RNA–Protein interactions for RNA: ENST00000496071.5

COMMD3-214, Transcript of COMM domain containing 3, humanhuman

TSL 5

Gene COMMD3, Length 1,150 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-214ENST00000496071 CSMD3Q7Z407 3707 aa12.4□□□□□ -0.42
COMMD3-214ENST00000496071 ZNF705EA8MWA4 302 aaPredicted RBP12.4□□□□□ -0.42
COMMD3-214ENST00000496071 AGPAT2O15120 278 aa12.4□□□□□ -0.42
COMMD3-214ENST00000496071 DEFA1P59665 94 aa12.4□□□□□ -0.42
COMMD3-214ENST00000496071 DEFA3P59666 94 aa12.4□□□□□ -0.42
COMMD3-214ENST00000496071 S100A10P60903 97 aa12.4□□□□□ -0.42
COMMD3-214ENST00000496071 SLC38A11Q08AI6 406 aa12.4□□□□□ -0.42
COMMD3-214ENST00000496071 EBLN2Q6P2I7 272 aa12.4□□□□□ -0.42
COMMD3-214ENST00000496071 CEMP1Q6PRD7 247 aaPredicted RBP12.4□□□□□ -0.42
COMMD3-214ENST00000496071 CSNK1G2-AS1Q8NCQ2 148 aa12.4□□□□□ -0.42
COMMD3-214ENST00000496071 C11orf45Q8TAV5 145 aa12.4□□□□□ -0.42
COMMD3-214ENST00000496071 SCRT1Q9BWW7 348 aa12.4□□□□□ -0.42
COMMD3-214ENST00000496071 ARL6Q9H0F7 186 aa12.4□□□□□ -0.42
COMMD3-214ENST00000496071 KLK5Q9Y337 293 aaPredicted RBP12.4□□□□□ -0.42
COMMD3-214ENST00000496071 FAM24AA6NFZ4 105 aa12.39□□□□□ -0.43
COMMD3-214ENST00000496071 INMT-MINDY4F8WBC2 141 aa12.39□□□□□ -0.43
COMMD3-214ENST00000496071 RAB31Q13636 194 aa12.39□□□□□ -0.43
COMMD3-214ENST00000496071 RAB32Q13637 225 aa12.39□□□□□ -0.43
COMMD3-214ENST00000496071 NRARPQ7Z6K4 114 aa12.39□□□□□ -0.43
COMMD3-214ENST00000496071 LYRM2Q9NU23 88 aaPredicted RBP12.39□□□□□ -0.43
COMMD3-214ENST00000496071 CLEC5AQ9NY25 188 aa12.39□□□□□ -0.43
COMMD3-214ENST00000496071 CST7O76096 145 aa12.38□□□□□ -0.43
COMMD3-214ENST00000496071 S100A11P31949 105 aa12.38□□□□□ -0.43
COMMD3-214ENST00000496071 SULT1A1P50225 295 aa12.38□□□□□ -0.43
COMMD3-214ENST00000496071 GDF5OSQ5U4N7 250 aa12.38□□□□□ -0.43
COMMD3-214ENST00000496071 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.38□□□□□ -0.43
COMMD3-214ENST00000496071 Q8NAQ8 132 aa12.38□□□□□ -0.43
COMMD3-214ENST00000496071 ARV1Q9H2C2 271 aa12.38□□□□□ -0.43
COMMD3-214ENST00000496071 XCL2Q9UBD3 114 aa12.38□□□□□ -0.43
COMMD3-214ENST00000496071 RLN2P04090 185 aa12.37□□□□□ -0.43
COMMD3-214ENST00000496071 HBG1P69891 147 aa12.37□□□□□ -0.43
COMMD3-214ENST00000496071 HBG2P69892 147 aa12.37□□□□□ -0.43
COMMD3-214ENST00000496071 CYCSP99999 105 aaKnown RBP12.37□□□□□ -0.43
COMMD3-214ENST00000496071 PATE2Q6UY27 113 aa12.37□□□□□ -0.43
COMMD3-214ENST00000496071 STX12Q86Y82 276 aa12.37□□□□□ -0.43
COMMD3-214ENST00000496071 TMEM252Q8N6L7 170 aa12.37□□□□□ -0.43
COMMD3-214ENST00000496071 OR4B1Q8NGF8 309 aa12.37□□□□□ -0.43
COMMD3-214ENST00000496071 PHLDA1Q8WV24 401 aaPredicted RBP12.37□□□□□ -0.43
COMMD3-214ENST00000496071 C17orf77Q96MU5 243 aa12.37□□□□□ -0.43
COMMD3-214ENST00000496071 UHRF2Q96PU4 802 aa12.37□□□□□ -0.43
COMMD3-214ENST00000496071 MGST2Q99735 147 aa12.37□□□□□ -0.43
COMMD3-214ENST00000496071 MARVELD1Q9BSK0 173 aa12.37□□□□□ -0.43
COMMD3-214ENST00000496071 UQCC1Q9NVA1 299 aa12.37□□□□□ -0.43
COMMD3-214ENST00000496071 X6R8D5 127 aa12.37□□□□□ -0.43
COMMD3-214ENST00000496071 STARD9Q9P2P6 4700 aa12.37□□□□□ -0.43
COMMD3-214ENST00000496071 ELOA3CA0A087WX78 387 aaPredicted RBP12.36□□□□□ -0.43
COMMD3-214ENST00000496071 IGHV4-28A0A0C4DH34 117 aa12.36□□□□□ -0.43
COMMD3-214ENST00000496071 A0A0J9YX75 114 aa12.36□□□□□ -0.43
COMMD3-214ENST00000496071 DEFB4AO15263 64 aa12.36□□□□□ -0.43
COMMD3-214ENST00000496071 IGKV3-20P01619 116 aa12.36□□□□□ -0.43
COMMD3-214ENST00000496071 CAMLGP49069 296 aa12.36□□□□□ -0.43
COMMD3-214ENST00000496071 DEFB1P60022 68 aa12.36□□□□□ -0.43
COMMD3-214ENST00000496071 FGL1Q08830 312 aa12.36□□□□□ -0.43
COMMD3-214ENST00000496071 ATP6V1FQ16864 119 aa12.36□□□□□ -0.43
COMMD3-214ENST00000496071 VWC2Q2TAL6 325 aa12.36□□□□□ -0.43
COMMD3-214ENST00000496071 Q6ZRG5 221 aa12.36□□□□□ -0.43
COMMD3-214ENST00000496071 NMES1Q9C002 83 aa12.36□□□□□ -0.43
COMMD3-214ENST00000496071 HRH4Q9H3N8 390 aa12.36□□□□□ -0.43
COMMD3-214ENST00000496071 A0A087X0K7 114 aa12.35□□□□□ -0.43
COMMD3-214ENST00000496071 RBMY1A1P0DJD3 496 aaKnown RBP12.35□□□□□ -0.43
COMMD3-214ENST00000496071 RBMY1CP0DJD4 496 aa12.35□□□□□ -0.43
COMMD3-214ENST00000496071 NANOS2P60321 138 aaKnown RBP12.35□□□□□ -0.43
COMMD3-214ENST00000496071 PSG9Q00887 426 aa12.35□□□□□ -0.43
COMMD3-214ENST00000496071 RBMY1FQ15415 496 aaKnown RBP12.35□□□□□ -0.43
COMMD3-214ENST00000496071 FAM78BQ5VT40 261 aa12.35□□□□□ -0.43
COMMD3-214ENST00000496071 LINC00305Q7Z4B0 112 aa12.35□□□□□ -0.43
COMMD3-214ENST00000496071 C20orf173Q96LM9 149 aa12.35□□□□□ -0.43
COMMD3-214ENST00000496071 WDR83OSQ9Y284 106 aa12.35□□□□□ -0.43
COMMD3-214ENST00000496071 RYR3Q15413 4870 aa12.35□□□□□ -0.43
COMMD3-214ENST00000496071 IGSF23A1L1A6 192 aa12.34□□□□□ -0.43
COMMD3-214ENST00000496071 F6UB75 175 aa12.34□□□□□ -0.43
COMMD3-214ENST00000496071 COX7A2P2O60397 106 aa12.34□□□□□ -0.43
COMMD3-214ENST00000496071 DUSP14O95147 198 aaKnown RBP12.34□□□□□ -0.43
COMMD3-214ENST00000496071 LRRC20Q8TCA0 184 aa12.34□□□□□ -0.43
COMMD3-214ENST00000496071 NEU1Q99519 415 aa12.34□□□□□ -0.43
COMMD3-214ENST00000496071 TRAV8-2A0A0B4J237 113 aa12.33□□□□□ -0.44
COMMD3-214ENST00000496071 SMIM9A6NGZ8 99 aa12.33□□□□□ -0.44
COMMD3-214ENST00000496071 E5RGE8 158 aa12.33□□□□□ -0.44
COMMD3-214ENST00000496071 SIX6O95475 246 aa12.33□□□□□ -0.44
COMMD3-214ENST00000496071 FXYD7P58549 80 aa12.33□□□□□ -0.44
COMMD3-214ENST00000496071 C10orf113Q5VZT2 155 aa12.33□□□□□ -0.44
COMMD3-214ENST00000496071 ZNF705AQ6ZN79 300 aaPredicted RBP12.33□□□□□ -0.44
COMMD3-214ENST00000496071 BPIFA4PQ86YQ2 179 aa12.33□□□□□ -0.44
COMMD3-214ENST00000496071 OR1L4Q8NGR5 311 aa12.33□□□□□ -0.44
COMMD3-214ENST00000496071 CHAC2Q8WUX2 184 aa12.33□□□□□ -0.44
COMMD3-214ENST00000496071 TMEM37Q8WXS4 190 aa12.33□□□□□ -0.44
COMMD3-214ENST00000496071 SLC25A31Q9H0C2 315 aa12.33□□□□□ -0.44
COMMD3-214ENST00000496071 DNAJC4Q9NNZ3 241 aa12.33□□□□□ -0.44
COMMD3-214ENST00000496071 DYNC2H1Q8NCM8 4307 aaKnown RBP12.32□□□□□ -0.44
COMMD3-214ENST00000496071 A8MTW9 85 aa12.32□□□□□ -0.44
COMMD3-214ENST00000496071 C11orf94C9JXX5 98 aa12.32□□□□□ -0.44
COMMD3-214ENST00000496071 MRPS12O15235 138 aaKnown RBP12.32□□□□□ -0.44
COMMD3-214ENST00000496071 MPDU1O75352 247 aa12.32□□□□□ -0.44
COMMD3-214ENST00000496071 CXCL2P19875 107 aa12.32□□□□□ -0.44
COMMD3-214ENST00000496071 RPL29P47914 159 aaKnown RBP12.32□□□□□ -0.44
COMMD3-214ENST00000496071 PRR20EP86478 221 aa12.32□□□□□ -0.44
COMMD3-214ENST00000496071 PRR20CP86479 221 aa12.32□□□□□ -0.44
COMMD3-214ENST00000496071 PRR20DP86480 221 aa12.32□□□□□ -0.44
COMMD3-214ENST00000496071 PRR20BP86481 221 aa12.32□□□□□ -0.44
COMMD3-214ENST00000496071 PRR20AP86496 221 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms