RNA–Protein interactions for RNA: ENST00000493683.5

RNF40-203, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 5,371 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-203ENST00000493683 RNASE2P10153 161 aaKnown RBP16.42■□□□□ 0.22
RNF40-203ENST00000493683 PRB3Q04118 309 aaPredicted RBP16.42■□□□□ 0.22
RNF40-203ENST00000493683 CT83Q5H943 113 aa16.42■□□□□ 0.22
RNF40-203ENST00000493683 NEGR1Q7Z3B1 354 aa16.41■□□□□ 0.22
RNF40-203ENST00000493683 CD59P13987 128 aa16.41■□□□□ 0.22
RNF40-203ENST00000493683 MPV17L2Q567V2 206 aa16.41■□□□□ 0.22
RNF40-203ENST00000493683 GATD1Q8NB37 220 aa16.41■□□□□ 0.22
RNF40-203ENST00000493683 TMEM158Q8WZ71 300 aa16.41■□□□□ 0.22
RNF40-203ENST00000493683 CSTL1Q9H114 145 aa16.41■□□□□ 0.22
RNF40-203ENST00000493683 A0A0G2JMZ2 1700 aa16.41■□□□□ 0.22
RNF40-203ENST00000493683 LRRC37A2A6NM11 1700 aa16.41■□□□□ 0.22
RNF40-203ENST00000493683 hDV102S1A0JD36 115 aa16.41■□□□□ 0.22
RNF40-203ENST00000493683 TMEM155Q4W5P6 130 aa16.41■□□□□ 0.22
RNF40-203ENST00000493683 MBD3L4A6NDZ8 208 aaPredicted RBP16.41■□□□□ 0.22
RNF40-203ENST00000493683 MBD3L3A6NE82 208 aaPredicted RBP16.41■□□□□ 0.22
RNF40-203ENST00000493683 MBD3L5A6NJ08 208 aaPredicted RBP16.41■□□□□ 0.22
RNF40-203ENST00000493683 B4DSR2 109 aa16.41■□□□□ 0.22
RNF40-203ENST00000493683 KIR3DS1Q14943 382 aa16.41■□□□□ 0.22
RNF40-203ENST00000493683 MBD3L2Q8NHZ7 208 aaPredicted RBP16.41■□□□□ 0.22
RNF40-203ENST00000493683 LSM4Q9Y4Z0 139 aaKnown RBP16.41■□□□□ 0.22
RNF40-203ENST00000493683 Q5PR19 223 aa16.4■□□□□ 0.22
RNF40-203ENST00000493683 LY6G5BQ8NDX9 201 aa16.4■□□□□ 0.22
RNF40-203ENST00000493683 SHANK2-AS3Q9BTD1 123 aa16.4■□□□□ 0.22
RNF40-203ENST00000493683 INSP01308 110 aa16.4■□□□□ 0.22
RNF40-203ENST00000493683 ZNF562Q6V9R5 426 aa16.4■□□□□ 0.22
RNF40-203ENST00000493683 SELLP14151 372 aa16.4■□□□□ 0.22
RNF40-203ENST00000493683 ERCC8Q13216 396 aa16.4■□□□□ 0.22
RNF40-203ENST00000493683 GBF1Q92538 1859 aa16.4■□□□□ 0.22
RNF40-203ENST00000493683 MDS2Q8NDY4 140 aa16.4■□□□□ 0.22
RNF40-203ENST00000493683 ZC2HC1BQ5TFG8 222 aa16.39■□□□□ 0.21
RNF40-203ENST00000493683 MYOFQ9NZM1 2061 aa16.39■□□□□ 0.21
RNF40-203ENST00000493683 TMEM75Q8N9X5 138 aa16.39■□□□□ 0.21
RNF40-203ENST00000493683 A0A087X0K7 114 aa16.38■□□□□ 0.21
RNF40-203ENST00000493683 A0A0U1RRA0 63 aa16.38■□□□□ 0.21
RNF40-203ENST00000493683 C20orf144Q9BQM9 153 aa16.38■□□□□ 0.21
RNF40-203ENST00000493683 CHAC1Q9BUX1 264 aa16.38■□□□□ 0.21
RNF40-203ENST00000493683 TIMM21Q9BVV7 248 aa16.38■□□□□ 0.21
RNF40-203ENST00000493683 SPANXDQ9BXN6 97 aa16.38■□□□□ 0.21
RNF40-203ENST00000493683 SCN2AQ99250 2005 aa16.38■□□□□ 0.21
RNF40-203ENST00000493683 PRTN3P24158 256 aa16.38■□□□□ 0.21
RNF40-203ENST00000493683 DMRTC2Q8IXT2 367 aaPredicted RBP16.38■□□□□ 0.21
RNF40-203ENST00000493683 NDUFB8O95169 186 aa16.37■□□□□ 0.21
RNF40-203ENST00000493683 SRD5A1P18405 259 aa16.37■□□□□ 0.21
RNF40-203ENST00000493683 IGKV1D-17A0A075B6S4 117 aa16.37■□□□□ 0.21
RNF40-203ENST00000493683 IGHG3P01860 377 aa16.37■□□□□ 0.21
RNF40-203ENST00000493683 LAMTOR3Q9UHA4 124 aa16.37■□□□□ 0.21
RNF40-203ENST00000493683 NCOR1P1Q9H4R4 102 aa16.37■□□□□ 0.21
RNF40-203ENST00000493683 MDC1Q14676 2089 aaKnown RBP16.37■□□□□ 0.21
RNF40-203ENST00000493683 TNFRSF6BO95407 300 aa16.37■□□□□ 0.21
RNF40-203ENST00000493683 TRGV1A0A0A0MS02 117 aa16.36■□□□□ 0.21
RNF40-203ENST00000493683 CNOT1A5YKK6 2376 aaKnown RBP16.36■□□□□ 0.21
RNF40-203ENST00000493683 PDCD11Q14690 1871 aaKnown RBP16.36■□□□□ 0.21
RNF40-203ENST00000493683 LILRA1O75019 489 aa16.36■□□□□ 0.21
RNF40-203ENST00000493683 SAP30O75446 220 aa16.36■□□□□ 0.21
RNF40-203ENST00000493683 ZNF664Q8N3J9 261 aa16.36■□□□□ 0.21
RNF40-203ENST00000493683 B3GALT5-AS1P59052 145 aa16.36■□□□□ 0.21
RNF40-203ENST00000493683 TRPT1Q86TN4 253 aaKnown RBP16.36■□□□□ 0.21
RNF40-203ENST00000493683 C14orf178Q8N769 122 aaPredicted RBP16.35■□□□□ 0.21
RNF40-203ENST00000493683 DOCK3Q8IZD9 2030 aa16.35■□□□□ 0.21
RNF40-203ENST00000493683 ABCA7Q8IZY2 2146 aa16.35■□□□□ 0.21
RNF40-203ENST00000493683 C6orf226Q5I0X4 101 aa16.35■□□□□ 0.21
RNF40-203ENST00000493683 NYNRINQ9P2P1 1898 aaKnown RBP16.35■□□□□ 0.21
RNF40-203ENST00000493683 CHD5Q8TDI0 1954 aa16.35■□□□□ 0.21
RNF40-203ENST00000493683 TRAV8-1A0A0A6YYK1 113 aa16.35■□□□□ 0.21
RNF40-203ENST00000493683 HIST1H4AP62805 103 aaKnown RBP16.35■□□□□ 0.21
RNF40-203ENST00000493683 ZNF474Q6S9Z5 364 aaPredicted RBP16.35■□□□□ 0.21
RNF40-203ENST00000493683 TMEM141Q96I45 108 aa16.35■□□□□ 0.21
RNF40-203ENST00000493683 LIME1Q9H400 295 aa16.35■□□□□ 0.21
RNF40-203ENST00000493683 VWC2LB2RUY7 222 aa16.35■□□□□ 0.21
RNF40-203ENST00000493683 F8WEM9 126 aa16.35■□□□□ 0.21
RNF40-203ENST00000493683 Q8TAT8 98 aa16.35■□□□□ 0.21
RNF40-203ENST00000493683 SSC4DQ8WTU2 575 aa16.34■□□□□ 0.21
RNF40-203ENST00000493683 TMEM249Q2WGJ8 235 aa16.34■□□□□ 0.21
RNF40-203ENST00000493683 BMPERQ8N8U9 685 aa16.34■□□□□ 0.21
RNF40-203ENST00000493683 DAZ1Q9NQZ3 744 aaKnown RBP16.34■□□□□ 0.21
RNF40-203ENST00000493683 LINC00527Q9UJ94 153 aa16.34■□□□□ 0.21
RNF40-203ENST00000493683 RNF166Q96A37 237 aaPredicted RBP16.34■□□□□ 0.21
RNF40-203ENST00000493683 RHODO00212 210 aa16.34■□□□□ 0.21
RNF40-203ENST00000493683 OCIAD2Q56VL3 154 aa16.34■□□□□ 0.21
RNF40-203ENST00000493683 AMN1Q8IY45 258 aa16.34■□□□□ 0.21
RNF40-203ENST00000493683 ADCYAP1P18509 176 aa16.33■□□□□ 0.21
RNF40-203ENST00000493683 YPEL3P61236 119 aaPredicted RBP16.33■□□□□ 0.21
RNF40-203ENST00000493683 KLRD1Q13241 179 aa16.33■□□□□ 0.21
RNF40-203ENST00000493683 C3orf36Q3SXR2 165 aa16.33■□□□□ 0.21
RNF40-203ENST00000493683 KLF12Q9Y4X4 402 aa16.33■□□□□ 0.21
RNF40-203ENST00000493683 H3BUX3 64 aa16.33■□□□□ 0.21
RNF40-203ENST00000493683 ANAPC10Q9UM13 185 aa16.33■□□□□ 0.21
RNF40-203ENST00000493683 FCN3O75636 299 aa16.33■□□□□ 0.2
RNF40-203ENST00000493683 LHFPL4Q7Z7J7 247 aa16.33■□□□□ 0.2
RNF40-203ENST00000493683 COX11Q9Y6N1 276 aa16.33■□□□□ 0.2
RNF40-203ENST00000493683 PRSS46E5RG02 174 aa16.33■□□□□ 0.2
RNF40-203ENST00000493683 WFDC12Q8WWY7 111 aa16.33■□□□□ 0.2
RNF40-203ENST00000493683 GAGE12BA1L429 117 aa16.32■□□□□ 0.2
RNF40-203ENST00000493683 CDK2AP2O75956 126 aa16.32■□□□□ 0.2
RNF40-203ENST00000493683 Q0VFX4 171 aa16.32■□□□□ 0.2
RNF40-203ENST00000493683 SS18Q15532 418 aa16.32■□□□□ 0.2
RNF40-203ENST00000493683 RHPN1-AS1Q9BWJ2 59 aa16.32■□□□□ 0.2
RNF40-203ENST00000493683 A0A0G2JRQ6 117 aa16.32■□□□□ 0.2
RNF40-203ENST00000493683 TMEM219Q86XT9 240 aa16.32■□□□□ 0.2
RNF40-203ENST00000493683 MESP1Q9BRJ9 268 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms