RNA–Protein interactions for RNA: ENST00000492728.1

CHD1L-209, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 2

Gene CHD1L, Length 662 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-209ENST00000492728 RFNGQ9Y644 331 aa13.15□□□□□ -0.3
CHD1L-209ENST00000492728 PKHD1P08F94 4074 aa13.14□□□□□ -0.31
CHD1L-209ENST00000492728 SMCO3A2RU48 225 aa13.14□□□□□ -0.31
CHD1L-209ENST00000492728 SMIM9A6NGZ8 99 aa13.14□□□□□ -0.31
CHD1L-209ENST00000492728 MEOX2P50222 304 aa13.14□□□□□ -0.31
CHD1L-209ENST00000492728 FAM222AQ5U5X8 452 aa13.14□□□□□ -0.31
CHD1L-209ENST00000492728 SPATA31B1PQ5VZV4 182 aa13.14□□□□□ -0.31
CHD1L-209ENST00000492728 TRIQKQ629K1 86 aa13.14□□□□□ -0.31
CHD1L-209ENST00000492728 EBLN2Q6P2I7 272 aa13.14□□□□□ -0.31
CHD1L-209ENST00000492728 TMEM147Q9BVK8 224 aa13.14□□□□□ -0.31
CHD1L-209ENST00000492728 SLC25A39Q9BZJ4 359 aaPredicted RBP13.14□□□□□ -0.31
CHD1L-209ENST00000492728 RPRMQ9NS64 109 aa13.14□□□□□ -0.31
CHD1L-209ENST00000492728 NAP1L6A6NFF2 107 aa13.13□□□□□ -0.31
CHD1L-209ENST00000492728 PRM2P04554 102 aa13.13□□□□□ -0.31
CHD1L-209ENST00000492728 SPART-AS1P0CW21 52 aa13.13□□□□□ -0.31
CHD1L-209ENST00000492728 PRB4P10163 310 aaPredicted RBP13.13□□□□□ -0.31
CHD1L-209ENST00000492728 RRAS2P62070 204 aaPredicted RBP13.13□□□□□ -0.31
CHD1L-209ENST00000492728 TMEM14EPQ6UXP3 125 aa13.13□□□□□ -0.31
CHD1L-209ENST00000492728 SHANK2-AS3Q9BTD1 123 aa13.13□□□□□ -0.31
CHD1L-209ENST00000492728 RCL1Q9Y2P8 373 aaKnown RBP13.13□□□□□ -0.31
CHD1L-209ENST00000492728 DYNC1H1Q14204 4646 aaKnown RBP13.12□□□□□ -0.31
CHD1L-209ENST00000492728 DNAH11Q96DT5 4516 aa13.12□□□□□ -0.31
CHD1L-209ENST00000492728 LOC102723971A0A1B0GUV8 181 aa13.12□□□□□ -0.31
CHD1L-209ENST00000492728 TMEM189A5PLL7 270 aa13.12□□□□□ -0.31
CHD1L-209ENST00000492728 CRXO43186 299 aaPredicted RBP13.12□□□□□ -0.31
CHD1L-209ENST00000492728 METTL15P1P0C7V9 234 aa13.12□□□□□ -0.31
CHD1L-209ENST00000492728 CNN1P51911 297 aaKnown RBP13.12□□□□□ -0.31
CHD1L-209ENST00000492728 SAMD13Q5VXD3 122 aa13.12□□□□□ -0.31
CHD1L-209ENST00000492728 UHRF2Q96PU4 802 aa13.12□□□□□ -0.31
CHD1L-209ENST00000492728 NDUFAF3Q9BU61 184 aa13.12□□□□□ -0.31
CHD1L-209ENST00000492728 YTHDF2Q9Y5A9 579 aaKnown RBP13.12□□□□□ -0.31
CHD1L-209ENST00000492728 M0R2Z0 102 aa13.11□□□□□ -0.31
CHD1L-209ENST00000492728 IL5P05113 134 aa13.11□□□□□ -0.31
CHD1L-209ENST00000492728 LINC00869P0C866 280 aa13.11□□□□□ -0.31
CHD1L-209ENST00000492728 INPP1P49441 399 aa13.11□□□□□ -0.31
CHD1L-209ENST00000492728 PLP1P60201 277 aa13.11□□□□□ -0.31
CHD1L-209ENST00000492728 ARL16Q0P5N6 197 aa13.11□□□□□ -0.31
CHD1L-209ENST00000492728 OR11H7Q8NGC8 314 aa13.11□□□□□ -0.31
CHD1L-209ENST00000492728 SMIM8Q96KF7 97 aa13.11□□□□□ -0.31
CHD1L-209ENST00000492728 KRTAP17-1Q9BYP8 105 aa13.11□□□□□ -0.31
CHD1L-209ENST00000492728 GOLT1BQ9Y3E0 138 aa13.11□□□□□ -0.31
CHD1L-209ENST00000492728 SCGB1D2O95969 90 aa13.1□□□□□ -0.31
CHD1L-209ENST00000492728 IL7P13232 177 aa13.1□□□□□ -0.31
CHD1L-209ENST00000492728 FGL1Q08830 312 aa13.1□□□□□ -0.31
CHD1L-209ENST00000492728 SPINK13Q1W4C9 94 aa13.1□□□□□ -0.31
CHD1L-209ENST00000492728 IAH1Q2TAA2 248 aaPredicted RBP13.1□□□□□ -0.31
CHD1L-209ENST00000492728 C4orf46Q504U0 113 aa13.1□□□□□ -0.31
CHD1L-209ENST00000492728 PATE2Q6UY27 113 aa13.1□□□□□ -0.31
CHD1L-209ENST00000492728 POM121L12Q8N7R1 296 aa13.1□□□□□ -0.31
CHD1L-209ENST00000492728 ZBTB8BQ8NAP8 495 aaPredicted RBP13.1□□□□□ -0.31
CHD1L-209ENST00000492728 IGF2BP2-AS1Q96M15 143 aa13.1□□□□□ -0.31
CHD1L-209ENST00000492728 GPR82Q96P67 336 aa13.1□□□□□ -0.31
CHD1L-209ENST00000492728 C7orf50Q9BRJ6 194 aaKnown RBP13.1□□□□□ -0.31
CHD1L-209ENST00000492728 NIPSNAP3BQ9BS92 247 aa13.1□□□□□ -0.31
CHD1L-209ENST00000492728 HIGD1AQ9Y241 93 aa13.1□□□□□ -0.31
CHD1L-209ENST00000492728 IFNA21P01568 189 aa13.09□□□□□ -0.31
CHD1L-209ENST00000492728 HBE1P02100 147 aa13.09□□□□□ -0.31
CHD1L-209ENST00000492728 DLK1P80370 383 aa13.09□□□□□ -0.31
CHD1L-209ENST00000492728 SLC38A11Q08AI6 406 aa13.09□□□□□ -0.31
CHD1L-209ENST00000492728 BAP18Q8IXM2 172 aa13.09□□□□□ -0.31
CHD1L-209ENST00000492728 MITD1Q8WV92 249 aa13.09□□□□□ -0.31
CHD1L-209ENST00000492728 PKD1P98161 4303 aa13.09□□□□□ -0.31
CHD1L-209ENST00000492728 K7EPK0 472 aa13.08□□□□□ -0.32
CHD1L-209ENST00000492728 CCSO14618 274 aa13.08□□□□□ -0.32
CHD1L-209ENST00000492728 MRPS12O15235 138 aaKnown RBP13.08□□□□□ -0.32
CHD1L-209ENST00000492728 PLA2G10O15496 165 aa13.08□□□□□ -0.32
CHD1L-209ENST00000492728 HYPMO75409 117 aa13.08□□□□□ -0.32
CHD1L-209ENST00000492728 P0DMU3 169 aa13.08□□□□□ -0.32
CHD1L-209ENST00000492728 FAM231AP0DMU4 169 aa13.08□□□□□ -0.32
CHD1L-209ENST00000492728 FAM231CP0DMU5 169 aa13.08□□□□□ -0.32
CHD1L-209ENST00000492728 RRN3P1Q2M238 152 aa13.08□□□□□ -0.32
CHD1L-209ENST00000492728 A0A087X0K7 114 aa13.07□□□□□ -0.32
CHD1L-209ENST00000492728 A0A1B0GVY2 172 aa13.07□□□□□ -0.32
CHD1L-209ENST00000492728 ZNF705GA8MUZ8 300 aaPredicted RBP13.07□□□□□ -0.32
CHD1L-209ENST00000492728 TSC22D2O75157 780 aa13.07□□□□□ -0.32
CHD1L-209ENST00000492728 MBPP02686 304 aaPredicted RBP13.07□□□□□ -0.32
CHD1L-209ENST00000492728 OR5G3P0C626 314 aa13.07□□□□□ -0.32
CHD1L-209ENST00000492728 HTN3P15516 51 aa13.07□□□□□ -0.32
CHD1L-209ENST00000492728 RPL7P18124 248 aaKnown RBP13.07□□□□□ -0.32
CHD1L-209ENST00000492728 CXCL3P19876 107 aa13.07□□□□□ -0.32
CHD1L-209ENST00000492728 RAP2BP61225 183 aa13.07□□□□□ -0.32
CHD1L-209ENST00000492728 ZNF738Q8NE65 137 aa13.07□□□□□ -0.32
CHD1L-209ENST00000492728 C20orf85Q9H1P6 137 aa13.07□□□□□ -0.32
CHD1L-209ENST00000492728 TRAV12-2A0A075B6T6 113 aa13.06□□□□□ -0.32
CHD1L-209ENST00000492728 TEX48A0A1B0GUV7 120 aa13.06□□□□□ -0.32
CHD1L-209ENST00000492728 PLAC8L1A1L4L8 177 aa13.06□□□□□ -0.32
CHD1L-209ENST00000492728 C7orf66A4D0T2 115 aa13.06□□□□□ -0.32
CHD1L-209ENST00000492728 FNDC10F2Z333 226 aa13.06□□□□□ -0.32
CHD1L-209ENST00000492728 M0R2N4 97 aa13.06□□□□□ -0.32
CHD1L-209ENST00000492728 RTL8CO15255 209 aa13.06□□□□□ -0.32
CHD1L-209ENST00000492728 OXA1LQ15070 435 aa13.06□□□□□ -0.32
CHD1L-209ENST00000492728 ARL6Q9H0F7 186 aa13.06□□□□□ -0.32
CHD1L-209ENST00000492728 NPVFQ9HCQ7 196 aa13.06□□□□□ -0.32
CHD1L-209ENST00000492728 GSKIPQ9P0R6 139 aa13.06□□□□□ -0.32
CHD1L-209ENST00000492728 DUSP14O95147 198 aaKnown RBP13.05□□□□□ -0.32
CHD1L-209ENST00000492728 INSP01308 110 aa13.05□□□□□ -0.32
CHD1L-209ENST00000492728 SNRPCP09234 159 aaKnown RBP13.05□□□□□ -0.32
CHD1L-209ENST00000492728 TAS2R30P59541 319 aa13.05□□□□□ -0.32
CHD1L-209ENST00000492728 SELENOTP62341 195 aa13.05□□□□□ -0.32
CHD1L-209ENST00000492728 MORN5Q5VZ52 161 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms