOXD11-202ENST00000498438 RNF182Q8N6D2 247 aa13.29□□□□□ -0.28
HOXD11-202ENST00000498438 SLC35B3Q9H1N7 401 aa13.29□□□□□ -0.28
HOXD11-202ENST00000498438 HRH4Q9H3N8 390 aa13.29□□□□□ -0.28
HOXD11-202ENST00000498438 UQCC1Q9NVA1 299 aa13.29□□□□□ -0.28
HOXD11-202ENST00000498438 A0A087X0K7 114 aa13.28□□□□□ -0.28
HOXD11-202ENST00000498438 INMT-MINDY4F8WBC2 141 aa13.28□□□□□ -0.28
HOXD11-202ENST00000498438 PRAF2O60831 178 aa13.28□□□□□ -0.28
HOXD11-202ENST00000498438 SIX6O95475 246 aa13.28□□□□□ -0.28
HOXD11-202ENST00000498438 CAMLGP49069 296 aa13.28□□□□□ -0.28
HOXD11-202ENST00000498438 SULT1A1P50225 295 aa13.28□□□□□ -0.28
HOXD11-202ENST00000498438 PSG9Q00887 426 aa13.28□□□□□ -0.28
HOXD11-202ENST00000498438 LINC00305Q7Z4B0 112 aa13.28□□□□□ -0.28
HOXD11-202ENST00000498438 STX12Q86Y82 276 aa13.28□□□□□ -0.28
HOXD11-202ENST00000498438 TMEM252Q8N6L7 170 aa13.28□□□□□ -0.28
HOXD11-202ENST00000498438 BATF3Q9NR55 127 aa13.28□□□□□ -0.28
HOXD11-202ENST00000498438 UBE2L5PA0A1B0GUS4 154 aa13.27□□□□□ -0.29
HOXD11-202ENST00000498438 COX7A2P2O60397 106 aa13.27□□□□□ -0.29
HOXD11-202ENST00000498438 VWC2Q2TAL6 325 aa13.27□□□□□ -0.29
HOXD11-202ENST00000498438 ZNF705AQ6ZN79 300 aaPredicted RBP13.27□□□□□ -0.29
HOXD11-202ENST00000498438 WDR83OSQ9Y284 106 aa13.27□□□□□ -0.29
HOXD11-202ENST00000498438 IGHV3OR16-12A0A075B7B8 117 aa13.26□□□□□ -0.29
HOXD11-202ENST00000498438 A8MTW9 85 aa13.26□□□□□ -0.29
HOXD11-202ENST00000498438 ZNF705FA8MVS1 300 aaPredicted RBP13.26□□□□□ -0.29
HOXD11-202ENST00000498438 MRPS12O15235 138 aaKnown RBP13.26□□□□□ -0.29
HOXD11-202ENST00000498438 LY6G6CO95867 125 aa13.26□□□□□ -0.29
HOXD11-202ENST00000498438 ZNF705DP0CH99 300 aaPredicted RBP13.26□□□□□ -0.29
HOXD11-202ENST00000498438 ZNF705BP0CI00 300 aaPredicted RBP13.26□□□□□ -0.29
HOXD11-202ENST00000498438 HLA-DMBP28068 263 aa13.26□□□□□ -0.29
HOXD11-202ENST00000498438 S100A11P31949 105 aa13.26□□□□□ -0.29
HOXD11-202ENST00000498438 DEFA1P59665 94 aa13.26□□□□□ -0.29
HOXD11-202ENST00000498438 DEFA3P59666 94 aa13.26□□□□□ -0.29
HOXD11-202ENST00000498438 HBG1P69891 147 aa13.26□□□□□ -0.29
HOXD11-202ENST00000498438 HBG2P69892 147 aa13.26□□□□□ -0.29
HOXD11-202ENST00000498438 RAB31Q13636 194 aa13.26□□□□□ -0.29
HOXD11-202ENST00000498438 MIC13Q5XKP0 118 aa13.26□□□□□ -0.29
HOXD11-202ENST00000498438 TMEM37Q8WXS4 190 aa13.26□□□□□ -0.29
HOXD11-202ENST00000498438 CELA1Q9UNI1 258 aa13.26□□□□□ -0.29
HOXD11-202ENST00000498438 RNF24Q9Y225 148 aa13.26□□□□□ -0.29
HOXD11-202ENST00000498438 BAXQ07812 192 aa13.25□□□□□ -0.29
HOXD11-202ENST00000498438 MORN5Q5VZ52 161 aa13.25□□□□□ -0.29
HOXD11-202ENST00000498438 C10orf113Q5VZT2 155 aa13.25□□□□□ -0.29
HOXD11-202ENST00000498438 AMTNQ6UX39 209 aa13.25□□□□□ -0.29
HOXD11-202ENST00000498438 ZNF738Q8NE65 137 aa13.25□□□□□ -0.29
HOXD11-202ENST00000498438 NEU1Q99519 415 aa13.25□□□□□ -0.29
HOXD11-202ENST00000498438 MARVELD1Q9BSK0 173 aa13.25□□□□□ -0.29
HOXD11-202ENST00000498438 NMES1Q9C002 83 aa13.25□□□□□ -0.29
HOXD11-202ENST00000498438 CXCL3P19876 107 aa13.24□□□□□ -0.29
HOXD11-202ENST00000498438 CNN1P51911 297 aaKnown RBP13.24□□□□□ -0.29
HOXD11-202ENST00000498438 PRR20EP86478 221 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms