RNA–Protein interactions for RNA: ENST00000493582.5

HDAC4-210, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,188 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-210ENST00000493582 H3BMG7 143 aa9.35□□□□□ -0.91
HDAC4-210ENST00000493582 INSL3P51460 131 aa9.35□□□□□ -0.91
HDAC4-210ENST00000493582 CFAP161Q6P656 301 aa9.35□□□□□ -0.91
HDAC4-210ENST00000493582 SLC25A48Q6ZT89 311 aaKnown RBP9.35□□□□□ -0.91
HDAC4-210ENST00000493582 GOLT1AQ6ZVE7 132 aa9.35□□□□□ -0.91
HDAC4-210ENST00000493582 EXOC3-AS1Q8N2X6 119 aa9.35□□□□□ -0.91
HDAC4-210ENST00000493582 KBTBD11-OT1A0A1B0GTJ5 212 aa9.35□□□□□ -0.91
HDAC4-210ENST00000493582 ATP5IP56385 69 aaPredicted RBP9.35□□□□□ -0.91
HDAC4-210ENST00000493582 RIGQ13278 110 aa9.35□□□□□ -0.91
HDAC4-210ENST00000493582 AMTNQ6UX39 209 aa9.35□□□□□ -0.91
HDAC4-210ENST00000493582 Q86TA4 180 aa9.35□□□□□ -0.91
HDAC4-210ENST00000493582 MED13Q9UHV7 2174 aa9.35□□□□□ -0.91
HDAC4-210ENST00000493582 SRRM5B3KS81 715 aa9.34□□□□□ -0.91
HDAC4-210ENST00000493582 PEAR1Q5VY43 1037 aaPredicted RBP9.34□□□□□ -0.91
HDAC4-210ENST00000493582 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.34□□□□□ -0.91
HDAC4-210ENST00000493582 STXBP6Q8NFX7 210 aa9.34□□□□□ -0.91
HDAC4-210ENST00000493582 SMG1Q96Q15 3661 aaKnown RBP9.34□□□□□ -0.91
HDAC4-210ENST00000493582 DSCAMO60469 2012 aa9.34□□□□□ -0.91
HDAC4-210ENST00000493582 K7EQM0 130 aa9.34□□□□□ -0.91
HDAC4-210ENST00000493582 IFI27L1Q96BM0 104 aa9.34□□□□□ -0.91
HDAC4-210ENST00000493582 HARBI1Q96MB7 349 aa9.34□□□□□ -0.91
HDAC4-210ENST00000493582 SPATA25Q9BR10 227 aa9.34□□□□□ -0.91
HDAC4-210ENST00000493582 WDFY4Q6ZS81 3184 aa9.34□□□□□ -0.91
HDAC4-210ENST00000493582 J3QR89 54 aa9.34□□□□□ -0.91
HDAC4-210ENST00000493582 IGLV2-11P01706 119 aa9.34□□□□□ -0.91
HDAC4-210ENST00000493582 FOXI2Q6ZQN5 318 aa9.34□□□□□ -0.91
HDAC4-210ENST00000493582 PHLDA1Q8WV24 401 aaPredicted RBP9.34□□□□□ -0.91
HDAC4-210ENST00000493582 APELAP0DMC3 54 aa9.33□□□□□ -0.92
HDAC4-210ENST00000493582 AMN1Q8IY45 258 aa9.33□□□□□ -0.92
HDAC4-210ENST00000493582 TMEM213A2RRL7 107 aa9.33□□□□□ -0.92
HDAC4-210ENST00000493582 CGB1A6NKQ9 187 aa9.33□□□□□ -0.92
HDAC4-210ENST00000493582 GP9P14770 177 aa9.33□□□□□ -0.92
HDAC4-210ENST00000493582 DEFB108BQ8NET1 73 aa9.33□□□□□ -0.92
HDAC4-210ENST00000493582 PRELID3AQ96N28 172 aa9.33□□□□□ -0.92
HDAC4-210ENST00000493582 A0A1W2PRD5 423 aa9.32□□□□□ -0.92
HDAC4-210ENST00000493582 A0A1W2PRF3 423 aa9.32□□□□□ -0.92
HDAC4-210ENST00000493582 A0A1W2PRM7 423 aa9.32□□□□□ -0.92
HDAC4-210ENST00000493582 PRR33A8MZF0 331 aa9.32□□□□□ -0.92
HDAC4-210ENST00000493582 F8W1H4 67 aa9.32□□□□□ -0.92
HDAC4-210ENST00000493582 NDUFS7O75251 213 aa9.32□□□□□ -0.92
HDAC4-210ENST00000493582 HCP5Q6MZN7 132 aa9.32□□□□□ -0.92
HDAC4-210ENST00000493582 MOGAT3Q86VF5 341 aa9.32□□□□□ -0.92
HDAC4-210ENST00000493582 CHAC1Q9BUX1 264 aa9.32□□□□□ -0.92
HDAC4-210ENST00000493582 SSUH2Q9Y2M2 353 aa9.32□□□□□ -0.92
HDAC4-210ENST00000493582 TMSB15BA0A087X1C1 80 aa9.32□□□□□ -0.92
HDAC4-210ENST00000493582 C19orf67A6NJJ6 358 aa9.32□□□□□ -0.92
HDAC4-210ENST00000493582 SMKR1H3BMG3 65 aa9.32□□□□□ -0.92
HDAC4-210ENST00000493582 HBDP02042 147 aa9.32□□□□□ -0.92
HDAC4-210ENST00000493582 GEMIN7Q9H840 131 aaKnown RBP9.32□□□□□ -0.92
HDAC4-210ENST00000493582 C16orf97H3BN30 126 aa9.32□□□□□ -0.92
HDAC4-210ENST00000493582 ZCCHC24Q8N2G6 241 aaKnown RBP9.32□□□□□ -0.92
HDAC4-210ENST00000493582 THAP8Q8NA92 274 aa9.32□□□□□ -0.92
HDAC4-210ENST00000493582 MRPL20Q9BYC9 149 aaKnown RBP9.32□□□□□ -0.92
HDAC4-210ENST00000493582 SLC25A17O43808 307 aa9.31□□□□□ -0.92
HDAC4-210ENST00000493582 CECR9P0C854 216 aa9.31□□□□□ -0.92
HDAC4-210ENST00000493582 MEOX1P50221 254 aa9.31□□□□□ -0.92
HDAC4-210ENST00000493582 LOC400499M0QZD8 3231 aa9.31□□□□□ -0.92
HDAC4-210ENST00000493582 CRIP1P50238 77 aa9.31□□□□□ -0.92
HDAC4-210ENST00000493582 PLSCR4Q9NRQ2 329 aa9.31□□□□□ -0.92
HDAC4-210ENST00000493582 SPRR3Q9UBC9 169 aa9.31□□□□□ -0.92
HDAC4-210ENST00000493582 IGLL5B9A064 214 aa9.3□□□□□ -0.92
HDAC4-210ENST00000493582 E9PLD3 99 aa9.3□□□□□ -0.92
HDAC4-210ENST00000493582 MSMPQ1L6U9 139 aa9.3□□□□□ -0.92
HDAC4-210ENST00000493582 C20orf78Q9BR46 151 aa9.3□□□□□ -0.92
HDAC4-210ENST00000493582 TRBV25-1A0A075B6N4 114 aa9.3□□□□□ -0.92
HDAC4-210ENST00000493582 IGKV3-15P01624 115 aa9.3□□□□□ -0.92
HDAC4-210ENST00000493582 PPIFP30405 207 aaKnown RBP9.3□□□□□ -0.92
HDAC4-210ENST00000493582 MC5RP33032 325 aa9.3□□□□□ -0.92
HDAC4-210ENST00000493582 CNEP1R1Q8N9A8 125 aa9.3□□□□□ -0.92
HDAC4-210ENST00000493582 HHLA3Q9XRX5 114 aa9.3□□□□□ -0.92
HDAC4-210ENST00000493582 AGRNO00468 2067 aa9.3□□□□□ -0.92
HDAC4-210ENST00000493582 WI2-2373I1.2A0A1W2PRP0 233 aa9.3□□□□□ -0.92
HDAC4-210ENST00000493582 GTSCR1Q86UQ5 136 aa9.3□□□□□ -0.92
HDAC4-210ENST00000493582 ORMDL3Q8N138 153 aa9.3□□□□□ -0.92
HDAC4-210ENST00000493582 ZNF479Q96JC4 524 aa9.3□□□□□ -0.92
HDAC4-210ENST00000493582 C17orf77Q96MU5 243 aa9.3□□□□□ -0.92
HDAC4-210ENST00000493582 DSCAML1Q8TD84 2053 aa9.3□□□□□ -0.92
HDAC4-210ENST00000493582 NTN3O00634 580 aaPredicted RBP9.29□□□□□ -0.92
HDAC4-210ENST00000493582 TNFRSF1AP19438 455 aa9.29□□□□□ -0.92
HDAC4-210ENST00000493582 SUB1P53999 127 aaKnown RBP eCLIP9.29□□□□□ -0.92
HDAC4-210ENST00000493582 PAX8Q06710 450 aa9.29□□□□□ -0.92
HDAC4-210ENST00000493582 LYZL1Q6UWQ5 148 aa9.29□□□□□ -0.92
HDAC4-210ENST00000493582 MRAP2Q96G30 205 aa9.29□□□□□ -0.92
HDAC4-210ENST00000493582 CFIP05156 583 aa9.29□□□□□ -0.92
HDAC4-210ENST00000493582 DIAPH2-AS1Q14236 149 aa9.29□□□□□ -0.92
HDAC4-210ENST00000493582 TCTEX1D4Q5JR98 221 aa9.29□□□□□ -0.92
HDAC4-210ENST00000493582 FAM104BQ5XKR9 115 aa9.29□□□□□ -0.92
HDAC4-210ENST00000493582 ZNF562Q6V9R5 426 aa9.29□□□□□ -0.92
HDAC4-210ENST00000493582 SPRY3O43610 288 aa9.28□□□□□ -0.92
HDAC4-210ENST00000493582 NPYP01303 97 aa9.28□□□□□ -0.92
HDAC4-210ENST00000493582 KIR2DL2P43627 348 aaPredicted RBP9.28□□□□□ -0.92
HDAC4-210ENST00000493582 MRPL51Q4U2R6 128 aaKnown RBP9.28□□□□□ -0.92
HDAC4-210ENST00000493582 GAGE13Q4V321 117 aa9.28□□□□□ -0.92
HDAC4-210ENST00000493582 CEND1Q8N111 149 aa9.28□□□□□ -0.92
HDAC4-210ENST00000493582 OSR1Q8TAX0 266 aaPredicted RBP9.28□□□□□ -0.92
HDAC4-210ENST00000493582 TPSG1Q9NRR2 321 aa9.28□□□□□ -0.92
HDAC4-210ENST00000493582 C6orf15Q6UXA7 325 aaPredicted RBP9.28□□□□□ -0.92
HDAC4-210ENST00000493582 GATD1Q8NB37 220 aa9.28□□□□□ -0.92
HDAC4-210ENST00000493582 CCL13Q99616 98 aa9.28□□□□□ -0.92
HDAC4-210ENST00000493582 OTORQ9NRC9 128 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms