RNA–Protein interactions for RNA: ENST00000493220.5

NF1-215, Transcript of neurofibromin 1, humanhuman

TSL 2

Gene NF1, Length 5,691 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-215ENST00000493220 PTH2Q96A98 100 aa5.02□□□□□ -1.61
NF1-215ENST00000493220 TRAV26-1A0A087WT03 109 aa5.02□□□□□ -1.61
NF1-215ENST00000493220 IGHV3-35A0A0C4DH35 117 aa5.02□□□□□ -1.61
NF1-215ENST00000493220 NDUFA4O00483 81 aa5.02□□□□□ -1.61
NF1-215ENST00000493220 LY6G6DO95868 133 aa5.02□□□□□ -1.61
NF1-215ENST00000493220 FAM53AQ6NSI3 398 aaPredicted RBP5.02□□□□□ -1.61
NF1-215ENST00000493220 CACNA1HO95180 2353 aa5.02□□□□□ -1.61
NF1-215ENST00000493220 A0A1W2PPI3 338 aa5.02□□□□□ -1.61
NF1-215ENST00000493220 CLPSL1A2RUU4 121 aa5.02□□□□□ -1.61
NF1-215ENST00000493220 YPEL3P61236 119 aaPredicted RBP5.02□□□□□ -1.61
NF1-215ENST00000493220 FBLN7Q53RD9 439 aa5.02□□□□□ -1.61
NF1-215ENST00000493220 LYPD6Q86Y78 171 aa5.02□□□□□ -1.61
NF1-215ENST00000493220 EML6Q6ZMW3 1958 aa5.02□□□□□ -1.61
NF1-215ENST00000493220 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.02□□□□□ -1.61
NF1-215ENST00000493220 NBEAP1P0C6P0 100 aa5.02□□□□□ -1.61
NF1-215ENST00000493220 MRAP2Q96G30 205 aa5.02□□□□□ -1.61
NF1-215ENST00000493220 A6NDX4 124 aa5.01□□□□□ -1.61
NF1-215ENST00000493220 WIPF3A6NGB9 483 aa5.01□□□□□ -1.61
NF1-215ENST00000493220 DNAJC9-AS1A6NH13 148 aa5.01□□□□□ -1.61
NF1-215ENST00000493220 HIST2H2BCQ6DN03 193 aa5.01□□□□□ -1.61
NF1-215ENST00000493220 POLR3KQ9Y2Y1 108 aaPredicted RBP5.01□□□□□ -1.61
NF1-215ENST00000493220 A8MWL6 223 aa5.01□□□□□ -1.61
NF1-215ENST00000493220 LGALS1P09382 135 aaKnown RBP5.01□□□□□ -1.61
NF1-215ENST00000493220 CKS2P33552 79 aa5.01□□□□□ -1.61
NF1-215ENST00000493220 FAM159AQ6UWV7 190 aa5.01□□□□□ -1.61
NF1-215ENST00000493220 TMEM14EPQ6UXP3 125 aa5.01□□□□□ -1.61
NF1-215ENST00000493220 C5orf56Q8N8D9 126 aa5.01□□□□□ -1.61
NF1-215ENST00000493220 WDR83OSQ9Y284 106 aa5.01□□□□□ -1.61
NF1-215ENST00000493220 ESPL1Q14674 2120 aa5.01□□□□□ -1.61
NF1-215ENST00000493220 IGKV3OR2-268A0A0C4DH90 116 aa5.01□□□□□ -1.61
NF1-215ENST00000493220 C9orf66Q5T8R8 295 aa5.01□□□□□ -1.61
NF1-215ENST00000493220 C9orf139Q6ZV77 190 aa5.01□□□□□ -1.61
NF1-215ENST00000493220 C5orf24Q7Z6I8 188 aa5.01□□□□□ -1.61
NF1-215ENST00000493220 MRPL55Q7Z7F7 128 aaKnown RBP5.01□□□□□ -1.61
NF1-215ENST00000493220 GLMPQ8WWB7 406 aa5.01□□□□□ -1.61
NF1-215ENST00000493220 AJUBAQ96IF1 538 aa5.01□□□□□ -1.61
NF1-215ENST00000493220 C1QTNF4Q9BXJ3 329 aa5.01□□□□□ -1.61
NF1-215ENST00000493220 MPTX1A8MV57 137 aa5.01□□□□□ -1.61
NF1-215ENST00000493220 LYL1P12980 280 aa5.01□□□□□ -1.61
NF1-215ENST00000493220 SH3BGRL3Q9H299 93 aa5.01□□□□□ -1.61
NF1-215ENST00000493220 MAP1LC3AQ9H492 121 aa5.01□□□□□ -1.61
NF1-215ENST00000493220 ICE1Q9Y2F5 2266 aa5.01□□□□□ -1.61
NF1-215ENST00000493220 GAGE10A6NGK3 116 aa5.01□□□□□ -1.61
NF1-215ENST00000493220 NUDT3O95989 172 aa5.01□□□□□ -1.61
NF1-215ENST00000493220 PPP1R17O96001 155 aa5.01□□□□□ -1.61
NF1-215ENST00000493220 FABP2P12104 132 aa5.01□□□□□ -1.61
NF1-215ENST00000493220 MALP21145 153 aa5.01□□□□□ -1.61
NF1-215ENST00000493220 CYB561D1Q8N8Q1 229 aa5.01□□□□□ -1.61
NF1-215ENST00000493220 ZNF114Q8NC26 417 aa5.01□□□□□ -1.61
NF1-215ENST00000493220 C14orf144Q96I85 54 aa5.01□□□□□ -1.61
NF1-215ENST00000493220 IGHV3-49A0A0A0MS15 119 aa5□□□□□ -1.61
NF1-215ENST00000493220 OR11H12B2RN74 326 aa5□□□□□ -1.61
NF1-215ENST00000493220 IGLV1-47P01700 117 aa5□□□□□ -1.61
NF1-215ENST00000493220 AMBPP02760 352 aa5□□□□□ -1.61
NF1-215ENST00000493220 LGALS3P17931 250 aaKnown RBP5□□□□□ -1.61
NF1-215ENST00000493220 SRSF4Q08170 494 aaKnown RBP5□□□□□ -1.61
NF1-215ENST00000493220 CIRBPQ14011 172 aaKnown RBP5□□□□□ -1.61
NF1-215ENST00000493220 ICAM4Q14773 271 aa5□□□□□ -1.61
NF1-215ENST00000493220 MEIG1Q5JSS6 88 aa5□□□□□ -1.61
NF1-215ENST00000493220 DNLZQ5SXM8 178 aa5□□□□□ -1.61
NF1-215ENST00000493220 CIARTQ8N365 385 aaPredicted RBP5□□□□□ -1.61
NF1-215ENST00000493220 FAM110AQ9BQ89 295 aa5□□□□□ -1.61
NF1-215ENST00000493220 ARID1AO14497 2285 aa5□□□□□ -1.61
NF1-215ENST00000493220 DIAPH2-AS1Q14236 149 aa5□□□□□ -1.61
NF1-215ENST00000493220 TREML4Q6UXN2 200 aa5□□□□□ -1.61
NF1-215ENST00000493220 OR11H1Q8NG94 326 aa5□□□□□ -1.61
NF1-215ENST00000493220 DUX3Q96PT4 197 aa5□□□□□ -1.61
NF1-215ENST00000493220 HIST1H4GQ99525 98 aa5□□□□□ -1.61
NF1-215ENST00000493220 Q9H3A6 140 aa5□□□□□ -1.61
NF1-215ENST00000493220 SDF2L1Q9HCN8 221 aa5□□□□□ -1.61
NF1-215ENST00000493220 CACNA1BQ00975 2339 aa5□□□□□ -1.61
NF1-215ENST00000493220 PSG1P11464 419 aa5□□□□□ -1.61
NF1-215ENST00000493220 MDKP21741 143 aaPredicted RBP5□□□□□ -1.61
NF1-215ENST00000493220 C1orf194Q5T5A4 169 aa5□□□□□ -1.61
NF1-215ENST00000493220 KCNS1Q96KK3 526 aa5□□□□□ -1.61
NF1-215ENST00000493220 PHLDA3Q9Y5J5 127 aa5□□□□□ -1.61
NF1-215ENST00000493220 COX11Q9Y6N1 276 aa5□□□□□ -1.61
NF1-215ENST00000493220 APC2O95996 2303 aa5□□□□□ -1.61
NF1-215ENST00000493220 IGHV3OR16-13A0A075B7E8 117 aa5□□□□□ -1.61
NF1-215ENST00000493220 IGHV3-74A0A0B4J1X5 117 aa5□□□□□ -1.61
NF1-215ENST00000493220 MEF2BQ02080 365 aaPredicted RBP5□□□□□ -1.61
NF1-215ENST00000493220 C4orf3Q8WVX3 66 aa5□□□□□ -1.61
NF1-215ENST00000493220 HSPB9Q9BQS6 159 aa5□□□□□ -1.61
NF1-215ENST00000493220 RNF126Q9BV68 326 aa5□□□□□ -1.61
NF1-215ENST00000493220 SLC25A39Q9BZJ4 359 aaPredicted RBP5□□□□□ -1.61
NF1-215ENST00000493220 MRPS16Q9Y3D3 137 aaKnown RBP5□□□□□ -1.61
NF1-215ENST00000493220 EXPH5Q8NEV8 1989 aa5□□□□□ -1.61
NF1-215ENST00000493220 MYCNOSP40205 109 aa4.99□□□□□ -1.61
NF1-215ENST00000493220 SYNJ2BPP57105 145 aa4.99□□□□□ -1.61
NF1-215ENST00000493220 MIR17HGQ75NE6 70 aa4.99□□□□□ -1.61
NF1-215ENST00000493220 HAPLN4Q86UW8 402 aa4.99□□□□□ -1.61
NF1-215ENST00000493220 LINC01587Q99440 93 aa4.99□□□□□ -1.61
NF1-215ENST00000493220 DERL1Q9BUN8 251 aa4.99□□□□□ -1.61
NF1-215ENST00000493220 MRPL27Q9P0M9 148 aaKnown RBP4.99□□□□□ -1.61
NF1-215ENST00000493220 TRGV11A0A075B6L2 103 aa4.99□□□□□ -1.61
NF1-215ENST00000493220 VWC2LB2RUY7 222 aa4.99□□□□□ -1.61
NF1-215ENST00000493220 INAFM1C9JVW0 142 aa4.99□□□□□ -1.61
NF1-215ENST00000493220 F5H768 121 aa4.99□□□□□ -1.61
NF1-215ENST00000493220 G3V318 75 aa4.99□□□□□ -1.61
NF1-215ENST00000493220 NDUFB4O95168 129 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms