RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-217ENST00000492883 NPCDR1Q9BY65 106 aa10.37□□□□□ -0.75
CCM2-217ENST00000492883 WDR61Q9GZS3 305 aaKnown RBP10.37□□□□□ -0.75
CCM2-217ENST00000492883 SLC25A32Q9H2D1 315 aa10.37□□□□□ -0.75
CCM2-217ENST00000492883 ZMAT4Q9H898 229 aa10.37□□□□□ -0.75
CCM2-217ENST00000492883 DNAJC4Q9NNZ3 241 aa10.37□□□□□ -0.75
CCM2-217ENST00000492883 PXMP4Q9Y6I8 212 aa10.37□□□□□ -0.75
CCM2-217ENST00000492883 RPL35AP18077 110 aaKnown RBP10.36□□□□□ -0.75
CCM2-217ENST00000492883 RPL7P18124 248 aaKnown RBP10.36□□□□□ -0.75
CCM2-217ENST00000492883 ID1P41134 155 aa10.36□□□□□ -0.75
CCM2-217ENST00000492883 PSMG4Q5JS54 123 aa10.36□□□□□ -0.75
CCM2-217ENST00000492883 TMEM37Q8WXS4 190 aa10.36□□□□□ -0.75
CCM2-217ENST00000492883 FXYD6-FXYD2A0A087WZ82 144 aa10.35□□□□□ -0.75
CCM2-217ENST00000492883 C17orf112F2Z3M2 114 aa10.35□□□□□ -0.75
CCM2-217ENST00000492883 INO80EQ8NBZ0 244 aaPredicted RBP10.35□□□□□ -0.75
CCM2-217ENST00000492883 LINC00052Q96N35 136 aa10.35□□□□□ -0.75
CCM2-217ENST00000492883 PFDN5Q99471 154 aa10.35□□□□□ -0.75
CCM2-217ENST00000492883 SEPSECSQ9HD40 501 aaKnown RBP10.35□□□□□ -0.75
CCM2-217ENST00000492883 DNAH3Q8TD57 4116 aa10.35□□□□□ -0.75
CCM2-217ENST00000492883 SORL1Q92673 2214 aa10.34□□□□□ -0.75
CCM2-217ENST00000492883 ATF4P18848 351 aaPredicted RBP10.34□□□□□ -0.75
CCM2-217ENST00000492883 MEOX2P50222 304 aa10.34□□□□□ -0.75
CCM2-217ENST00000492883 APOC4P55056 127 aa10.34□□□□□ -0.75
CCM2-217ENST00000492883 SAMD13Q5VXD3 122 aa10.34□□□□□ -0.75
CCM2-217ENST00000492883 C16orf92Q96LL3 132 aa10.34□□□□□ -0.75
CCM2-217ENST00000492883 AQP10Q96PS8 301 aa10.34□□□□□ -0.75
CCM2-217ENST00000492883 SPATA25Q9BR10 227 aa10.34□□□□□ -0.75
CCM2-217ENST00000492883 TM2D3Q9BRN9 247 aa10.34□□□□□ -0.75
CCM2-217ENST00000492883 WFDC1Q9HC57 220 aa10.34□□□□□ -0.75
CCM2-217ENST00000492883 KCNIP2Q9NS61 270 aa10.34□□□□□ -0.75
CCM2-217ENST00000492883 U3KQK5 164 aa10.34□□□□□ -0.75
CCM2-217ENST00000492883 KNCNA6PVL3 124 aa10.33□□□□□ -0.76
CCM2-217ENST00000492883 PSMB3P49720 205 aa10.33□□□□□ -0.76
CCM2-217ENST00000492883 BPIFA4PQ86YQ2 179 aa10.33□□□□□ -0.76
CCM2-217ENST00000492883 STHQ8IWL8 128 aa10.33□□□□□ -0.76
CCM2-217ENST00000492883 GATAD1Q8WUU5 269 aa10.33□□□□□ -0.76
CCM2-217ENST00000492883 ISLRO14498 428 aa10.32□□□□□ -0.76
CCM2-217ENST00000492883 ACTL10Q5JWF8 245 aa10.32□□□□□ -0.76
CCM2-217ENST00000492883 MORN5Q5VZ52 161 aa10.32□□□□□ -0.76
CCM2-217ENST00000492883 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.32□□□□□ -0.76
CCM2-217ENST00000492883 LRRC20Q8TCA0 184 aa10.32□□□□□ -0.76
CCM2-217ENST00000492883 RCHY1Q96PM5 261 aa10.32□□□□□ -0.76
CCM2-217ENST00000492883 TRAV5A0A0B4J249 113 aa10.31□□□□□ -0.76
CCM2-217ENST00000492883 KIR2DL5BA0A0G2JN68 375 aa10.31□□□□□ -0.76
CCM2-217ENST00000492883 KIR2DL5BA0A0G2JPC4 375 aa10.31□□□□□ -0.76
CCM2-217ENST00000492883 SMLR1H3BR10 107 aa10.31□□□□□ -0.76
CCM2-217ENST00000492883 UBE2CO00762 179 aa10.31□□□□□ -0.76
CCM2-217ENST00000492883 SOCS3O14543 225 aa10.31□□□□□ -0.76
CCM2-217ENST00000492883 ZNF266Q14584 549 aa10.31□□□□□ -0.76
CCM2-217ENST00000492883 GCSAMLQ5JQS6 135 aa10.31□□□□□ -0.76
CCM2-217ENST00000492883 FAM78BQ5VT40 261 aa10.31□□□□□ -0.76
CCM2-217ENST00000492883 KIR2DL5AQ8N109 375 aa10.31□□□□□ -0.76
CCM2-217ENST00000492883 KIR2DL5BQ8NHK3 375 aa10.31□□□□□ -0.76
CCM2-217ENST00000492883 PARD6GQ9BYG4 376 aaPredicted RBP10.31□□□□□ -0.76
CCM2-217ENST00000492883 CSTL1Q9H114 145 aa10.31□□□□□ -0.76
CCM2-217ENST00000492883 TNFSF18Q9UNG2 199 aa10.31□□□□□ -0.76
CCM2-217ENST00000492883 SNRPCP09234 159 aaKnown RBP10.3□□□□□ -0.76
CCM2-217ENST00000492883 FFAR4Q5NUL3 377 aa10.3□□□□□ -0.76
CCM2-217ENST00000492883 IGFL4Q6B9Z1 124 aa10.3□□□□□ -0.76
CCM2-217ENST00000492883 C17orf77Q96MU5 243 aa10.3□□□□□ -0.76
CCM2-217ENST00000492883 RETNQ9HD89 108 aa10.3□□□□□ -0.76
CCM2-217ENST00000492883 A0A087X0K7 114 aa10.29□□□□□ -0.76
CCM2-217ENST00000492883 RNF222A6NCQ9 220 aa10.29□□□□□ -0.76
CCM2-217ENST00000492883 G3V3Q6 166 aa10.29□□□□□ -0.76
CCM2-217ENST00000492883 MRPS12O15235 138 aaKnown RBP10.29□□□□□ -0.76
CCM2-217ENST00000492883 ARPC5O15511 151 aa10.29□□□□□ -0.76
CCM2-217ENST00000492883 EBLN2Q6P2I7 272 aa10.29□□□□□ -0.76
CCM2-217ENST00000492883 Q6ZNX1 250 aa10.29□□□□□ -0.76
CCM2-217ENST00000492883 RPRMQ9NS64 109 aa10.29□□□□□ -0.76
CCM2-217ENST00000492883 DEFB1P60022 68 aa10.28□□□□□ -0.76
CCM2-217ENST00000492883 LCN15Q6UWW0 184 aa10.28□□□□□ -0.76
CCM2-217ENST00000492883 FOXI2Q6ZQN5 318 aa10.28□□□□□ -0.76
CCM2-217ENST00000492883 Q6ZWC4 215 aa10.28□□□□□ -0.76
CCM2-217ENST00000492883 TRPT1Q86TN4 253 aaKnown RBP10.28□□□□□ -0.76
CCM2-217ENST00000492883 HSD17B11Q8NBQ5 300 aa10.28□□□□□ -0.76
CCM2-217ENST00000492883 C20orf173Q96LM9 149 aa10.28□□□□□ -0.76
CCM2-217ENST00000492883 MFFQ9GZY8 342 aa10.28□□□□□ -0.76
CCM2-217ENST00000492883 HRH4Q9H3N8 390 aa10.28□□□□□ -0.76
CCM2-217ENST00000492883 BORCS7-ASMTA0A0B4J1R7 106 aa10.27□□□□□ -0.77
CCM2-217ENST00000492883 TRAV8-2A0A0B4J237 113 aa10.27□□□□□ -0.77
CCM2-217ENST00000492883 H3BMM0 161 aa10.27□□□□□ -0.77
CCM2-217ENST00000492883 H3BTX0 84 aa10.27□□□□□ -0.77
CCM2-217ENST00000492883 SPRY2O43597 315 aa10.27□□□□□ -0.77
CCM2-217ENST00000492883 CA1P00915 261 aaPredicted RBP10.27□□□□□ -0.77
CCM2-217ENST00000492883 CXCL2P19875 107 aa10.27□□□□□ -0.77
CCM2-217ENST00000492883 GUK1Q16774 197 aa10.27□□□□□ -0.77
CCM2-217ENST00000492883 DEFB135Q30KP9 77 aa10.27□□□□□ -0.77
CCM2-217ENST00000492883 ACOT6Q3I5F7 207 aaPredicted RBP10.27□□□□□ -0.77
CCM2-217ENST00000492883 SPATA31B1PQ5VZV4 182 aa10.27□□□□□ -0.77
CCM2-217ENST00000492883 MORN3Q6PF18 240 aaPredicted RBP10.27□□□□□ -0.77
CCM2-217ENST00000492883 MIR17HGQ75NE6 70 aa10.27□□□□□ -0.77
CCM2-217ENST00000492883 RNF182Q8N6D2 247 aa10.27□□□□□ -0.77
CCM2-217ENST00000492883 MRPL32Q9BYC8 188 aaKnown RBP10.27□□□□□ -0.77
CCM2-217ENST00000492883 SAV1Q9H4B6 383 aaPredicted RBP10.27□□□□□ -0.77
CCM2-217ENST00000492883 FUT9Q9Y231 359 aa10.27□□□□□ -0.77
CCM2-217ENST00000492883 TIMM9Q9Y5J7 89 aa10.27□□□□□ -0.77
CCM2-217ENST00000492883 RFNGQ9Y644 331 aa10.27□□□□□ -0.77
CCM2-217ENST00000492883 H3BQ15 152 aa10.26□□□□□ -0.77
CCM2-217ENST00000492883 IGKV3-20P01619 116 aa10.26□□□□□ -0.77
CCM2-217ENST00000492883 IGLC2P0DOY2 106 aa10.26□□□□□ -0.77
CCM2-217ENST00000492883 SPP1P10451 314 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms