RNA–Protein interactions for RNA: ENST00000494334.1

COL1A1-208, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 396 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-208ENST00000494334 GPR82Q96P67 336 aa10.02□□□□□ -0.81
COL1A1-208ENST00000494334 TM2D3Q9BRN9 247 aa10.02□□□□□ -0.81
COL1A1-208ENST00000494334 WFDC1Q9HC57 220 aa10.02□□□□□ -0.81
COL1A1-208ENST00000494334 SEPSECSQ9HD40 501 aaKnown RBP10.02□□□□□ -0.81
COL1A1-208ENST00000494334 DNAJC4Q9NNZ3 241 aa10.02□□□□□ -0.81
COL1A1-208ENST00000494334 SLC39A9Q9NUM3 307 aa10.02□□□□□ -0.81
COL1A1-208ENST00000494334 PXMP4Q9Y6I8 212 aa10.02□□□□□ -0.81
COL1A1-208ENST00000494334 G3V3Q6 166 aa10.01□□□□□ -0.81
COL1A1-208ENST00000494334 SOCS3O14543 225 aa10.01□□□□□ -0.81
COL1A1-208ENST00000494334 C10orf113Q5VZT2 155 aa10.01□□□□□ -0.81
COL1A1-208ENST00000494334 OR1L4Q8NGR5 311 aa10.01□□□□□ -0.81
COL1A1-208ENST00000494334 AQP10Q96PS8 301 aa10.01□□□□□ -0.81
COL1A1-208ENST00000494334 RSG1Q9BU20 258 aa10.01□□□□□ -0.81
COL1A1-208ENST00000494334 MRPS12O15235 138 aaKnown RBP10□□□□□ -0.81
COL1A1-208ENST00000494334 RPL7P18124 248 aaKnown RBP10□□□□□ -0.81
COL1A1-208ENST00000494334 SNRPD3P62318 126 aaKnown RBP10□□□□□ -0.81
COL1A1-208ENST00000494334 PSMG4Q5JS54 123 aa10□□□□□ -0.81
COL1A1-208ENST00000494334 MORN5Q5VZ52 161 aa10□□□□□ -0.81
COL1A1-208ENST00000494334 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10□□□□□ -0.81
COL1A1-208ENST00000494334 ZMAT4Q9H898 229 aa10□□□□□ -0.81
COL1A1-208ENST00000494334 RNF24Q9Y225 148 aa10□□□□□ -0.81
COL1A1-208ENST00000494334 FXYD6-FXYD2A0A087WZ82 144 aa9.99□□□□□ -0.81
COL1A1-208ENST00000494334 IFNA5P01569 189 aa9.99□□□□□ -0.81
COL1A1-208ENST00000494334 RPL35AP18077 110 aaKnown RBP9.99□□□□□ -0.81
COL1A1-208ENST00000494334 ID1P41134 155 aa9.99□□□□□ -0.81
COL1A1-208ENST00000494334 MEOX2P50222 304 aa9.99□□□□□ -0.81
COL1A1-208ENST00000494334 GCSAMLQ5JQS6 135 aa9.99□□□□□ -0.81
COL1A1-208ENST00000494334 SCGB1C1Q8TD33 95 aa9.99□□□□□ -0.81
COL1A1-208ENST00000494334 PFDN5Q99471 154 aa9.99□□□□□ -0.81
COL1A1-208ENST00000494334 SPATA25Q9BR10 227 aa9.99□□□□□ -0.81
COL1A1-208ENST00000494334 U3KQK5 164 aa9.99□□□□□ -0.81
COL1A1-208ENST00000494334 TRAV5A0A0B4J249 113 aa9.98□□□□□ -0.81
COL1A1-208ENST00000494334 RNF222A6NCQ9 220 aa9.98□□□□□ -0.81
COL1A1-208ENST00000494334 KNCNA6PVL3 124 aa9.98□□□□□ -0.81
COL1A1-208ENST00000494334 C17orf112F2Z3M2 114 aa9.98□□□□□ -0.81
COL1A1-208ENST00000494334 PSMB3P49720 205 aa9.98□□□□□ -0.81
COL1A1-208ENST00000494334 Q6ZNX1 250 aa9.98□□□□□ -0.81
COL1A1-208ENST00000494334 ZNF709Q8N972 641 aa9.98□□□□□ -0.81
COL1A1-208ENST00000494334 INO80EQ8NBZ0 244 aaPredicted RBP9.98□□□□□ -0.81
COL1A1-208ENST00000494334 GATAD1Q8WUU5 269 aa9.98□□□□□ -0.81
COL1A1-208ENST00000494334 C16orf92Q96LL3 132 aa9.98□□□□□ -0.81
COL1A1-208ENST00000494334 PARD6GQ9BYG4 376 aaPredicted RBP9.98□□□□□ -0.81
COL1A1-208ENST00000494334 TNFSF18Q9UNG2 199 aa9.98□□□□□ -0.81
COL1A1-208ENST00000494334 TGP01266 2768 aa9.97□□□□□ -0.81
COL1A1-208ENST00000494334 A0A087X0K7 114 aa9.97□□□□□ -0.81
COL1A1-208ENST00000494334 KIR2DL5BA0A0G2JN68 375 aa9.97□□□□□ -0.81
COL1A1-208ENST00000494334 KIR2DL5BA0A0G2JPC4 375 aa9.97□□□□□ -0.81
COL1A1-208ENST00000494334 SMLR1H3BR10 107 aa9.97□□□□□ -0.81
COL1A1-208ENST00000494334 ISLRO14498 428 aa9.97□□□□□ -0.81
COL1A1-208ENST00000494334 ATF4P18848 351 aaPredicted RBP9.97□□□□□ -0.81
COL1A1-208ENST00000494334 APOC4P55056 127 aa9.97□□□□□ -0.81
COL1A1-208ENST00000494334 SAMD13Q5VXD3 122 aa9.97□□□□□ -0.81
COL1A1-208ENST00000494334 BPIFA4PQ86YQ2 179 aa9.97□□□□□ -0.81
COL1A1-208ENST00000494334 STHQ8IWL8 128 aa9.97□□□□□ -0.81
COL1A1-208ENST00000494334 KIR2DL5AQ8N109 375 aa9.97□□□□□ -0.81
COL1A1-208ENST00000494334 KIR2DL5BQ8NHK3 375 aa9.97□□□□□ -0.81
COL1A1-208ENST00000494334 LINC00052Q96N35 136 aa9.97□□□□□ -0.81
COL1A1-208ENST00000494334 RCHY1Q96PM5 261 aa9.97□□□□□ -0.81
COL1A1-208ENST00000494334 RETNQ9HD89 108 aa9.97□□□□□ -0.81
COL1A1-208ENST00000494334 KCNIP2Q9NS61 270 aa9.97□□□□□ -0.81
COL1A1-208ENST00000494334 TRAV8-2A0A0B4J237 113 aa9.96□□□□□ -0.82
COL1A1-208ENST00000494334 SNRPCP09234 159 aaKnown RBP9.96□□□□□ -0.82
COL1A1-208ENST00000494334 DEFB1P60022 68 aa9.96□□□□□ -0.82
COL1A1-208ENST00000494334 ACTL10Q5JWF8 245 aa9.96□□□□□ -0.82
COL1A1-208ENST00000494334 FAM78BQ5VT40 261 aa9.96□□□□□ -0.82
COL1A1-208ENST00000494334 IGFL4Q6B9Z1 124 aa9.96□□□□□ -0.82
COL1A1-208ENST00000494334 TRPT1Q86TN4 253 aaKnown RBP9.96□□□□□ -0.82
COL1A1-208ENST00000494334 C20orf173Q96LM9 149 aa9.96□□□□□ -0.82
COL1A1-208ENST00000494334 CSTL1Q9H114 145 aa9.96□□□□□ -0.82
COL1A1-208ENST00000494334 RFNGQ9Y644 331 aa9.96□□□□□ -0.82
COL1A1-208ENST00000494334 UBE2CO00762 179 aa9.95□□□□□ -0.82
COL1A1-208ENST00000494334 ZNF266Q14584 549 aa9.95□□□□□ -0.82
COL1A1-208ENST00000494334 GDF5OSQ5U4N7 250 aa9.95□□□□□ -0.82
COL1A1-208ENST00000494334 SPATA31B1PQ5VZV4 182 aa9.95□□□□□ -0.82
COL1A1-208ENST00000494334 H3BMM0 161 aa9.94□□□□□ -0.82
COL1A1-208ENST00000494334 H3BQ15 152 aa9.94□□□□□ -0.82
COL1A1-208ENST00000494334 ARPC5O15511 151 aa9.94□□□□□ -0.82
COL1A1-208ENST00000494334 IGLC2P0DOY2 106 aa9.94□□□□□ -0.82
COL1A1-208ENST00000494334 FFAR4Q5NUL3 377 aa9.94□□□□□ -0.82
COL1A1-208ENST00000494334 Q6ZWC4 215 aa9.94□□□□□ -0.82
COL1A1-208ENST00000494334 OR11H4Q8NGC9 324 aa9.94□□□□□ -0.82
COL1A1-208ENST00000494334 OVOL2Q9BRP0 275 aa9.94□□□□□ -0.82
COL1A1-208ENST00000494334 HRH4Q9H3N8 390 aa9.94□□□□□ -0.82
COL1A1-208ENST00000494334 SAV1Q9H4B6 383 aaPredicted RBP9.94□□□□□ -0.82
COL1A1-208ENST00000494334 TIMM9Q9Y5J7 89 aa9.94□□□□□ -0.82
COL1A1-208ENST00000494334 F6UB75 175 aa9.93□□□□□ -0.82
COL1A1-208ENST00000494334 H3BTX0 84 aa9.93□□□□□ -0.82
COL1A1-208ENST00000494334 HLA-DRB4P13762 266 aa9.93□□□□□ -0.82
COL1A1-208ENST00000494334 CXCL2P19875 107 aa9.93□□□□□ -0.82
COL1A1-208ENST00000494334 HLA-DMBP28068 263 aa9.93□□□□□ -0.82
COL1A1-208ENST00000494334 DEFB135Q30KP9 77 aa9.93□□□□□ -0.82
COL1A1-208ENST00000494334 LCN15Q6UWW0 184 aa9.93□□□□□ -0.82
COL1A1-208ENST00000494334 FOXI2Q6ZQN5 318 aa9.93□□□□□ -0.82
COL1A1-208ENST00000494334 MIR17HGQ75NE6 70 aa9.93□□□□□ -0.82
COL1A1-208ENST00000494334 RNF182Q8N6D2 247 aa9.93□□□□□ -0.82
COL1A1-208ENST00000494334 HSD17B11Q8NBQ5 300 aa9.93□□□□□ -0.82
COL1A1-208ENST00000494334 LRRC20Q8TCA0 184 aa9.93□□□□□ -0.82
COL1A1-208ENST00000494334 SAT2Q96F10 170 aaPredicted RBP9.93□□□□□ -0.82
COL1A1-208ENST00000494334 FAM167A-AS1Q96KT0 104 aa9.93□□□□□ -0.82
COL1A1-208ENST00000494334 SLC25A2Q9BXI2 301 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms