RNA–Protein interactions for RNA: ENST00000493207.1

RER1-208, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 2

Gene RER1, Length 686 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-208ENST00000493207 PFDN5Q99471 154 aa12.54□□□□□ -0.4
RER1-208ENST00000493207 PARD6GQ9BYG4 376 aaPredicted RBP12.54□□□□□ -0.4
RER1-208ENST00000493207 MAP6D1Q9H9H5 199 aa12.54□□□□□ -0.4
RER1-208ENST00000493207 KCNIP2Q9NS61 270 aa12.54□□□□□ -0.4
RER1-208ENST00000493207 ARPC5O15511 151 aa12.53□□□□□ -0.4
RER1-208ENST00000493207 CMC4P56277 68 aaPredicted RBP12.53□□□□□ -0.4
RER1-208ENST00000493207 MORN5Q5VZ52 161 aa12.53□□□□□ -0.4
RER1-208ENST00000493207 GPR82Q96P67 336 aa12.53□□□□□ -0.4
RER1-208ENST00000493207 CITED4Q96RK1 184 aa12.53□□□□□ -0.4
RER1-208ENST00000493207 B9D2Q9BPU9 175 aa12.53□□□□□ -0.4
RER1-208ENST00000493207 FAM110AQ9BQ89 295 aa12.53□□□□□ -0.4
RER1-208ENST00000493207 ZNF688P0C7X2 276 aa12.52□□□□□ -0.41
RER1-208ENST00000493207 ZNF266Q14584 549 aa12.52□□□□□ -0.41
RER1-208ENST00000493207 ZNF124Q15973 351 aa12.52□□□□□ -0.41
RER1-208ENST00000493207 GCSAMLQ5JQS6 135 aa12.52□□□□□ -0.41
RER1-208ENST00000493207 ST6GAL2Q96JF0 529 aa12.52□□□□□ -0.41
RER1-208ENST00000493207 RBMY1BA6NDE4 496 aaKnown RBP12.51□□□□□ -0.41
RER1-208ENST00000493207 RBMY1EA6NEQ0 496 aaKnown RBP12.51□□□□□ -0.41
RER1-208ENST00000493207 RBMY1DP0C7P1 496 aaKnown RBP12.51□□□□□ -0.41
RER1-208ENST00000493207 RPL7P18124 248 aaKnown RBP12.51□□□□□ -0.41
RER1-208ENST00000493207 ATF4P18848 351 aaPredicted RBP12.51□□□□□ -0.41
RER1-208ENST00000493207 DEFB131AP59861 70 aa12.51□□□□□ -0.41
RER1-208ENST00000493207 OR11H4Q8NGC9 324 aa12.51□□□□□ -0.41
RER1-208ENST00000493207 GATAD1Q8WUU5 269 aa12.51□□□□□ -0.41
RER1-208ENST00000493207 ASCL2Q99929 193 aa12.51□□□□□ -0.41
RER1-208ENST00000493207 MFFQ9GZY8 342 aa12.51□□□□□ -0.41
RER1-208ENST00000493207 RNF24Q9Y225 148 aa12.51□□□□□ -0.41
RER1-208ENST00000493207 RFNGQ9Y644 331 aa12.51□□□□□ -0.41
RER1-208ENST00000493207 TRAV5A0A0B4J249 113 aa12.5□□□□□ -0.41
RER1-208ENST00000493207 SNRPD3P62318 126 aaKnown RBP12.5□□□□□ -0.41
RER1-208ENST00000493207 PSMG4Q5JS54 123 aa12.5□□□□□ -0.41
RER1-208ENST00000493207 FFAR4Q5NUL3 377 aa12.5□□□□□ -0.41
RER1-208ENST00000493207 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.5□□□□□ -0.41
RER1-208ENST00000493207 SBSPONQ8IVN8 264 aa12.5□□□□□ -0.41
RER1-208ENST00000493207 HSD17B11Q8NBQ5 300 aa12.5□□□□□ -0.41
RER1-208ENST00000493207 C17orf77Q96MU5 243 aa12.5□□□□□ -0.41
RER1-208ENST00000493207 A0A1B0GVG6 124 aa12.49□□□□□ -0.41
RER1-208ENST00000493207 SOCS3O14543 225 aa12.49□□□□□ -0.41
RER1-208ENST00000493207 BPIFA4PQ86YQ2 179 aa12.49□□□□□ -0.41
RER1-208ENST00000493207 MRPS12O15235 138 aaKnown RBP12.48□□□□□ -0.41
RER1-208ENST00000493207 ID1P41134 155 aa12.48□□□□□ -0.41
RER1-208ENST00000493207 PSMB3P49720 205 aa12.48□□□□□ -0.41
RER1-208ENST00000493207 MEOX2P50222 304 aa12.48□□□□□ -0.41
RER1-208ENST00000493207 FAM78BQ5VT40 261 aa12.48□□□□□ -0.41
RER1-208ENST00000493207 RPL7L1Q6DKI1 246 aaKnown RBP12.48□□□□□ -0.41
RER1-208ENST00000493207 LINC00322Q6ZN03 302 aaPredicted RBP12.48□□□□□ -0.41
RER1-208ENST00000493207 TCTE3Q8IZS6 198 aa12.48□□□□□ -0.41
RER1-208ENST00000493207 C16orf92Q96LL3 132 aa12.48□□□□□ -0.41
RER1-208ENST00000493207 SEPSECSQ9HD40 501 aaKnown RBP12.48□□□□□ -0.41
RER1-208ENST00000493207 TIMM9Q9Y5J7 89 aa12.48□□□□□ -0.41
RER1-208ENST00000493207 A0A087X0K7 114 aa12.47□□□□□ -0.41
RER1-208ENST00000493207 LOC102724200A0A096LPH7 203 aaPredicted RBP12.47□□□□□ -0.41
RER1-208ENST00000493207 BORCS7-ASMTA0A0B4J1R7 106 aa12.47□□□□□ -0.41
RER1-208ENST00000493207 HMSDA8MTL9 139 aa12.47□□□□□ -0.41
RER1-208ENST00000493207 SNRPCP09234 159 aaKnown RBP12.47□□□□□ -0.41
RER1-208ENST00000493207 HAGHQ16775 308 aa12.47□□□□□ -0.41
RER1-208ENST00000493207 SPATA31B1PQ5VZV4 182 aa12.47□□□□□ -0.41
RER1-208ENST00000493207 AKAP14Q86UN6 197 aa12.47□□□□□ -0.41
RER1-208ENST00000493207 LINC00052Q96N35 136 aa12.47□□□□□ -0.41
RER1-208ENST00000493207 COL7A1Q02388 2944 aa12.46□□□□□ -0.41
RER1-208ENST00000493207 KNCNA6PVL3 124 aa12.46□□□□□ -0.41
RER1-208ENST00000493207 ISLRO14498 428 aa12.46□□□□□ -0.41
RER1-208ENST00000493207 TAAR5O14804 337 aa12.46□□□□□ -0.41
RER1-208ENST00000493207 RPL35AP18077 110 aaKnown RBP12.46□□□□□ -0.41
RER1-208ENST00000493207 ATP6V0CP27449 155 aa12.46□□□□□ -0.41
RER1-208ENST00000493207 ZNF345Q14585 488 aa12.46□□□□□ -0.41
RER1-208ENST00000493207 SAMD13Q5VXD3 122 aa12.46□□□□□ -0.41
RER1-208ENST00000493207 MIR17HGQ75NE6 70 aa12.46□□□□□ -0.41
RER1-208ENST00000493207 KCNRGQ8N5I3 272 aa12.46□□□□□ -0.41
RER1-208ENST00000493207 SLC25A2Q9BXI2 301 aa12.46□□□□□ -0.41
RER1-208ENST00000493207 SH3BGRL3Q9H299 93 aa12.46□□□□□ -0.41
RER1-208ENST00000493207 CXCL2P19875 107 aa12.45□□□□□ -0.42
RER1-208ENST00000493207 ACOT6Q3I5F7 207 aaPredicted RBP12.45□□□□□ -0.42
RER1-208ENST00000493207 IGFL4Q6B9Z1 124 aa12.45□□□□□ -0.42
RER1-208ENST00000493207 STHQ8IWL8 128 aa12.45□□□□□ -0.42
RER1-208ENST00000493207 C20orf173Q96LM9 149 aa12.45□□□□□ -0.42
RER1-208ENST00000493207 ARPC5LQ9BPX5 153 aa12.45□□□□□ -0.42
RER1-208ENST00000493207 PSMG3Q9BT73 122 aaPredicted RBP12.45□□□□□ -0.42
RER1-208ENST00000493207 MRPL32Q9BYC8 188 aaKnown RBP12.45□□□□□ -0.42
RER1-208ENST00000493207 FUT9Q9Y231 359 aa12.45□□□□□ -0.42
RER1-208ENST00000493207 TRAV8-2A0A0B4J237 113 aa12.44□□□□□ -0.42
RER1-208ENST00000493207 H3BTX0 84 aa12.44□□□□□ -0.42
RER1-208ENST00000493207 IGLC2P0DOY2 106 aa12.44□□□□□ -0.42
RER1-208ENST00000493207 M6PRP20645 277 aa12.44□□□□□ -0.42
RER1-208ENST00000493207 ACTL10Q5JWF8 245 aa12.44□□□□□ -0.42
RER1-208ENST00000493207 RNF182Q8N6D2 247 aa12.44□□□□□ -0.42
RER1-208ENST00000493207 LRRC20Q8TCA0 184 aa12.44□□□□□ -0.42
RER1-208ENST00000493207 CYTL1Q9NRR1 136 aa12.44□□□□□ -0.42
RER1-208ENST00000493207 TGP01266 2768 aa12.43□□□□□ -0.42
RER1-208ENST00000493207 A0A0D9SG52 128 aa12.43□□□□□ -0.42
RER1-208ENST00000493207 H3BQ15 152 aa12.43□□□□□ -0.42
RER1-208ENST00000493207 JTBO76095 146 aa12.43□□□□□ -0.42
RER1-208ENST00000493207 NHLRC4P0CG21 123 aaPredicted RBP12.43□□□□□ -0.42
RER1-208ENST00000493207 PYYP10082 97 aa12.43□□□□□ -0.42
RER1-208ENST00000493207 DEFB1P60022 68 aa12.43□□□□□ -0.42
RER1-208ENST00000493207 RAB2AP61019 212 aa12.43□□□□□ -0.42
RER1-208ENST00000493207 RHOBP62745 196 aa12.43□□□□□ -0.42
RER1-208ENST00000493207 LCN15Q6UWW0 184 aa12.43□□□□□ -0.42
RER1-208ENST00000493207 OR2G3Q8NGZ4 309 aa12.43□□□□□ -0.42
RER1-208ENST00000493207 GNPNAT1Q96EK6 184 aaPredicted RBP12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms