RNA–Protein interactions for RNA: ENST00000496462.1

U2AF1-212, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 3,973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-212ENST00000496462 ZNF98A6NK75 572 aa6.65□□□□□ -1.35
U2AF1-212ENST00000496462 LYL1P12980 280 aa6.65□□□□□ -1.35
U2AF1-212ENST00000496462 RPL19P84098 196 aaKnown RBP6.65□□□□□ -1.35
U2AF1-212ENST00000496462 C19orf35Q6ZS72 473 aa6.65□□□□□ -1.35
U2AF1-212ENST00000496462 SLC7A5P1Q8MH63 180 aa6.65□□□□□ -1.35
U2AF1-212ENST00000496462 CHAC2Q8WUX2 184 aa6.65□□□□□ -1.35
U2AF1-212ENST00000496462 CHRDL1Q9BU40 450 aa6.65□□□□□ -1.35
U2AF1-212ENST00000496462 RNF126Q9BV68 326 aa6.65□□□□□ -1.35
U2AF1-212ENST00000496462 MAP1LC3B2A6NCE7 125 aa6.64□□□□□ -1.35
U2AF1-212ENST00000496462 SMLR1H3BR10 107 aa6.64□□□□□ -1.35
U2AF1-212ENST00000496462 AMBPP02760 352 aa6.64□□□□□ -1.35
U2AF1-212ENST00000496462 CXCL2P19875 107 aa6.64□□□□□ -1.35
U2AF1-212ENST00000496462 TMEM78Q5T7P6 136 aa6.64□□□□□ -1.35
U2AF1-212ENST00000496462 GGTLC1Q9BX51 225 aa6.64□□□□□ -1.35
U2AF1-212ENST00000496462 MAP1LC3BQ9GZQ8 125 aa6.64□□□□□ -1.35
U2AF1-212ENST00000496462 IGHV3-66A0A0C4DH42 116 aa6.64□□□□□ -1.35
U2AF1-212ENST00000496462 SLC25A5P05141 298 aaKnown RBP6.64□□□□□ -1.35
U2AF1-212ENST00000496462 NDUFA5Q16718 116 aa6.64□□□□□ -1.35
U2AF1-212ENST00000496462 SUN5Q8TC36 379 aa6.64□□□□□ -1.35
U2AF1-212ENST00000496462 CCDC140Q96MF4 163 aa6.64□□□□□ -1.35
U2AF1-212ENST00000496462 SHANK2-AS3Q9BTD1 123 aa6.64□□□□□ -1.35
U2AF1-212ENST00000496462 SLC25A39Q9BZJ4 359 aaPredicted RBP6.64□□□□□ -1.35
U2AF1-212ENST00000496462 TENM1Q9UKZ4 2725 aa6.64□□□□□ -1.35
U2AF1-212ENST00000496462 PAX9P55771 341 aa6.64□□□□□ -1.35
U2AF1-212ENST00000496462 CD81P60033 236 aa6.64□□□□□ -1.35
U2AF1-212ENST00000496462 MLANAQ16655 118 aa6.64□□□□□ -1.35
U2AF1-212ENST00000496462 TXNDC17Q9BRA2 123 aa6.64□□□□□ -1.35
U2AF1-212ENST00000496462 ZMAT4Q9H898 229 aa6.64□□□□□ -1.35
U2AF1-212ENST00000496462 SMAD5-AS1Q9Y6J3 95 aa6.64□□□□□ -1.35
U2AF1-212ENST00000496462 DSCAML1Q8TD84 2053 aa6.64□□□□□ -1.35
U2AF1-212ENST00000496462 H0YIZ8 118 aa6.63□□□□□ -1.35
U2AF1-212ENST00000496462 CNN1P51911 297 aaKnown RBP6.63□□□□□ -1.35
U2AF1-212ENST00000496462 TMED6Q8WW62 240 aa6.63□□□□□ -1.35
U2AF1-212ENST00000496462 RPUSD4Q96CM3 377 aaKnown RBP6.63□□□□□ -1.35
U2AF1-212ENST00000496462 DNHD1Q96M86 4753 aa6.63□□□□□ -1.35
U2AF1-212ENST00000496462 CUBNO60494 3623 aa6.63□□□□□ -1.35
U2AF1-212ENST00000496462 A8MWP6 167 aa6.63□□□□□ -1.35
U2AF1-212ENST00000496462 ISLRO14498 428 aa6.63□□□□□ -1.35
U2AF1-212ENST00000496462 ZNF90Q03938 601 aa6.63□□□□□ -1.35
U2AF1-212ENST00000496462 IL15RAQ13261 267 aa6.63□□□□□ -1.35
U2AF1-212ENST00000496462 FBLN7Q53RD9 439 aa6.63□□□□□ -1.35
U2AF1-212ENST00000496462 LINC00482Q8N8I6 264 aa6.63□□□□□ -1.35
U2AF1-212ENST00000496462 OR4B1Q8NGF8 309 aa6.63□□□□□ -1.35
U2AF1-212ENST00000496462 DAZAP1Q96EP5 407 aaKnown RBP6.63□□□□□ -1.35
U2AF1-212ENST00000496462 TRAV2A0A0B4J234 112 aa6.63□□□□□ -1.35
U2AF1-212ENST00000496462 SERTM2A0A1B0GWG4 89 aa6.63□□□□□ -1.35
U2AF1-212ENST00000496462 IGLL1P15814 213 aa6.63□□□□□ -1.35
U2AF1-212ENST00000496462 ZNF767PQ75MW2 155 aa6.63□□□□□ -1.35
U2AF1-212ENST00000496462 ST6GAL2Q96JF0 529 aa6.63□□□□□ -1.35
U2AF1-212ENST00000496462 SIGLEC8Q9NYZ4 499 aa6.63□□□□□ -1.35
U2AF1-212ENST00000496462 TSPAN4O14817 238 aa6.62□□□□□ -1.35
U2AF1-212ENST00000496462 IGKV1-17P01599 117 aa6.62□□□□□ -1.35
U2AF1-212ENST00000496462 NBEAP1P0C6P0 100 aa6.62□□□□□ -1.35
U2AF1-212ENST00000496462 AKR1C3P42330 323 aa6.62□□□□□ -1.35
U2AF1-212ENST00000496462 CCDC28AQ8IWP9 274 aa6.62□□□□□ -1.35
U2AF1-212ENST00000496462 MYOZ3Q8TDC0 251 aa6.62□□□□□ -1.35
U2AF1-212ENST00000496462 EIF5A2Q9GZV4 153 aaKnown RBP6.62□□□□□ -1.35
U2AF1-212ENST00000496462 MANBALQ9NQG1 85 aa6.62□□□□□ -1.35
U2AF1-212ENST00000496462 CGB1A6NKQ9 187 aa6.62□□□□□ -1.35
U2AF1-212ENST00000496462 S100A9P06702 114 aaKnown RBP6.62□□□□□ -1.35
U2AF1-212ENST00000496462 MGST2Q99735 147 aa6.62□□□□□ -1.35
U2AF1-212ENST00000496462 CHEK1O14757 476 aa6.62□□□□□ -1.35
U2AF1-212ENST00000496462 GATA2P23769 480 aaPredicted RBP6.62□□□□□ -1.35
U2AF1-212ENST00000496462 CRYBB3P26998 211 aa6.62□□□□□ -1.35
U2AF1-212ENST00000496462 PLP1P60201 277 aa6.62□□□□□ -1.35
U2AF1-212ENST00000496462 PDE6HQ13956 83 aa6.62□□□□□ -1.35
U2AF1-212ENST00000496462 C19orf54Q5BKX5 351 aa6.62□□□□□ -1.35
U2AF1-212ENST00000496462 SEPSECSQ9HD40 501 aaKnown RBP6.62□□□□□ -1.35
U2AF1-212ENST00000496462 GOLT1BQ9Y3E0 138 aa6.62□□□□□ -1.35
U2AF1-212ENST00000496462 PEA15Q15121 130 aa6.61□□□□□ -1.35
U2AF1-212ENST00000496462 PSMG4Q5JS54 123 aa6.61□□□□□ -1.35
U2AF1-212ENST00000496462 NOTCH1P46531 2555 aa6.61□□□□□ -1.35
U2AF1-212ENST00000496462 MFAP2P55001 183 aa6.61□□□□□ -1.35
U2AF1-212ENST00000496462 LYPD1Q8N2G4 141 aa6.61□□□□□ -1.35
U2AF1-212ENST00000496462 A0A1B0GV50 99 aa6.61□□□□□ -1.35
U2AF1-212ENST00000496462 LEPP41159 167 aa6.61□□□□□ -1.35
U2AF1-212ENST00000496462 LEMD1Q68G75 181 aa6.61□□□□□ -1.35
U2AF1-212ENST00000496462 TRBV12-3P01733 135 aa6.6□□□□□ -1.35
U2AF1-212ENST00000496462 CEBPGP53567 150 aa6.6□□□□□ -1.35
U2AF1-212ENST00000496462 HIST1H1AQ02539 215 aaPredicted RBP6.6□□□□□ -1.35
U2AF1-212ENST00000496462 VWC2Q2TAL6 325 aa6.6□□□□□ -1.35
U2AF1-212ENST00000496462 KLK9Q2XQG4 91 aa6.6□□□□□ -1.35
U2AF1-212ENST00000496462 SAT2Q96F10 170 aaPredicted RBP6.6□□□□□ -1.35
U2AF1-212ENST00000496462 TCEAL7Q9BRU2 100 aa6.6□□□□□ -1.35
U2AF1-212ENST00000496462 MLXQ9UH92 298 aa6.6□□□□□ -1.35
U2AF1-212ENST00000496462 KLK9Q9UKQ9 250 aa6.6□□□□□ -1.35
U2AF1-212ENST00000496462 FBN3Q75N90 2809 aa6.6□□□□□ -1.35
U2AF1-212ENST00000496462 WI2-2373I1.2A0A1W2PRP0 233 aa6.6□□□□□ -1.35
U2AF1-212ENST00000496462 H3BRN7 92 aa6.6□□□□□ -1.35
U2AF1-212ENST00000496462 ZNF688P0C7X2 276 aa6.6□□□□□ -1.35
U2AF1-212ENST00000496462 ADMP35318 185 aa6.6□□□□□ -1.35
U2AF1-212ENST00000496462 DEFB131AP59861 70 aa6.6□□□□□ -1.35
U2AF1-212ENST00000496462 RANP62826 216 aaKnown RBP6.6□□□□□ -1.35
U2AF1-212ENST00000496462 DEFB114Q30KQ6 69 aa6.6□□□□□ -1.35
U2AF1-212ENST00000496462 C16orf54Q6UWD8 224 aa6.6□□□□□ -1.35
U2AF1-212ENST00000496462 MRAPQ8TCY5 172 aa6.6□□□□□ -1.35
U2AF1-212ENST00000496462 RAB24Q969Q5 203 aa6.6□□□□□ -1.35
U2AF1-212ENST00000496462 A0A1B0GW64 132 aa6.6□□□□□ -1.35
U2AF1-212ENST00000496462 XKRY2A2RUG3 117 aa6.6□□□□□ -1.35
U2AF1-212ENST00000496462 SSBP2P81877 361 aaPredicted RBP6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms