RNA–Protein interactions for RNA: ENST00000495010.5

VARS-228, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 1,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-228ENST00000495010 PRRT1Q99946 306 aa9.95□□□□□ -0.82
VARS-228ENST00000495010 SHPKQ9UHJ6 478 aa9.95□□□□□ -0.82
VARS-228ENST00000495010 SLC45A2Q9UMX9 530 aa9.95□□□□□ -0.82
VARS-228ENST00000495010 TIMM8BQ9Y5J9 83 aaPredicted RBP9.95□□□□□ -0.82
VARS-228ENST00000495010 EPM2AB3EWF7 344 aa9.94□□□□□ -0.82
VARS-228ENST00000495010 BOLA2-SMG1P6H3BVE0 249 aa9.94□□□□□ -0.82
VARS-228ENST00000495010 ANXA3P12429 323 aa9.94□□□□□ -0.82
VARS-228ENST00000495010 TAS2R60P59551 318 aa9.94□□□□□ -0.82
VARS-228ENST00000495010 OR5I1Q13606 314 aa9.94□□□□□ -0.82
VARS-228ENST00000495010 IGFL4Q6B9Z1 124 aa9.94□□□□□ -0.82
VARS-228ENST00000495010 LYZL2Q7Z4W2 148 aa9.94□□□□□ -0.82
VARS-228ENST00000495010 RNF182Q8N6D2 247 aa9.94□□□□□ -0.82
VARS-228ENST00000495010 BPIFCQ8NFQ6 507 aa9.94□□□□□ -0.82
VARS-228ENST00000495010 OR4D5Q8NGN0 318 aa9.94□□□□□ -0.82
VARS-228ENST00000495010 GNPNAT1Q96EK6 184 aaPredicted RBP9.94□□□□□ -0.82
VARS-228ENST00000495010 TMEM147Q9BVK8 224 aa9.94□□□□□ -0.82
VARS-228ENST00000495010 SLC25A39Q9BZJ4 359 aaPredicted RBP9.94□□□□□ -0.82
VARS-228ENST00000495010 PLAC8L1A1L4L8 177 aa9.93□□□□□ -0.82
VARS-228ENST00000495010 RGS5O15539 181 aa9.93□□□□□ -0.82
VARS-228ENST00000495010 IAPPP10997 89 aa9.93□□□□□ -0.82
VARS-228ENST00000495010 RPP30P78346 268 aaKnown RBP9.93□□□□□ -0.82
VARS-228ENST00000495010 SRPXP78539 464 aa9.93□□□□□ -0.82
VARS-228ENST00000495010 DLK1P80370 383 aa9.93□□□□□ -0.82
VARS-228ENST00000495010 HIST1H1AQ02539 215 aaPredicted RBP9.93□□□□□ -0.82
VARS-228ENST00000495010 TMEM144Q7Z5S9 345 aa9.93□□□□□ -0.82
VARS-228ENST00000495010 CLVS1Q8IUQ0 354 aaPredicted RBP9.93□□□□□ -0.82
VARS-228ENST00000495010 THAP8Q8NA92 274 aa9.93□□□□□ -0.82
VARS-228ENST00000495010 OR51S1Q8NGJ8 323 aa9.93□□□□□ -0.82
VARS-228ENST00000495010 OR10J6PQ8NGY7 276 aa9.93□□□□□ -0.82
VARS-228ENST00000495010 PIGBOS1A0A0B4J2F0 54 aa9.92□□□□□ -0.82
VARS-228ENST00000495010 ADAP1O75689 374 aa9.92□□□□□ -0.82
VARS-228ENST00000495010 BTF3P20290 206 aaKnown RBP9.92□□□□□ -0.82
VARS-228ENST00000495010 KRTAP10-2P60368 255 aa9.92□□□□□ -0.82
VARS-228ENST00000495010 LRRC20Q8TCA0 184 aa9.92□□□□□ -0.82
VARS-228ENST00000495010 UHRF2Q96PU4 802 aa9.92□□□□□ -0.82
VARS-228ENST00000495010 Q9H3A6 140 aa9.92□□□□□ -0.82
VARS-228ENST00000495010 NOP10Q9NPE3 64 aaKnown RBP9.92□□□□□ -0.82
VARS-228ENST00000495010 SCP2D1Q9UJQ7 156 aa9.92□□□□□ -0.82
VARS-228ENST00000495010 LRP1BQ9NZR2 4599 aa9.91□□□□□ -0.82
VARS-228ENST00000495010 IGKV1OR2-108A0A075B7D4 117 aa9.91□□□□□ -0.82
VARS-228ENST00000495010 TRAV26-1A0A087WT03 109 aa9.91□□□□□ -0.82
VARS-228ENST00000495010 TRAV8-2A0A0B4J237 113 aa9.91□□□□□ -0.82
VARS-228ENST00000495010 A0A1W2PPQ1 181 aa9.91□□□□□ -0.82
VARS-228ENST00000495010 MED6O75586 246 aa9.91□□□□□ -0.82
VARS-228ENST00000495010 AKR1C1Q04828 323 aa9.91□□□□□ -0.82
VARS-228ENST00000495010 ZNF493Q6ZR52 646 aa9.91□□□□□ -0.82
VARS-228ENST00000495010 SMIM4Q8WVI0 70 aa9.91□□□□□ -0.82
VARS-228ENST00000495010 C17orf77Q96MU5 243 aa9.91□□□□□ -0.82
VARS-228ENST00000495010 PTTG2Q9NZH5 202 aa9.91□□□□□ -0.82
VARS-228ENST00000495010 A0A0J9YY99 117 aa9.9□□□□□ -0.82
VARS-228ENST00000495010 INAFM2P0DMQ5 153 aa9.9□□□□□ -0.82
VARS-228ENST00000495010 M6PRP20645 277 aa9.9□□□□□ -0.82
VARS-228ENST00000495010 GATA2P23769 480 aaPredicted RBP9.9□□□□□ -0.82
VARS-228ENST00000495010 RAP2BP61225 183 aa9.9□□□□□ -0.82
VARS-228ENST00000495010 IL18Q14116 193 aa9.9□□□□□ -0.82
VARS-228ENST00000495010 RXFP4Q8TDU9 374 aa9.9□□□□□ -0.82
VARS-228ENST00000495010 CIB3Q96Q77 187 aaPredicted RBP9.9□□□□□ -0.82
VARS-228ENST00000495010 MCUBQ9NWR8 336 aa9.9□□□□□ -0.82
VARS-228ENST00000495010 EREGO14944 169 aa9.89□□□□□ -0.83
VARS-228ENST00000495010 RPL7P18124 248 aaKnown RBP9.89□□□□□ -0.83
VARS-228ENST00000495010 CCDC28AQ8IWP9 274 aa9.89□□□□□ -0.83
VARS-228ENST00000495010 OR8A1Q8NGG7 326 aa9.89□□□□□ -0.83
VARS-228ENST00000495010 TMEM263Q8WUH6 116 aaKnown RBP9.89□□□□□ -0.83
VARS-228ENST00000495010 ZNF503Q96F45 646 aa9.89□□□□□ -0.83
VARS-228ENST00000495010 UPK3BQ9BT76 320 aa9.89□□□□□ -0.83
VARS-228ENST00000495010 KRTAP1-5Q9BYS1 174 aa9.89□□□□□ -0.83
VARS-228ENST00000495010 ZNF586Q9NXT0 402 aa9.89□□□□□ -0.83
VARS-228ENST00000495010 DUXBA0A1W2PPF3 345 aa9.88□□□□□ -0.83
VARS-228ENST00000495010 H7BYZ3 331 aa9.88□□□□□ -0.83
VARS-228ENST00000495010 CDKN1BP46527 198 aa9.88□□□□□ -0.83
VARS-228ENST00000495010 PSG3Q16557 428 aa9.88□□□□□ -0.83
VARS-228ENST00000495010 S100A7AQ86SG5 101 aa9.88□□□□□ -0.83
VARS-228ENST00000495010 MIXL1Q9H2W2 232 aa9.88□□□□□ -0.83
VARS-228ENST00000495010 HIGD1AQ9Y241 93 aa9.88□□□□□ -0.83
VARS-228ENST00000495010 MRPS16Q9Y3D3 137 aaKnown RBP9.88□□□□□ -0.83
VARS-228ENST00000495010 SMCO3A2RU48 225 aa9.87□□□□□ -0.83
VARS-228ENST00000495010 H3BRN7 92 aa9.87□□□□□ -0.83
VARS-228ENST00000495010 ZNF701M0R085 212 aaPredicted RBP9.87□□□□□ -0.83
VARS-228ENST00000495010 WRBO00258 174 aa9.87□□□□□ -0.83
VARS-228ENST00000495010 CTDSPLO15194 276 aa9.87□□□□□ -0.83
VARS-228ENST00000495010 RLN2P04090 185 aa9.87□□□□□ -0.83
VARS-228ENST00000495010 IL5P05113 134 aa9.87□□□□□ -0.83
VARS-228ENST00000495010 ESRGQ1W209 222 aa9.87□□□□□ -0.83
VARS-228ENST00000495010 TMEM182Q6ZP80 229 aaPredicted RBP9.87□□□□□ -0.83
VARS-228ENST00000495010 RNASE8Q8TDE3 154 aaKnown RBP9.87□□□□□ -0.83
VARS-228ENST00000495010 DIRAS2Q96HU8 199 aa9.87□□□□□ -0.83
VARS-228ENST00000495010 NAA50Q9GZZ1 169 aaKnown RBP9.87□□□□□ -0.83
VARS-228ENST00000495010 PGPEP1Q9NXJ5 209 aa9.87□□□□□ -0.83
VARS-228ENST00000495010 RABL2AQ9UBK7 228 aaPredicted RBP9.87□□□□□ -0.83
VARS-228ENST00000495010 RABL2BQ9UNT1 228 aa9.87□□□□□ -0.83
VARS-228ENST00000495010 ANKRD20A5PA0PJZ0 165 aa9.86□□□□□ -0.83
VARS-228ENST00000495010 GAGE12BA1L429 117 aa9.86□□□□□ -0.83
VARS-228ENST00000495010 SNURFLB1AK76 121 aa9.86□□□□□ -0.83
VARS-228ENST00000495010 CTDSP2O14595 271 aa9.86□□□□□ -0.83
VARS-228ENST00000495010 SYNGR2O43760 224 aa9.86□□□□□ -0.83
VARS-228ENST00000495010 PITX3O75364 302 aa9.86□□□□□ -0.83
VARS-228ENST00000495010 HYPMO75409 117 aa9.86□□□□□ -0.83
VARS-228ENST00000495010 GAGE7O76087 117 aa9.86□□□□□ -0.83
VARS-228ENST00000495010 OR5G3P0C626 314 aa9.86□□□□□ -0.83
VARS-228ENST00000495010 GAGE12FP0CL80 117 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms