RNA–Protein interactions for RNA: ENST00000497318.1

SUPT20H-223, Transcript of SPT20 homolog, SAGA complex component, human

TSL 3

Gene SUPT20H, Length 734 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SUPT20H-223	ENST00000497318	SLC35E1	Q96K37	410 aa		11.51	□□□□□ -0.57
SUPT20H-223	ENST00000497318	C20orf173	Q96LM9	149 aa		11.51	□□□□□ -0.57
SUPT20H-223	ENST00000497318	SOST	Q9BQB4	213 aa		11.51	□□□□□ -0.57
SUPT20H-223	ENST00000497318	UPK3B	Q9BT76	320 aa		11.51	□□□□□ -0.57
SUPT20H-223	ENST00000497318	RSG1	Q9BU20	258 aa		11.51	□□□□□ -0.57
SUPT20H-223	ENST00000497318	KRTAP1-5	Q9BYS1	174 aa		11.51	□□□□□ -0.57
SUPT20H-223	ENST00000497318	RBKS	Q9H477	322 aa		11.51	□□□□□ -0.57
SUPT20H-223	ENST00000497318	CCDC59	Q9P031	241 aa	Known RBP	11.51	□□□□□ -0.57
SUPT20H-223	ENST00000497318	ADAP1	O75689	374 aa		11.5	□□□□□ -0.57
SUPT20H-223	ENST00000497318	SULT1A3	P0DMM9	295 aa		11.5	□□□□□ -0.57
SUPT20H-223	ENST00000497318	SULT1A4	P0DMN0	295 aa		11.5	□□□□□ -0.57
SUPT20H-223	ENST00000497318	AZU1	P20160	251 aa		11.5	□□□□□ -0.57
SUPT20H-223	ENST00000497318	S100A7	P31151	101 aa		11.5	□□□□□ -0.57
SUPT20H-223	ENST00000497318	TNFSF8	P32971	234 aa		11.5	□□□□□ -0.57
SUPT20H-223	ENST00000497318	TAS2R60	P59551	318 aa		11.5	□□□□□ -0.57
SUPT20H-223	ENST00000497318	ZNF90	Q03938	601 aa		11.5	□□□□□ -0.57
SUPT20H-223	ENST00000497318	OR5I1	Q13606	314 aa		11.5	□□□□□ -0.57
SUPT20H-223	ENST00000497318		Q5VSD8	79 aa		11.5	□□□□□ -0.57
SUPT20H-223	ENST00000497318	CDPF1	Q6NVV7	123 aa		11.5	□□□□□ -0.57
SUPT20H-223	ENST00000497318	LGI3	Q8N145	548 aa		11.5	□□□□□ -0.57
SUPT20H-223	ENST00000497318	C16orf74	Q96GX8	76 aa		11.5	□□□□□ -0.57
SUPT20H-223	ENST00000497318	PRRT1	Q99946	306 aa		11.5	□□□□□ -0.57
SUPT20H-223	ENST00000497318	SLIRP	Q9GZT3	109 aa	Known RBP	11.5	□□□□□ -0.57
SUPT20H-223	ENST00000497318	MCUB	Q9NWR8	336 aa		11.5	□□□□□ -0.57
SUPT20H-223	ENST00000497318	PPP1R14D	Q9NXH3	145 aa		11.5	□□□□□ -0.57
SUPT20H-223	ENST00000497318		H3BMQ9	156 aa		11.49	□□□□□ -0.57
SUPT20H-223	ENST00000497318	CRX	O43186	299 aa	Predicted RBP	11.49	□□□□□ -0.57
SUPT20H-223	ENST00000497318	CFD	P00746	253 aa	Predicted RBP	11.49	□□□□□ -0.57
SUPT20H-223	ENST00000497318	M6PR	P20645	277 aa		11.49	□□□□□ -0.57
SUPT20H-223	ENST00000497318	GAMT	Q14353	236 aa		11.49	□□□□□ -0.57
SUPT20H-223	ENST00000497318	ZNF493	Q6ZR52	646 aa		11.49	□□□□□ -0.57
SUPT20H-223	ENST00000497318	RXFP4	Q8TDU9	374 aa		11.49	□□□□□ -0.57
SUPT20H-223	ENST00000497318	UHRF2	Q96PU4	802 aa		11.49	□□□□□ -0.57
SUPT20H-223	ENST00000497318	TRAV26-1	A0A087WT03	109 aa		11.48	□□□□□ -0.57
SUPT20H-223	ENST00000497318	PLAC8L1	A1L4L8	177 aa		11.48	□□□□□ -0.57
SUPT20H-223	ENST00000497318	IFNA5	P01569	189 aa		11.48	□□□□□ -0.57
SUPT20H-223	ENST00000497318	HTN1	P15515	57 aa		11.48	□□□□□ -0.57
SUPT20H-223	ENST00000497318	OR2F1	Q13607	317 aa		11.48	□□□□□ -0.57
SUPT20H-223	ENST00000497318	TMEM144	Q7Z5S9	345 aa		11.48	□□□□□ -0.57
SUPT20H-223	ENST00000497318	BAP18	Q8IXM2	172 aa		11.48	□□□□□ -0.57
SUPT20H-223	ENST00000497318	RAB2B	Q8WUD1	216 aa		11.48	□□□□□ -0.57
SUPT20H-223	ENST00000497318	GPR82	Q96P67	336 aa		11.48	□□□□□ -0.57
SUPT20H-223	ENST00000497318	ZNF586	Q9NXT0	402 aa		11.48	□□□□□ -0.57
SUPT20H-223	ENST00000497318	HSPB7	Q9UBY9	170 aa		11.48	□□□□□ -0.57
SUPT20H-223	ENST00000497318	MRPS16	Q9Y3D3	137 aa	Known RBP	11.48	□□□□□ -0.57
SUPT20H-223	ENST00000497318	IGKV1D-37	A0A075B6S9	117 aa		11.47	□□□□□ -0.57
SUPT20H-223	ENST00000497318	TMBIM6	P55061	237 aa		11.47	□□□□□ -0.57
SUPT20H-223	ENST00000497318	GGNBP1	Q5YKI7	109 aa		11.47	□□□□□ -0.57
SUPT20H-223	ENST00000497318	OR4D5	Q8NGN0	318 aa		11.47	□□□□□ -0.57
SUPT20H-223	ENST00000497318	OR1B1	Q8NGR6	318 aa		11.47	□□□□□ -0.57
SUPT20H-223	ENST00000497318	DTD1	Q8TEA8	209 aa		11.47	□□□□□ -0.57
SUPT20H-223	ENST00000497318	IL22RA2	Q969J5	263 aa		11.47	□□□□□ -0.57
SUPT20H-223	ENST00000497318	TRGV9	Q99603	122 aa		11.47	□□□□□ -0.57
SUPT20H-223	ENST00000497318	SLC25A22	Q9H936	323 aa		11.47	□□□□□ -0.57
SUPT20H-223	ENST00000497318	SLC45A2	Q9UMX9	530 aa		11.47	□□□□□ -0.57
SUPT20H-223	ENST00000497318	FLG2	Q5D862	2391 aa	Predicted RBP	11.46	□□□□□ -0.57
SUPT20H-223	ENST00000497318	TRAV12-2	A0A075B6T6	113 aa		11.46	□□□□□ -0.57
SUPT20H-223	ENST00000497318	FABP12	A6NFH5	140 aa		11.46	□□□□□ -0.57
SUPT20H-223	ENST00000497318	BOLA2-SMG1P6	H3BVE0	249 aa		11.46	□□□□□ -0.57
SUPT20H-223	ENST00000497318	XG	P55808	180 aa		11.46	□□□□□ -0.57
SUPT20H-223	ENST00000497318	ERVFC1-1	P60608	527 aa		11.46	□□□□□ -0.57
SUPT20H-223	ENST00000497318	RHOB	P62745	196 aa		11.46	□□□□□ -0.57
SUPT20H-223	ENST00000497318	SMCO1	Q147U7	214 aa		11.46	□□□□□ -0.57
SUPT20H-223	ENST00000497318	ESRG	Q1W209	222 aa		11.46	□□□□□ -0.57
SUPT20H-223	ENST00000497318	SLC25A32	Q9H2D1	315 aa		11.46	□□□□□ -0.57
SUPT20H-223	ENST00000497318	NOP10	Q9NPE3	64 aa	Known RBP	11.46	□□□□□ -0.57
SUPT20H-223	ENST00000497318	SCP2D1	Q9UJQ7	156 aa		11.46	□□□□□ -0.57
SUPT20H-223	ENST00000497318	KCNIP3	Q9Y2W7	256 aa		11.46	□□□□□ -0.57
SUPT20H-223	ENST00000497318		A0A0B4J2A0	478 aa		11.45	□□□□□ -0.58
SUPT20H-223	ENST00000497318	ZNF98	A6NK75	572 aa		11.45	□□□□□ -0.58
SUPT20H-223	ENST00000497318		H3BNG1	76 aa		11.45	□□□□□ -0.58
SUPT20H-223	ENST00000497318	IAPP	P10997	89 aa		11.45	□□□□□ -0.58
SUPT20H-223	ENST00000497318	CCR6	P51684	374 aa		11.45	□□□□□ -0.58
SUPT20H-223	ENST00000497318	LINC00315	P59091	139 aa		11.45	□□□□□ -0.58
SUPT20H-223	ENST00000497318	TMED4	Q7Z7H5	227 aa		11.45	□□□□□ -0.58
SUPT20H-223	ENST00000497318	ZNF738	Q8NE65	137 aa		11.45	□□□□□ -0.58
SUPT20H-223	ENST00000497318	MCFD2	Q8NI22	146 aa		11.45	□□□□□ -0.58
SUPT20H-223	ENST00000497318	C18orf15	Q96N68	181 aa		11.45	□□□□□ -0.58
SUPT20H-223	ENST00000497318	RSL24D1	Q9UHA3	163 aa	Known RBP	11.45	□□□□□ -0.58
SUPT20H-223	ENST00000497318	SHPK	Q9UHJ6	478 aa		11.45	□□□□□ -0.58
SUPT20H-223	ENST00000497318	MYCBP2	O75592	4640 aa		11.45	□□□□□ -0.58
SUPT20H-223	ENST00000497318		A0A0J9YY99	117 aa		11.44	□□□□□ -0.58
SUPT20H-223	ENST00000497318	FAM229A	H3BQW9	127 aa		11.44	□□□□□ -0.58
SUPT20H-223	ENST00000497318	ZNF701	M0R085	212 aa	Predicted RBP	11.44	□□□□□ -0.58
SUPT20H-223	ENST00000497318	UNQ5830/PRO19650/PRO19816	Q6UY13	95 aa		11.44	□□□□□ -0.58
SUPT20H-223	ENST00000497318	OR1S1	Q8NH92	325 aa		11.44	□□□□□ -0.58
SUPT20H-223	ENST00000497318	TRIM63	Q969Q1	353 aa		11.44	□□□□□ -0.58
SUPT20H-223	ENST00000497318	SLC25A39	Q9BZJ4	359 aa	Predicted RBP	11.44	□□□□□ -0.58
SUPT20H-223	ENST00000497318		V9GYH0	126 aa		11.44	□□□□□ -0.58
SUPT20H-223	ENST00000497318	IGKV1OR2-108	A0A075B7D4	117 aa		11.43	□□□□□ -0.58
SUPT20H-223	ENST00000497318		J3QL48	77 aa		11.43	□□□□□ -0.58
SUPT20H-223	ENST00000497318	PITX3	O75364	302 aa		11.43	□□□□□ -0.58
SUPT20H-223	ENST00000497318	RAB11A	P62491	216 aa		11.43	□□□□□ -0.58
SUPT20H-223	ENST00000497318	FGL1	Q08830	312 aa		11.43	□□□□□ -0.58
SUPT20H-223	ENST00000497318	TMEM263	Q8WUH6	116 aa	Known RBP	11.43	□□□□□ -0.58
SUPT20H-223	ENST00000497318	TMEM147	Q9BVK8	224 aa		11.43	□□□□□ -0.58
SUPT20H-223	ENST00000497318	HIST1H1A	Q02539	215 aa	Predicted RBP	11.42	□□□□□ -0.58
SUPT20H-223	ENST00000497318	PYDC2	Q56P42	97 aa		11.42	□□□□□ -0.58
SUPT20H-223	ENST00000497318	CCDC28A	Q8IWP9	274 aa		11.42	□□□□□ -0.58
SUPT20H-223	ENST00000497318	RNF182	Q8N6D2	247 aa		11.42	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 113.7 ms