RNA–Protein interactions for RNA: ENST00000492455.1

HMGB1P30-201, Transcript of high mobility group box 1 pseudogene 30, humanhuman

BASIC

Gene HMGB1P30, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P30-201ENST00000492455 PATE1Q8WXA2 126 aa0.71□□□□□ -2.3
HMGB1P30-201ENST00000492455 ZHX1-C8orf76Q96EF9 292 aa0.71□□□□□ -2.3
HMGB1P30-201ENST00000492455 BOLA2Q9H3K6 86 aa0.71□□□□□ -2.3
HMGB1P30-201ENST00000492455 GID8Q9NWU2 228 aa0.71□□□□□ -2.3
HMGB1P30-201ENST00000492455 ASB4Q9Y574 426 aa0.71□□□□□ -2.3
HMGB1P30-201ENST00000492455 TNRC6BQ9UPQ9 1833 aaKnown RBP0.71□□□□□ -2.3
HMGB1P30-201ENST00000492455 UNC13CQ8NB66 2214 aa0.7□□□□□ -2.3
HMGB1P30-201ENST00000492455 DOCK4Q8N1I0 1966 aa0.7□□□□□ -2.3
HMGB1P30-201ENST00000492455 TNRC6AQ8NDV7 1962 aaKnown RBP0.7□□□□□ -2.3
HMGB1P30-201ENST00000492455 MED12Q93074 2177 aa0.7□□□□□ -2.3
HMGB1P30-201ENST00000492455 MYH7BA7E2Y1 1941 aa0.7□□□□□ -2.3
HMGB1P30-201ENST00000492455 ZNF469Q96JG9 3925 aaPredicted RBP0.7□□□□□ -2.3
HMGB1P30-201ENST00000492455 TRAV10A0A0B4J240 114 aa0.7□□□□□ -2.3
HMGB1P30-201ENST00000492455 E5RI56 91 aa0.7□□□□□ -2.3
HMGB1P30-201ENST00000492455 CCL25O15444 150 aa0.7□□□□□ -2.3
HMGB1P30-201ENST00000492455 PIAS1O75925 651 aa0.7□□□□□ -2.3
HMGB1P30-201ENST00000492455 IGLV1-51P01701 117 aa0.7□□□□□ -2.3
HMGB1P30-201ENST00000492455 APOA2P02652 100 aa0.7□□□□□ -2.3
HMGB1P30-201ENST00000492455 CSN2P05814 226 aa0.7□□□□□ -2.3
HMGB1P30-201ENST00000492455 CXCL1P09341 107 aa0.7□□□□□ -2.3
HMGB1P30-201ENST00000492455 ZNF25P17030 456 aaPredicted RBP0.7□□□□□ -2.3
HMGB1P30-201ENST00000492455 S100A5P33763 92 aa0.7□□□□□ -2.3
HMGB1P30-201ENST00000492455 TMBIM6P55061 237 aa0.7□□□□□ -2.3
HMGB1P30-201ENST00000492455 C1orf134Q5TEV5 83 aa0.7□□□□□ -2.3
HMGB1P30-201ENST00000492455 KRTAP26-1Q6PEX3 210 aa0.7□□□□□ -2.3
HMGB1P30-201ENST00000492455 GRINAQ7Z429 371 aa0.7□□□□□ -2.3
HMGB1P30-201ENST00000492455 STX19Q8N4C7 294 aa0.7□□□□□ -2.3
HMGB1P30-201ENST00000492455 OR5D14Q8NGL3 314 aa0.7□□□□□ -2.3
HMGB1P30-201ENST00000492455 NEK7Q8TDX7 302 aa0.7□□□□□ -2.3
HMGB1P30-201ENST00000492455 TP53RKQ96S44 253 aa0.7□□□□□ -2.3
HMGB1P30-201ENST00000492455 TMEM70Q9BUB7 260 aa0.7□□□□□ -2.3
HMGB1P30-201ENST00000492455 TAF1LQ8IZX4 1826 aa0.7□□□□□ -2.3
HMGB1P30-201ENST00000492455 MYH10P35580 1976 aa0.7□□□□□ -2.3
HMGB1P30-201ENST00000492455 CEP192Q8TEP8 1941 aa0.7□□□□□ -2.3
HMGB1P30-201ENST00000492455 A0A087WSZ3 146 aa0.69□□□□□ -2.3
HMGB1P30-201ENST00000492455 TRBV6-4A0A1B0GX49 114 aa0.69□□□□□ -2.3
HMGB1P30-201ENST00000492455 TLCD2A6NGC4 264 aa0.69□□□□□ -2.3
HMGB1P30-201ENST00000492455 C17orf112F2Z3M2 114 aa0.69□□□□□ -2.3
HMGB1P30-201ENST00000492455 IFNA14P01570 189 aa0.69□□□□□ -2.3
HMGB1P30-201ENST00000492455 FREM3P0C091 2139 aa0.69□□□□□ -2.3
HMGB1P30-201ENST00000492455 OR10J4P0C629 311 aa0.69□□□□□ -2.3
HMGB1P30-201ENST00000492455 GLRXP35754 106 aa0.69□□□□□ -2.3
HMGB1P30-201ENST00000492455 ARPP19P56211 112 aa0.69□□□□□ -2.3
HMGB1P30-201ENST00000492455 TCTAP57738 103 aa0.69□□□□□ -2.3
HMGB1P30-201ENST00000492455 MSMO1Q15800 293 aa0.69□□□□□ -2.3
HMGB1P30-201ENST00000492455 LTC4SQ16873 150 aa0.69□□□□□ -2.3
HMGB1P30-201ENST00000492455 FAM74A1Q5RGS3 127 aa0.69□□□□□ -2.3
HMGB1P30-201ENST00000492455 C2orf82Q6UX34 121 aa0.69□□□□□ -2.3
HMGB1P30-201ENST00000492455 C4orf22Q6V702 233 aa0.69□□□□□ -2.3
HMGB1P30-201ENST00000492455 ZNF833PQ6ZTB9 187 aa0.69□□□□□ -2.3
HMGB1P30-201ENST00000492455 OR4K15Q8NH41 348 aa0.69□□□□□ -2.3
HMGB1P30-201ENST00000492455 PPTC7Q8NI37 304 aa0.69□□□□□ -2.3
HMGB1P30-201ENST00000492455 PLEKHB2Q96CS7 222 aa0.69□□□□□ -2.3
HMGB1P30-201ENST00000492455 ZNF714Q96N38 554 aa0.69□□□□□ -2.3
HMGB1P30-201ENST00000492455 CACYBPQ9HB71 228 aaKnown RBP0.69□□□□□ -2.3
HMGB1P30-201ENST00000492455 BIN3Q9NQY0 253 aa0.69□□□□□ -2.3
HMGB1P30-201ENST00000492455 TAS2R7Q9NYW3 318 aa0.69□□□□□ -2.3
HMGB1P30-201ENST00000492455 MUC16Q8WXI7 14507 aa0.69□□□□□ -2.3
HMGB1P30-201ENST00000492455 SNRNP200O75643 2136 aaKnown RBP0.68□□□□□ -2.3
HMGB1P30-201ENST00000492455 HEATR1Q9H583 2144 aaKnown RBP0.68□□□□□ -2.3
HMGB1P30-201ENST00000492455 CEP164Q9UPV0 1460 aa0.68□□□□□ -2.3
HMGB1P30-201ENST00000492455 TRAV5A0A0B4J249 113 aa0.68□□□□□ -2.3
HMGB1P30-201ENST00000492455 IGHV1-58A0A0C4DH39 117 aa0.68□□□□□ -2.3
HMGB1P30-201ENST00000492455 ODAMA1E959 279 aa0.68□□□□□ -2.3
HMGB1P30-201ENST00000492455 M0R233 179 aa0.68□□□□□ -2.3
HMGB1P30-201ENST00000492455 NUPR1O60356 82 aa0.68□□□□□ -2.3
HMGB1P30-201ENST00000492455 CD2P06729 351 aa0.68□□□□□ -2.3
HMGB1P30-201ENST00000492455 RAB5CP51148 216 aa0.68□□□□□ -2.3
HMGB1P30-201ENST00000492455 CDK6Q00534 326 aa0.68□□□□□ -2.3
HMGB1P30-201ENST00000492455 DEFB115Q30KQ5 88 aa0.68□□□□□ -2.3
HMGB1P30-201ENST00000492455 C1orf140Q5VVS0 124 aa0.68□□□□□ -2.3
HMGB1P30-201ENST00000492455 TRIQKQ629K1 86 aa0.68□□□□□ -2.3
HMGB1P30-201ENST00000492455 TNS3Q68CZ2 1445 aa0.68□□□□□ -2.3
HMGB1P30-201ENST00000492455 UHRF1BP1Q6BDS2 1440 aa0.68□□□□□ -2.3
HMGB1P30-201ENST00000492455 C3orf33Q6P1S2 294 aa0.68□□□□□ -2.3
HMGB1P30-201ENST00000492455 PHF5AQ7RTV0 110 aaKnown RBP0.68□□□□□ -2.3
HMGB1P30-201ENST00000492455 AHNAK2Q8IVF2 5795 aa0.68□□□□□ -2.3
HMGB1P30-201ENST00000492455 OR5D16Q8NGK9 328 aa0.68□□□□□ -2.3
HMGB1P30-201ENST00000492455 Q8TAT8 98 aa0.68□□□□□ -2.3
HMGB1P30-201ENST00000492455 POP5Q969H6 163 aaKnown RBP0.68□□□□□ -2.3
HMGB1P30-201ENST00000492455 BORCS5Q969J3 196 aa0.68□□□□□ -2.3
HMGB1P30-201ENST00000492455 RAB37Q96AX2 223 aa0.68□□□□□ -2.3
HMGB1P30-201ENST00000492455 CHCHD1Q96BP2 118 aaKnown RBP0.68□□□□□ -2.3
HMGB1P30-201ENST00000492455 CARD19Q96LW7 228 aa0.68□□□□□ -2.3
HMGB1P30-201ENST00000492455 LINC00052Q96N35 136 aa0.68□□□□□ -2.3
HMGB1P30-201ENST00000492455 RTL8AQ9BWD3 113 aa0.68□□□□□ -2.3
HMGB1P30-201ENST00000492455 ORMDL1Q9P0S3 153 aa0.68□□□□□ -2.3
HMGB1P30-201ENST00000492455 RNF11Q9Y3C5 154 aa0.68□□□□□ -2.3
HMGB1P30-201ENST00000492455 ARHGEF11O15085 1522 aa0.68□□□□□ -2.3
HMGB1P30-201ENST00000492455 KIAA1549Q9HCM3 1950 aa0.67□□□□□ -2.3
HMGB1P30-201ENST00000492455 PPP5D1E7EU14 171 aa0.67□□□□□ -2.3
HMGB1P30-201ENST00000492455 RER1O15258 196 aa0.67□□□□□ -2.3
HMGB1P30-201ENST00000492455 ERC2-IT1O76042 136 aa0.67□□□□□ -2.3
HMGB1P30-201ENST00000492455 IDO1P14902 403 aa0.67□□□□□ -2.3
HMGB1P30-201ENST00000492455 SERPINB1P30740 379 aa0.67□□□□□ -2.3
HMGB1P30-201ENST00000492455 HBBP68871 147 aa0.67□□□□□ -2.3
HMGB1P30-201ENST00000492455 RTL8BQ17RB0 113 aa0.67□□□□□ -2.3
HMGB1P30-201ENST00000492455 SPRNQ5BIV9 151 aa0.67□□□□□ -2.3
HMGB1P30-201ENST00000492455 FKBP1CQ5VVH2 108 aa0.67□□□□□ -2.3
HMGB1P30-201ENST00000492455 IFT20Q8IY31 132 aa0.67□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 101.4 ms