RNA–Protein interactions for RNA: ENST00000496342.1

RHBDD3-207, Transcript of rhomboid domain containing 3, humanhuman

TSL 2

Gene RHBDD3, Length 849 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-207ENST00000496342 FGL1Q08830 312 aa12.8□□□□□ -0.36
RHBDD3-207ENST00000496342 PMS2P11Q13670 270 aa12.8□□□□□ -0.36
RHBDD3-207ENST00000496342 MORN5Q5VZ52 161 aa12.8□□□□□ -0.36
RHBDD3-207ENST00000496342 ZNF546Q86UE3 836 aa12.8□□□□□ -0.36
RHBDD3-207ENST00000496342 IL17DQ8TAD2 202 aa12.8□□□□□ -0.36
RHBDD3-207ENST00000496342 NMES1Q9C002 83 aa12.8□□□□□ -0.36
RHBDD3-207ENST00000496342 ARV1Q9H2C2 271 aa12.8□□□□□ -0.36
RHBDD3-207ENST00000496342 UQCC1Q9NVA1 299 aa12.8□□□□□ -0.36
RHBDD3-207ENST00000496342 WDR83OSQ9Y284 106 aa12.8□□□□□ -0.36
RHBDD3-207ENST00000496342 HLA-DRB4P13762 266 aa12.79□□□□□ -0.36
RHBDD3-207ENST00000496342 CAMLGP49069 296 aa12.79□□□□□ -0.36
RHBDD3-207ENST00000496342 NHLH2Q02577 135 aa12.79□□□□□ -0.36
RHBDD3-207ENST00000496342 BAXQ07812 192 aa12.79□□□□□ -0.36
RHBDD3-207ENST00000496342 VWC2Q2TAL6 325 aa12.79□□□□□ -0.36
RHBDD3-207ENST00000496342 STX12Q86Y82 276 aa12.79□□□□□ -0.36
RHBDD3-207ENST00000496342 RNF182Q8N6D2 247 aa12.79□□□□□ -0.36
RHBDD3-207ENST00000496342 GATAD1Q8WUU5 269 aa12.79□□□□□ -0.36
RHBDD3-207ENST00000496342 C16orf92Q96LL3 132 aa12.79□□□□□ -0.36
RHBDD3-207ENST00000496342 SEPSECSQ9HD40 501 aaKnown RBP12.79□□□□□ -0.36
RHBDD3-207ENST00000496342 ALG5Q9Y673 324 aa12.79□□□□□ -0.36
RHBDD3-207ENST00000496342 HLA-DRB4X5D2U9 266 aa12.79□□□□□ -0.36
RHBDD3-207ENST00000496342 TRAV8-2A0A0B4J237 113 aa12.78□□□□□ -0.36
RHBDD3-207ENST00000496342 SPP1P10451 314 aa12.78□□□□□ -0.36
RHBDD3-207ENST00000496342 HLA-DMBP28068 263 aa12.78□□□□□ -0.36
RHBDD3-207ENST00000496342 ID1P41134 155 aa12.78□□□□□ -0.36
RHBDD3-207ENST00000496342 MORN3Q6PF18 240 aaPredicted RBP12.78□□□□□ -0.36
RHBDD3-207ENST00000496342 TMEM37Q8WXS4 190 aa12.78□□□□□ -0.36
RHBDD3-207ENST00000496342 SAV1Q9H4B6 383 aaPredicted RBP12.78□□□□□ -0.36
RHBDD3-207ENST00000496342 ISLRO14498 428 aa12.77□□□□□ -0.37
RHBDD3-207ENST00000496342 COX7A2P2O60397 106 aa12.77□□□□□ -0.37
RHBDD3-207ENST00000496342 ATF4P18848 351 aaPredicted RBP12.77□□□□□ -0.37
RHBDD3-207ENST00000496342 FGF7P21781 194 aa12.77□□□□□ -0.37
RHBDD3-207ENST00000496342 LINC00305Q7Z4B0 112 aa12.77□□□□□ -0.37
RHBDD3-207ENST00000496342 PPP1R1CQ8WVI7 109 aa12.77□□□□□ -0.37
RHBDD3-207ENST00000496342 XCL2Q9UBD3 114 aa12.77□□□□□ -0.37
RHBDD3-207ENST00000496342 H3BTX0 84 aa12.76□□□□□ -0.37
RHBDD3-207ENST00000496342 MRPS12O15235 138 aaKnown RBP12.76□□□□□ -0.37
RHBDD3-207ENST00000496342 S100A11P31949 105 aa12.76□□□□□ -0.37
RHBDD3-207ENST00000496342 HBG1P69891 147 aa12.76□□□□□ -0.37
RHBDD3-207ENST00000496342 HBG2P69892 147 aa12.76□□□□□ -0.37
RHBDD3-207ENST00000496342 PRR20EP86478 221 aa12.76□□□□□ -0.37
RHBDD3-207ENST00000496342 PRR20CP86479 221 aa12.76□□□□□ -0.37
RHBDD3-207ENST00000496342 PRR20DP86480 221 aa12.76□□□□□ -0.37
RHBDD3-207ENST00000496342 PRR20BP86481 221 aa12.76□□□□□ -0.37
RHBDD3-207ENST00000496342 PRR20AP86496 221 aa12.76□□□□□ -0.37
RHBDD3-207ENST00000496342 OPCMLQ14982 345 aa12.76□□□□□ -0.37
RHBDD3-207ENST00000496342 FOXI2Q6ZQN5 318 aa12.76□□□□□ -0.37
RHBDD3-207ENST00000496342 CSNK1G2-AS1Q8NCQ2 148 aa12.76□□□□□ -0.37
RHBDD3-207ENST00000496342 OR4B1Q8NGF8 309 aa12.76□□□□□ -0.37
RHBDD3-207ENST00000496342 THAP6Q8TBB0 222 aa12.76□□□□□ -0.37
RHBDD3-207ENST00000496342 GPR82Q96P67 336 aa12.76□□□□□ -0.37
RHBDD3-207ENST00000496342 X6R8D5 127 aa12.76□□□□□ -0.37
RHBDD3-207ENST00000496342 TRAV5A0A0B4J249 113 aa12.75□□□□□ -0.37
RHBDD3-207ENST00000496342 E5RGE8 158 aa12.75□□□□□ -0.37
RHBDD3-207ENST00000496342 ZNF705DP0CH99 300 aaPredicted RBP12.75□□□□□ -0.37
RHBDD3-207ENST00000496342 ZNF705BP0CI00 300 aaPredicted RBP12.75□□□□□ -0.37
RHBDD3-207ENST00000496342 RPL7P18124 248 aaKnown RBP12.75□□□□□ -0.37
RHBDD3-207ENST00000496342 MEOX2P50222 304 aa12.75□□□□□ -0.37
RHBDD3-207ENST00000496342 CLINT1Q14677 625 aa12.75□□□□□ -0.37
RHBDD3-207ENST00000496342 DYNC2H1Q8NCM8 4307 aaKnown RBP12.75□□□□□ -0.37
RHBDD3-207ENST00000496342 OR5C1Q8NGR4 320 aa12.75□□□□□ -0.37
RHBDD3-207ENST00000496342 RNF126Q9BV68 326 aa12.75□□□□□ -0.37
RHBDD3-207ENST00000496342 SLC35B3Q9H1N7 401 aa12.75□□□□□ -0.37
RHBDD3-207ENST00000496342 TENM2Q9NT68 2774 aa12.75□□□□□ -0.37
RHBDD3-207ENST00000496342 A0A0J9YX75 114 aa12.74□□□□□ -0.37
RHBDD3-207ENST00000496342 CXorf65A6NEN9 183 aa12.74□□□□□ -0.37
RHBDD3-207ENST00000496342 MPC2O95563 127 aa12.74□□□□□ -0.37
RHBDD3-207ENST00000496342 PTTG1O95997 202 aa12.74□□□□□ -0.37
RHBDD3-207ENST00000496342 RLN2P04090 185 aa12.74□□□□□ -0.37
RHBDD3-207ENST00000496342 CXCL3P19876 107 aa12.74□□□□□ -0.37
RHBDD3-207ENST00000496342 B2MP61769 119 aa12.74□□□□□ -0.37
RHBDD3-207ENST00000496342 FAM78BQ5VT40 261 aa12.74□□□□□ -0.37
RHBDD3-207ENST00000496342 C10orf113Q5VZT2 155 aa12.74□□□□□ -0.37
RHBDD3-207ENST00000496342 ZNF709Q8N972 641 aa12.74□□□□□ -0.37
RHBDD3-207ENST00000496342 Q8NAQ8 132 aa12.74□□□□□ -0.37
RHBDD3-207ENST00000496342 PXMP4Q9Y6I8 212 aa12.74□□□□□ -0.37
RHBDD3-207ENST00000496342 A0A087X0K7 114 aa12.73□□□□□ -0.37
RHBDD3-207ENST00000496342 IGHV4-28A0A0C4DH34 117 aa12.73□□□□□ -0.37
RHBDD3-207ENST00000496342 RBMY1A1P0DJD3 496 aaKnown RBP12.73□□□□□ -0.37
RHBDD3-207ENST00000496342 RBMY1CP0DJD4 496 aa12.73□□□□□ -0.37
RHBDD3-207ENST00000496342 S100A7P31151 101 aa12.73□□□□□ -0.37
RHBDD3-207ENST00000496342 NANOS2P60321 138 aaKnown RBP12.73□□□□□ -0.37
RHBDD3-207ENST00000496342 CYCSP99999 105 aaKnown RBP12.73□□□□□ -0.37
RHBDD3-207ENST00000496342 RBMY1FQ15415 496 aaKnown RBP12.73□□□□□ -0.37
RHBDD3-207ENST00000496342 GCSAMLQ5JQS6 135 aa12.73□□□□□ -0.37
RHBDD3-207ENST00000496342 PXDC1Q5TGL8 231 aa12.73□□□□□ -0.37
RHBDD3-207ENST00000496342 RPRMQ9NS64 109 aa12.73□□□□□ -0.37
RHBDD3-207ENST00000496342 SLC39A9Q9NUM3 307 aa12.73□□□□□ -0.37
RHBDD3-207ENST00000496342 MBD2Q9UBB5 411 aa12.73□□□□□ -0.37
RHBDD3-207ENST00000496342 ZNF705EA8MWA4 302 aaPredicted RBP12.72□□□□□ -0.37
RHBDD3-207ENST00000496342 SLC17A3O00476 420 aa12.72□□□□□ -0.37
RHBDD3-207ENST00000496342 RAB31Q13636 194 aa12.72□□□□□ -0.37
RHBDD3-207ENST00000496342 ATP6V1FQ16864 119 aa12.72□□□□□ -0.37
RHBDD3-207ENST00000496342 EBLN2Q6P2I7 272 aa12.72□□□□□ -0.37
RHBDD3-207ENST00000496342 ZNF738Q8NE65 137 aa12.72□□□□□ -0.37
RHBDD3-207ENST00000496342 NPCDR1Q9BY65 106 aa12.72□□□□□ -0.37
RHBDD3-207ENST00000496342 SMIM3Q9BZL3 60 aa12.72□□□□□ -0.37
RHBDD3-207ENST00000496342 SLC25A31Q9H0C2 315 aa12.72□□□□□ -0.37
RHBDD3-207ENST00000496342 C11orf68Q9H3H3 251 aaKnown RBP12.72□□□□□ -0.37
RHBDD3-207ENST00000496342 RPL29P47914 159 aaKnown RBP12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms