RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-209ENST00000496445 RSG1Q9BU20 258 aa10.23□□□□□ -0.77
VTI1A-209ENST00000496445 TMEM147Q9BVK8 224 aa10.23□□□□□ -0.77
VTI1A-209ENST00000496445 DOK5Q9P104 306 aa10.23□□□□□ -0.77
VTI1A-209ENST00000496445 RCL1Q9Y2P8 373 aaKnown RBP10.23□□□□□ -0.77
VTI1A-209ENST00000496445 TRAV8-2A0A0B4J237 113 aa10.22□□□□□ -0.77
VTI1A-209ENST00000496445 A8MTW9 85 aa10.22□□□□□ -0.77
VTI1A-209ENST00000496445 IFNA21P01568 189 aa10.22□□□□□ -0.77
VTI1A-209ENST00000496445 AMBPP02760 352 aa10.22□□□□□ -0.77
VTI1A-209ENST00000496445 RRAS2P62070 204 aaPredicted RBP10.22□□□□□ -0.77
VTI1A-209ENST00000496445 PSG9Q00887 426 aa10.22□□□□□ -0.77
VTI1A-209ENST00000496445 IAH1Q2TAA2 248 aaPredicted RBP10.22□□□□□ -0.77
VTI1A-209ENST00000496445 EBLN2Q6P2I7 272 aa10.22□□□□□ -0.77
VTI1A-209ENST00000496445 SLC25A39Q9BZJ4 359 aaPredicted RBP10.22□□□□□ -0.77
VTI1A-209ENST00000496445 RPRMQ9NS64 109 aa10.22□□□□□ -0.77
VTI1A-209ENST00000496445 DYNC1H1Q14204 4646 aaKnown RBP10.22□□□□□ -0.77
VTI1A-209ENST00000496445 DNAH11Q96DT5 4516 aa10.21□□□□□ -0.77
VTI1A-209ENST00000496445 IGHV3OR16-12A0A075B7B8 117 aa10.21□□□□□ -0.77
VTI1A-209ENST00000496445 DEFB131BA0A096LNP1 70 aa10.21□□□□□ -0.77
VTI1A-209ENST00000496445 CENPXA8MT69 81 aa10.21□□□□□ -0.77
VTI1A-209ENST00000496445 PLA2G10O15496 165 aa10.21□□□□□ -0.77
VTI1A-209ENST00000496445 SCGB1D2O95969 90 aa10.21□□□□□ -0.77
VTI1A-209ENST00000496445 METTL15P1P0C7V9 234 aa10.21□□□□□ -0.77
VTI1A-209ENST00000496445 DLK1P80370 383 aa10.21□□□□□ -0.77
VTI1A-209ENST00000496445 IGFL4Q6B9Z1 124 aa10.21□□□□□ -0.77
VTI1A-209ENST00000496445 AMTNQ6UX39 209 aa10.21□□□□□ -0.77
VTI1A-209ENST00000496445 C1orf158Q8N1D5 194 aa10.21□□□□□ -0.77
VTI1A-209ENST00000496445 ZBTB8BQ8NAP8 495 aaPredicted RBP10.21□□□□□ -0.77
VTI1A-209ENST00000496445 MITD1Q8WV92 249 aa10.21□□□□□ -0.77
VTI1A-209ENST00000496445 GPR82Q96P67 336 aa10.21□□□□□ -0.77
VTI1A-209ENST00000496445 SHANK2-AS3Q9BTD1 123 aa10.21□□□□□ -0.77
VTI1A-209ENST00000496445 RNF126Q9BV68 326 aa10.21□□□□□ -0.77
VTI1A-209ENST00000496445 C20orf85Q9H1P6 137 aa10.21□□□□□ -0.77
VTI1A-209ENST00000496445 SMIM9A6NGZ8 99 aa10.2□□□□□ -0.78
VTI1A-209ENST00000496445 IL5P05113 134 aa10.2□□□□□ -0.78
VTI1A-209ENST00000496445 LINC00869P0C866 280 aa10.2□□□□□ -0.78
VTI1A-209ENST00000496445 EMP1P54849 157 aa10.2□□□□□ -0.78
VTI1A-209ENST00000496445 PLP1P60201 277 aa10.2□□□□□ -0.78
VTI1A-209ENST00000496445 ARL16Q0P5N6 197 aa10.2□□□□□ -0.78
VTI1A-209ENST00000496445 RNF182Q8N6D2 247 aa10.2□□□□□ -0.78
VTI1A-209ENST00000496445 UHRF2Q96PU4 802 aa10.2□□□□□ -0.78
VTI1A-209ENST00000496445 HIGD1AQ9Y241 93 aa10.2□□□□□ -0.78
VTI1A-209ENST00000496445 RFNGQ9Y644 331 aa10.2□□□□□ -0.78
VTI1A-209ENST00000496445 TMEM189A5PLL7 270 aa10.19□□□□□ -0.78
VTI1A-209ENST00000496445 FNDC10F2Z333 226 aa10.19□□□□□ -0.78
VTI1A-209ENST00000496445 J3QL48 77 aa10.19□□□□□ -0.78
VTI1A-209ENST00000496445 K7EPK0 472 aa10.19□□□□□ -0.78
VTI1A-209ENST00000496445 CCSO14618 274 aa10.19□□□□□ -0.78
VTI1A-209ENST00000496445 LYRM1O43325 122 aa10.19□□□□□ -0.78
VTI1A-209ENST00000496445 TSC22D2O75157 780 aa10.19□□□□□ -0.78
VTI1A-209ENST00000496445 SLC38A11Q08AI6 406 aa10.19□□□□□ -0.78
VTI1A-209ENST00000496445 LINC01559Q495D7 138 aa10.19□□□□□ -0.78
VTI1A-209ENST00000496445 DKK2Q9UBU2 259 aa10.19□□□□□ -0.78
VTI1A-209ENST00000496445 C7orf66A4D0T2 115 aa10.18□□□□□ -0.78
VTI1A-209ENST00000496445 HYPMO75409 117 aa10.18□□□□□ -0.78
VTI1A-209ENST00000496445 MBPP02686 304 aaPredicted RBP10.18□□□□□ -0.78
VTI1A-209ENST00000496445 SPART-AS1P0CW21 52 aa10.18□□□□□ -0.78
VTI1A-209ENST00000496445 CNN1P51911 297 aaKnown RBP10.18□□□□□ -0.78
VTI1A-209ENST00000496445 TAS2R30P59541 319 aa10.18□□□□□ -0.78
VTI1A-209ENST00000496445 RAP2BP61225 183 aa10.18□□□□□ -0.78
VTI1A-209ENST00000496445 SELENOTP62341 195 aa10.18□□□□□ -0.78
VTI1A-209ENST00000496445 FAM222AQ5U5X8 452 aa10.18□□□□□ -0.78
VTI1A-209ENST00000496445 PATE2Q6UY27 113 aa10.18□□□□□ -0.78
VTI1A-209ENST00000496445 NPVFQ9HCQ7 196 aa10.18□□□□□ -0.78
VTI1A-209ENST00000496445 GSKIPQ9P0R6 139 aa10.18□□□□□ -0.78
VTI1A-209ENST00000496445 GOLT1BQ9Y3E0 138 aa10.18□□□□□ -0.78
VTI1A-209ENST00000496445 KIAA1109Q2LD37 5005 aa10.18□□□□□ -0.78
VTI1A-209ENST00000496445 A0A087X0K7 114 aa10.17□□□□□ -0.78
VTI1A-209ENST00000496445 MRPS12O15235 138 aaKnown RBP10.17□□□□□ -0.78
VTI1A-209ENST00000496445 CRXO43186 299 aaPredicted RBP10.17□□□□□ -0.78
VTI1A-209ENST00000496445 OR5G3P0C626 314 aa10.17□□□□□ -0.78
VTI1A-209ENST00000496445 RPL7P18124 248 aaKnown RBP10.17□□□□□ -0.78
VTI1A-209ENST00000496445 S100A7P31151 101 aa10.17□□□□□ -0.78
VTI1A-209ENST00000496445 FGL1Q08830 312 aa10.17□□□□□ -0.78
VTI1A-209ENST00000496445 CNPY1Q3B7I2 92 aa10.17□□□□□ -0.78
VTI1A-209ENST00000496445 TEPPQ6URK8 271 aa10.17□□□□□ -0.78
VTI1A-209ENST00000496445 OR11H7Q8NGC8 314 aa10.17□□□□□ -0.78
VTI1A-209ENST00000496445 OR10P1Q8NGE3 313 aa10.17□□□□□ -0.78
VTI1A-209ENST00000496445 ARL6Q9H0F7 186 aa10.17□□□□□ -0.78
VTI1A-209ENST00000496445 MGAT4CQ9UBM8 478 aa10.17□□□□□ -0.78
VTI1A-209ENST00000496445 TRAV6A0A075B6T7 132 aa10.16□□□□□ -0.78
VTI1A-209ENST00000496445 LOC102723971A0A1B0GUV8 181 aa10.16□□□□□ -0.78
VTI1A-209ENST00000496445 M0R2Z0 102 aa10.16□□□□□ -0.78
VTI1A-209ENST00000496445 HBE1P02100 147 aa10.16□□□□□ -0.78
VTI1A-209ENST00000496445 TCRBP04435 133 aa10.16□□□□□ -0.78
VTI1A-209ENST00000496445 SPINK13Q1W4C9 94 aa10.16□□□□□ -0.78
VTI1A-209ENST00000496445 IGF2BP2-AS1Q96M15 143 aa10.16□□□□□ -0.78
VTI1A-209ENST00000496445 SEC22CQ9BRL7 303 aa10.16□□□□□ -0.78
VTI1A-209ENST00000496445 NDUFAF3Q9BU61 184 aa10.16□□□□□ -0.78
VTI1A-209ENST00000496445 ARV1Q9H2C2 271 aa10.16□□□□□ -0.78
VTI1A-209ENST00000496445 C11orf1Q9H5F2 150 aa10.16□□□□□ -0.78
VTI1A-209ENST00000496445 NUDT15Q9NV35 164 aa10.16□□□□□ -0.78
VTI1A-209ENST00000496445 YTHDF2Q9Y5A9 579 aaKnown RBP10.16□□□□□ -0.78
VTI1A-209ENST00000496445 AGPAT2O15120 278 aa10.15□□□□□ -0.78
VTI1A-209ENST00000496445 DUSP14O95147 198 aaKnown RBP10.15□□□□□ -0.78
VTI1A-209ENST00000496445 INSP01308 110 aa10.15□□□□□ -0.78
VTI1A-209ENST00000496445 PRM2P04554 102 aa10.15□□□□□ -0.78
VTI1A-209ENST00000496445 PRB4P10163 310 aaPredicted RBP10.15□□□□□ -0.78
VTI1A-209ENST00000496445 CXCL3P19876 107 aa10.15□□□□□ -0.78
VTI1A-209ENST00000496445 BAP18Q8IXM2 172 aa10.15□□□□□ -0.78
VTI1A-209ENST00000496445 ZNF738Q8NE65 137 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms