RNA–Protein interactions for RNA: ENST00000493608.1

COL6A3-214, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2

Gene COL6A3, Length 742 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-214ENST00000493608 LINC00476Q8WZB0 136 aa7.72□□□□□ -1.17
COL6A3-214ENST00000493608 RSG1Q9BU20 258 aa7.72□□□□□ -1.17
COL6A3-214ENST00000493608 C11orf68Q9H3H3 251 aaKnown RBP7.72□□□□□ -1.17
COL6A3-214ENST00000493608 SEPSECSQ9HD40 501 aaKnown RBP7.72□□□□□ -1.17
COL6A3-214ENST00000493608 TBC1D24Q9ULP9 559 aa7.72□□□□□ -1.17
COL6A3-214ENST00000493608 X6R8D5 127 aa7.72□□□□□ -1.17
COL6A3-214ENST00000493608 ZNF705EA8MWA4 302 aaPredicted RBP7.71□□□□□ -1.18
COL6A3-214ENST00000493608 SOCS3O14543 225 aa7.71□□□□□ -1.18
COL6A3-214ENST00000493608 CFDP00746 253 aaPredicted RBP7.71□□□□□ -1.18
COL6A3-214ENST00000493608 MBPP02686 304 aaPredicted RBP7.71□□□□□ -1.18
COL6A3-214ENST00000493608 HLA-DRB4P13762 266 aa7.71□□□□□ -1.18
COL6A3-214ENST00000493608 NUTF2P61970 127 aaKnown RBP7.71□□□□□ -1.18
COL6A3-214ENST00000493608 ARL16Q0P5N6 197 aa7.71□□□□□ -1.18
COL6A3-214ENST00000493608 TMEM41BQ5BJD5 291 aa7.71□□□□□ -1.18
COL6A3-214ENST00000493608 IGFL4Q6B9Z1 124 aa7.71□□□□□ -1.18
COL6A3-214ENST00000493608 TMEM14EPQ6UXP3 125 aa7.71□□□□□ -1.18
COL6A3-214ENST00000493608 OR4B1Q8NGF8 309 aa7.71□□□□□ -1.18
COL6A3-214ENST00000493608 C16orf92Q96LL3 132 aa7.71□□□□□ -1.18
COL6A3-214ENST00000493608 C20orf173Q96LM9 149 aa7.71□□□□□ -1.18
COL6A3-214ENST00000493608 C17orf77Q96MU5 243 aa7.71□□□□□ -1.18
COL6A3-214ENST00000493608 TMEM147Q9BVK8 224 aa7.71□□□□□ -1.18
COL6A3-214ENST00000493608 SCRT1Q9BWW7 348 aa7.71□□□□□ -1.18
COL6A3-214ENST00000493608 NUDT15Q9NV35 164 aa7.71□□□□□ -1.18
COL6A3-214ENST00000493608 RCL1Q9Y2P8 373 aaKnown RBP7.71□□□□□ -1.18
COL6A3-214ENST00000493608 HLA-DRB4X5D2U9 266 aa7.71□□□□□ -1.18
COL6A3-214ENST00000493608 IGHV3OR16-12A0A075B7B8 117 aa7.7□□□□□ -1.18
COL6A3-214ENST00000493608 C7orf66A4D0T2 115 aa7.7□□□□□ -1.18
COL6A3-214ENST00000493608 C5orf51A6NDU8 294 aa7.7□□□□□ -1.18
COL6A3-214ENST00000493608 PRB4P10163 310 aaPredicted RBP7.7□□□□□ -1.18
COL6A3-214ENST00000493608 MIFP14174 115 aa7.7□□□□□ -1.18
COL6A3-214ENST00000493608 GALR1P47211 349 aa7.7□□□□□ -1.18
COL6A3-214ENST00000493608 PSMB3P49720 205 aa7.7□□□□□ -1.18
COL6A3-214ENST00000493608 DLK1P80370 383 aa7.7□□□□□ -1.18
COL6A3-214ENST00000493608 FGL1Q08830 312 aa7.7□□□□□ -1.18
COL6A3-214ENST00000493608 CNPY1Q3B7I2 92 aa7.7□□□□□ -1.18
COL6A3-214ENST00000493608 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.7□□□□□ -1.18
COL6A3-214ENST00000493608 ZNF767PQ75MW2 155 aa7.7□□□□□ -1.18
COL6A3-214ENST00000493608 OR10P1Q8NGE3 313 aa7.7□□□□□ -1.18
COL6A3-214ENST00000493608 MFFQ9GZY8 342 aa7.7□□□□□ -1.18
COL6A3-214ENST00000493608 SLC35B3Q9H1N7 401 aa7.7□□□□□ -1.18
COL6A3-214ENST00000493608 SAV1Q9H4B6 383 aaPredicted RBP7.7□□□□□ -1.18
COL6A3-214ENST00000493608 LSM5Q9Y4Y9 91 aaKnown RBP7.7□□□□□ -1.18
COL6A3-214ENST00000493608 KMT2AQ03164 3969 aa7.69□□□□□ -1.18
COL6A3-214ENST00000493608 FAM240BA0A1B0GVZ2 78 aa7.69□□□□□ -1.18
COL6A3-214ENST00000493608 ISLRO14498 428 aa7.69□□□□□ -1.18
COL6A3-214ENST00000493608 HYPMO75409 117 aa7.69□□□□□ -1.18
COL6A3-214ENST00000493608 OR5G3P0C626 314 aa7.69□□□□□ -1.18
COL6A3-214ENST00000493608 LINC00869P0C866 280 aa7.69□□□□□ -1.18
COL6A3-214ENST00000493608 HLA-DMBP28068 263 aa7.69□□□□□ -1.18
COL6A3-214ENST00000493608 SLC38A11Q08AI6 406 aa7.69□□□□□ -1.18
COL6A3-214ENST00000493608 ZNF846Q147U1 533 aa7.69□□□□□ -1.18
COL6A3-214ENST00000493608 FAM78BQ5VT40 261 aa7.69□□□□□ -1.18
COL6A3-214ENST00000493608 EBLN2Q6P2I7 272 aa7.69□□□□□ -1.18
COL6A3-214ENST00000493608 FOXI2Q6ZQN5 318 aa7.69□□□□□ -1.18
COL6A3-214ENST00000493608 C12orf45Q8N5I9 185 aaPredicted RBP7.69□□□□□ -1.18
COL6A3-214ENST00000493608 ZNF431Q8TF32 576 aaPredicted RBP7.69□□□□□ -1.18
COL6A3-214ENST00000493608 UHRF2Q96PU4 802 aa7.69□□□□□ -1.18
COL6A3-214ENST00000493608 CCDC32Q9BV29 185 aa7.69□□□□□ -1.18
COL6A3-214ENST00000493608 C1QTNF4Q9BXJ3 329 aa7.69□□□□□ -1.18
COL6A3-214ENST00000493608 SLC25A39Q9BZJ4 359 aaPredicted RBP7.69□□□□□ -1.18
COL6A3-214ENST00000493608 ARL6Q9H0F7 186 aa7.69□□□□□ -1.18
COL6A3-214ENST00000493608 NPVFQ9HCQ7 196 aa7.69□□□□□ -1.18
COL6A3-214ENST00000493608 CELA1Q9UNI1 258 aa7.69□□□□□ -1.18
COL6A3-214ENST00000493608 HIGD1AQ9Y241 93 aa7.69□□□□□ -1.18
COL6A3-214ENST00000493608 IGLL5B9A064 214 aa7.68□□□□□ -1.18
COL6A3-214ENST00000493608 H3BRN7 92 aa7.68□□□□□ -1.18
COL6A3-214ENST00000493608 L7N2F9 121 aa7.68□□□□□ -1.18
COL6A3-214ENST00000493608 TSC22D2O75157 780 aa7.68□□□□□ -1.18
COL6A3-214ENST00000493608 SNRPCP09234 159 aaKnown RBP7.68□□□□□ -1.18
COL6A3-214ENST00000493608 ZNF705DP0CH99 300 aaPredicted RBP7.68□□□□□ -1.18
COL6A3-214ENST00000493608 ZNF705BP0CI00 300 aaPredicted RBP7.68□□□□□ -1.18
COL6A3-214ENST00000493608 BCAP31P51572 246 aa7.68□□□□□ -1.18
COL6A3-214ENST00000493608 TAS2R30P59541 319 aa7.68□□□□□ -1.18
COL6A3-214ENST00000493608 RAP2BP61225 183 aa7.68□□□□□ -1.18
COL6A3-214ENST00000493608 VAMP2P63027 116 aa7.68□□□□□ -1.18
COL6A3-214ENST00000493608 TEPPQ6URK8 271 aa7.68□□□□□ -1.18
COL6A3-214ENST00000493608 PATE2Q6UY27 113 aa7.68□□□□□ -1.18
COL6A3-214ENST00000493608 Q6ZTC4 211 aa7.68□□□□□ -1.18
COL6A3-214ENST00000493608 RNF182Q8N6D2 247 aa7.68□□□□□ -1.18
COL6A3-214ENST00000493608 RPRMQ9NS64 109 aa7.68□□□□□ -1.18
COL6A3-214ENST00000493608 MGAT4CQ9UBM8 478 aa7.68□□□□□ -1.18
COL6A3-214ENST00000493608 SLC45A2Q9UMX9 530 aa7.68□□□□□ -1.18
COL6A3-214ENST00000493608 TRAV8-2A0A0B4J237 113 aa7.67□□□□□ -1.18
COL6A3-214ENST00000493608 A0A0J9YX75 114 aa7.67□□□□□ -1.18
COL6A3-214ENST00000493608 FAM24AA6NFZ4 105 aa7.67□□□□□ -1.18
COL6A3-214ENST00000493608 K7EPK0 472 aa7.67□□□□□ -1.18
COL6A3-214ENST00000493608 GOSR2O14653 212 aa7.67□□□□□ -1.18
COL6A3-214ENST00000493608 DEDDO75618 318 aa7.67□□□□□ -1.18
COL6A3-214ENST00000493608 CST7O76096 145 aa7.67□□□□□ -1.18
COL6A3-214ENST00000493608 MEOX2P50222 304 aa7.67□□□□□ -1.18
COL6A3-214ENST00000493608 EMP1P54849 157 aa7.67□□□□□ -1.18
COL6A3-214ENST00000493608 SELENOTP62341 195 aa7.67□□□□□ -1.18
COL6A3-214ENST00000493608 PSG9Q00887 426 aa7.67□□□□□ -1.18
COL6A3-214ENST00000493608 RPP25LQ8N5L8 163 aaKnown RBP7.67□□□□□ -1.18
COL6A3-214ENST00000493608 ZNF709Q8N972 641 aa7.67□□□□□ -1.18
COL6A3-214ENST00000493608 C2CD4CQ8TF44 421 aa7.67□□□□□ -1.18
COL6A3-214ENST00000493608 C2orf50Q96LR7 162 aa7.67□□□□□ -1.18
COL6A3-214ENST00000493608 SHANK2-AS3Q9BTD1 123 aa7.67□□□□□ -1.18
COL6A3-214ENST00000493608 AGPAT2O15120 278 aa7.66□□□□□ -1.18
COL6A3-214ENST00000493608 CAV2P51636 162 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms