RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 OR2T8A6NH00 312 aa6.76□□□□□ -1.33
HDAC3-212ENST00000492407 CORTO00230 105 aa6.76□□□□□ -1.33
HDAC3-212ENST00000492407 S1PR2O95136 353 aa6.76□□□□□ -1.33
HDAC3-212ENST00000492407 LY6G6CO95867 125 aa6.76□□□□□ -1.33
HDAC3-212ENST00000492407 S100A7P31151 101 aa6.76□□□□□ -1.33
HDAC3-212ENST00000492407 ADMP35318 185 aa6.76□□□□□ -1.33
HDAC3-212ENST00000492407 TAS2R46P59540 309 aa6.76□□□□□ -1.33
HDAC3-212ENST00000492407 FXYD4P59646 89 aa6.76□□□□□ -1.33
HDAC3-212ENST00000492407 SEC61GP60059 68 aa6.76□□□□□ -1.33
HDAC3-212ENST00000492407 RPL32P62910 135 aaKnown RBP6.76□□□□□ -1.33
HDAC3-212ENST00000492407 MXD1Q05195 221 aa6.76□□□□□ -1.33
HDAC3-212ENST00000492407 ODF3L2Q3SX64 289 aa6.76□□□□□ -1.33
HDAC3-212ENST00000492407 PRR27Q6MZM9 219 aa6.76□□□□□ -1.33
HDAC3-212ENST00000492407 RNASEKQ6P5S7 137 aaKnown RBP6.76□□□□□ -1.33
HDAC3-212ENST00000492407 H2BFWTQ7Z2G1 175 aa6.76□□□□□ -1.33
HDAC3-212ENST00000492407 NIT1Q86X76 327 aa6.76□□□□□ -1.33
HDAC3-212ENST00000492407 OR51H1Q8NH63 302 aa6.76□□□□□ -1.33
HDAC3-212ENST00000492407 PINX1Q96BK5 328 aaKnown RBP6.76□□□□□ -1.33
HDAC3-212ENST00000492407 MOB3AQ96BX8 217 aa6.76□□□□□ -1.33
HDAC3-212ENST00000492407 YIPF6Q96EC8 236 aa6.76□□□□□ -1.33
HDAC3-212ENST00000492407 MRAP2Q96G30 205 aa6.76□□□□□ -1.33
HDAC3-212ENST00000492407 OR10C1Q96KK4 312 aa6.76□□□□□ -1.33
HDAC3-212ENST00000492407 GPHA2Q96T91 129 aa6.76□□□□□ -1.33
HDAC3-212ENST00000492407 SEC11CQ9BY50 192 aa6.76□□□□□ -1.33
HDAC3-212ENST00000492407 OR51B2Q9Y5P1 312 aa6.76□□□□□ -1.33
HDAC3-212ENST00000492407 K7EIM0 57 aa6.75□□□□□ -1.33
HDAC3-212ENST00000492407 GPR31O00270 319 aa6.75□□□□□ -1.33
HDAC3-212ENST00000492407 ST8SIA3O43173 380 aa6.75□□□□□ -1.33
HDAC3-212ENST00000492407 RLN1P04808 185 aa6.75□□□□□ -1.33
HDAC3-212ENST00000492407 CTSGP08311 255 aa6.75□□□□□ -1.33
HDAC3-212ENST00000492407 OR5AC1P0C628 307 aa6.75□□□□□ -1.33
HDAC3-212ENST00000492407 PTHLHP12272 177 aa6.75□□□□□ -1.33
HDAC3-212ENST00000492407 LPAR6P43657 344 aa6.75□□□□□ -1.33
HDAC3-212ENST00000492407 PIGPP57054 158 aa6.75□□□□□ -1.33
HDAC3-212ENST00000492407 TCTAP57738 103 aa6.75□□□□□ -1.33
HDAC3-212ENST00000492407 OR5I1Q13606 314 aa6.75□□□□□ -1.33
HDAC3-212ENST00000492407 NEDD8Q15843 81 aa6.75□□□□□ -1.33
HDAC3-212ENST00000492407 LGALS9CQ6DKI2 356 aa6.75□□□□□ -1.33
HDAC3-212ENST00000492407 TP53RKQ96S44 253 aa6.75□□□□□ -1.33
HDAC3-212ENST00000492407 C20orf144Q9BQM9 153 aa6.75□□□□□ -1.33
HDAC3-212ENST00000492407 MARVELD1Q9BSK0 173 aa6.75□□□□□ -1.33
HDAC3-212ENST00000492407 TMEM14BQ9NUH8 114 aa6.75□□□□□ -1.33
HDAC3-212ENST00000492407 EHFQ9NZC4 300 aa6.75□□□□□ -1.33
HDAC3-212ENST00000492407 TRAV2A0A0B4J234 112 aa6.74□□□□□ -1.33
HDAC3-212ENST00000492407 IGHV3-35A0A0C4DH35 117 aa6.74□□□□□ -1.33
HDAC3-212ENST00000492407 IGHV7-4-1A0A0J9YVY3 117 aa6.74□□□□□ -1.33
HDAC3-212ENST00000492407 F8W735 103 aaPredicted RBP6.74□□□□□ -1.33
HDAC3-212ENST00000492407 CHEK1O14757 476 aa6.74□□□□□ -1.33
HDAC3-212ENST00000492407 KRASP01116 189 aa6.74□□□□□ -1.33
HDAC3-212ENST00000492407 CTSDP07339 412 aaPredicted RBP6.74□□□□□ -1.33
HDAC3-212ENST00000492407 PPT1P50897 306 aa6.74□□□□□ -1.33
HDAC3-212ENST00000492407 MFAP2P55001 183 aa6.74□□□□□ -1.33
HDAC3-212ENST00000492407 PAFAH1B2P68402 229 aa6.74□□□□□ -1.33
HDAC3-212ENST00000492407 BAXQ07812 192 aa6.74□□□□□ -1.33
HDAC3-212ENST00000492407 DEFB135Q30KP9 77 aa6.74□□□□□ -1.33
HDAC3-212ENST00000492407 LGALSLQ3ZCW2 172 aaPredicted RBP6.74□□□□□ -1.33
HDAC3-212ENST00000492407 Q56UQ5 140 aa6.74□□□□□ -1.33
HDAC3-212ENST00000492407 UBE2NLQ5JXB2 153 aa6.74□□□□□ -1.33
HDAC3-212ENST00000492407 TMUB2Q71RG4 321 aa6.74□□□□□ -1.33
HDAC3-212ENST00000492407 ZNF664Q8N3J9 261 aa6.74□□□□□ -1.33
HDAC3-212ENST00000492407 ZNF114Q8NC26 417 aa6.74□□□□□ -1.33
HDAC3-212ENST00000492407 TMEM116Q8NCL8 245 aa6.74□□□□□ -1.33
HDAC3-212ENST00000492407 OR5H2Q8NGV7 314 aa6.74□□□□□ -1.33
HDAC3-212ENST00000492407 FCAMRQ8WWV6 532 aa6.74□□□□□ -1.33
HDAC3-212ENST00000492407 PRO1933Q9H354 126 aa6.74□□□□□ -1.33
HDAC3-212ENST00000492407 C11orf68Q9H3H3 251 aaKnown RBP6.74□□□□□ -1.33
HDAC3-212ENST00000492407 TMEM231Q9H6L2 316 aa6.74□□□□□ -1.33
HDAC3-212ENST00000492407 TRAV14DV4A0A0A6YYC5 116 aa6.73□□□□□ -1.33
HDAC3-212ENST00000492407 C15orf61A6NNL5 157 aa6.73□□□□□ -1.33
HDAC3-212ENST00000492407 I3L2K1 104 aa6.73□□□□□ -1.33
HDAC3-212ENST00000492407 ZNF561-AS1K7EIQ3 104 aa6.73□□□□□ -1.33
HDAC3-212ENST00000492407 PRSS3P35030 304 aa6.73□□□□□ -1.33
HDAC3-212ENST00000492407 UCP3P55916 312 aa6.73□□□□□ -1.33
HDAC3-212ENST00000492407 OPCMLQ14982 345 aa6.73□□□□□ -1.33
HDAC3-212ENST00000492407 TMEM69Q5SWH9 247 aa6.73□□□□□ -1.33
HDAC3-212ENST00000492407 C1orf194Q5T5A4 169 aa6.73□□□□□ -1.33
HDAC3-212ENST00000492407 FAM78BQ5VT40 261 aa6.73□□□□□ -1.33
HDAC3-212ENST00000492407 FAM90A2PQ658T7 463 aa6.73□□□□□ -1.33
HDAC3-212ENST00000492407 ZNF738Q8NE65 137 aa6.73□□□□□ -1.33
HDAC3-212ENST00000492407 OR1S1Q8NH92 325 aa6.73□□□□□ -1.33
HDAC3-212ENST00000492407 HIST1H2BAQ96A08 127 aa6.73□□□□□ -1.33
HDAC3-212ENST00000492407 GINS3Q9BRX5 216 aa6.73□□□□□ -1.33
HDAC3-212ENST00000492407 RHPN1-AS1Q9BWJ2 59 aa6.73□□□□□ -1.33
HDAC3-212ENST00000492407 MAP1LC3CQ9BXW4 147 aa6.73□□□□□ -1.33
HDAC3-212ENST00000492407 SELENOKQ9Y6D0 94 aa6.73□□□□□ -1.33
HDAC3-212ENST00000492407 INS-IGF2F8WCM5 200 aa6.72□□□□□ -1.33
HDAC3-212ENST00000492407 PHOX2AO14813 284 aa6.72□□□□□ -1.33
HDAC3-212ENST00000492407 SMIM17P0DL12 118 aa6.72□□□□□ -1.33
HDAC3-212ENST00000492407 G6PCP35575 357 aa6.72□□□□□ -1.33
HDAC3-212ENST00000492407 NPBWR1P48145 328 aa6.72□□□□□ -1.33
HDAC3-212ENST00000492407 TAS2R20P59543 309 aa6.72□□□□□ -1.33
HDAC3-212ENST00000492407 HSPE1P61604 102 aaKnown RBP6.72□□□□□ -1.33
HDAC3-212ENST00000492407 PRCDQ00LT1 54 aa6.72□□□□□ -1.33
HDAC3-212ENST00000492407 EWSR1Q01844 656 aaKnown RBP eCLIP6.72□□□□□ -1.33
HDAC3-212ENST00000492407 GAGE5Q13069 117 aa6.72□□□□□ -1.33
HDAC3-212ENST00000492407 GAGE6Q13070 117 aa6.72□□□□□ -1.33
HDAC3-212ENST00000492407 PDZD11Q5EBL8 140 aa6.72□□□□□ -1.33
HDAC3-212ENST00000492407 OR10D4PQ8NGN7 298 aa6.72□□□□□ -1.33
HDAC3-212ENST00000492407 OR52E5Q8NH55 327 aa6.72□□□□□ -1.33
HDAC3-212ENST00000492407 OR4A16Q8NH70 328 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms