RNA–Protein interactions for RNA: ENST00000492357.1

USP54-214, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 3

Gene USP54, Length 353 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-214ENST00000492357 PEA15Q15121 130 aa7.4□□□□□ -1.22
USP54-214ENST00000492357 ZNF506Q5JVG8 444 aa7.4□□□□□ -1.22
USP54-214ENST00000492357 KLHL30-AS1Q8NEE0 82 aa7.4□□□□□ -1.22
USP54-214ENST00000492357 OR1N2Q8NGR9 330 aa7.4□□□□□ -1.22
USP54-214ENST00000492357 PAXXQ9BUH6 204 aa7.4□□□□□ -1.22
USP54-214ENST00000492357 SLC25A2Q9BXI2 301 aa7.4□□□□□ -1.22
USP54-214ENST00000492357 VAX2Q9UIW0 290 aa7.4□□□□□ -1.22
USP54-214ENST00000492357 C2CD3Q4AC94 2353 aa7.39□□□□□ -1.23
USP54-214ENST00000492357 IGHV4OR15-8A0A075B7B6 117 aa7.39□□□□□ -1.23
USP54-214ENST00000492357 A0A087WW49 117 aa7.39□□□□□ -1.23
USP54-214ENST00000492357 M0QZ24 198 aa7.39□□□□□ -1.23
USP54-214ENST00000492357 MRPS12O15235 138 aaKnown RBP7.39□□□□□ -1.23
USP54-214ENST00000492357 PDE6DO43924 150 aa7.39□□□□□ -1.23
USP54-214ENST00000492357 TRBV12-3P01733 135 aa7.39□□□□□ -1.23
USP54-214ENST00000492357 CD28P10747 220 aa7.39□□□□□ -1.23
USP54-214ENST00000492357 SMCPP49901 116 aaPredicted RBP7.39□□□□□ -1.23
USP54-214ENST00000492357 UBE2L3P68036 154 aaKnown RBP7.39□□□□□ -1.23
USP54-214ENST00000492357 MEF2BQ02080 365 aaPredicted RBP7.39□□□□□ -1.23
USP54-214ENST00000492357 C16orf54Q6UWD8 224 aa7.39□□□□□ -1.23
USP54-214ENST00000492357 LCNL1Q6ZST4 164 aa7.39□□□□□ -1.23
USP54-214ENST00000492357 SSX7Q7RTT5 188 aa7.39□□□□□ -1.23
USP54-214ENST00000492357 OR8I2Q8N0Y5 310 aa7.39□□□□□ -1.23
USP54-214ENST00000492357 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.39□□□□□ -1.23
USP54-214ENST00000492357 OR11H1Q8NG94 326 aa7.39□□□□□ -1.23
USP54-214ENST00000492357 RPUSD4Q96CM3 377 aaKnown RBP7.39□□□□□ -1.23
USP54-214ENST00000492357 UHRF2Q96PU4 802 aa7.39□□□□□ -1.23
USP54-214ENST00000492357 DOK5Q9P104 306 aa7.39□□□□□ -1.23
USP54-214ENST00000492357 SMPXQ9UHP9 88 aa7.39□□□□□ -1.23
USP54-214ENST00000492357 TRAV2A0A0B4J234 112 aa7.38□□□□□ -1.23
USP54-214ENST00000492357 LOC102723971A0A1B0GUV8 181 aa7.38□□□□□ -1.23
USP54-214ENST00000492357 FBLL1A6NHQ2 334 aaKnown RBP7.38□□□□□ -1.23
USP54-214ENST00000492357 KRBOX1C9JBD0 128 aa7.38□□□□□ -1.23
USP54-214ENST00000492357 F6UZH7 168 aa7.38□□□□□ -1.23
USP54-214ENST00000492357 NBEAP1P0C6P0 100 aa7.38□□□□□ -1.23
USP54-214ENST00000492357 IGLC2P0DOY2 106 aa7.38□□□□□ -1.23
USP54-214ENST00000492357 PSG9Q00887 426 aa7.38□□□□□ -1.23
USP54-214ENST00000492357 KHDC1LQ5JSQ8 128 aa7.38□□□□□ -1.23
USP54-214ENST00000492357 SPATA31B1PQ5VZV4 182 aa7.38□□□□□ -1.23
USP54-214ENST00000492357 COMMD7Q86VX2 200 aa7.38□□□□□ -1.23
USP54-214ENST00000492357 FXYD5Q96DB9 178 aa7.38□□□□□ -1.23
USP54-214ENST00000492357 ZNF503Q96F45 646 aa7.38□□□□□ -1.23
USP54-214ENST00000492357 CITED1Q99966 193 aa7.38□□□□□ -1.23
USP54-214ENST00000492357 CITED2Q99967 270 aaPredicted RBP7.38□□□□□ -1.23
USP54-214ENST00000492357 SLC50A1Q9BRV3 221 aa7.38□□□□□ -1.23
USP54-214ENST00000492357 PRELID1Q9Y255 219 aa7.38□□□□□ -1.23
USP54-214ENST00000492357 TRBV19A0A075B6N1 114 aa7.37□□□□□ -1.23
USP54-214ENST00000492357 SERTM2A0A1B0GWG4 89 aa7.37□□□□□ -1.23
USP54-214ENST00000492357 CCL24O00175 119 aa7.37□□□□□ -1.23
USP54-214ENST00000492357 FAM74A3Q4VXF1 159 aa7.37□□□□□ -1.23
USP54-214ENST00000492357 AWAT1Q58HT5 328 aa7.37□□□□□ -1.23
USP54-214ENST00000492357 GLMPQ8WWB7 406 aa7.37□□□□□ -1.23
USP54-214ENST00000492357 TMEM158Q8WZ71 300 aa7.37□□□□□ -1.23
USP54-214ENST00000492357 MRPL53Q96EL3 112 aaKnown RBP7.37□□□□□ -1.23
USP54-214ENST00000492357 C20orf24Q9BUV8 137 aa7.37□□□□□ -1.23
USP54-214ENST00000492357 SCRT1Q9BWW7 348 aa7.37□□□□□ -1.23
USP54-214ENST00000492357 EIF5A2Q9GZV4 153 aaKnown RBP7.37□□□□□ -1.23
USP54-214ENST00000492357 GNG13Q9P2W3 67 aa7.37□□□□□ -1.23
USP54-214ENST00000492357 NF1P21359 2839 aa7.37□□□□□ -1.23
USP54-214ENST00000492357 TRAV25A0A0B4J276 109 aa7.36□□□□□ -1.23
USP54-214ENST00000492357 ZNF320A2RRD8 509 aa7.36□□□□□ -1.23
USP54-214ENST00000492357 TMEM213A2RRL7 107 aa7.36□□□□□ -1.23
USP54-214ENST00000492357 FAM74A7A6NL05 159 aa7.36□□□□□ -1.23
USP54-214ENST00000492357 ADARB2-AS1A8MUL3 147 aa7.36□□□□□ -1.23
USP54-214ENST00000492357 S100A9P06702 114 aaKnown RBP7.36□□□□□ -1.23
USP54-214ENST00000492357 ATF4P18848 351 aaPredicted RBP7.36□□□□□ -1.23
USP54-214ENST00000492357 FGF8P55075 233 aaPredicted RBP7.36□□□□□ -1.23
USP54-214ENST00000492357 CCL20P78556 96 aa7.36□□□□□ -1.23
USP54-214ENST00000492357 TOR2AQ5JU69 321 aa7.36□□□□□ -1.23
USP54-214ENST00000492357 MORN5Q5VZ52 161 aa7.36□□□□□ -1.23
USP54-214ENST00000492357 UNQ9165/PRO28630Q6UXU0 137 aa7.36□□□□□ -1.23
USP54-214ENST00000492357 SIGLEC15Q6ZMC9 328 aa7.36□□□□□ -1.23
USP54-214ENST00000492357 CCDC28AQ8IWP9 274 aa7.36□□□□□ -1.23
USP54-214ENST00000492357 LINC00528Q8N1L1 170 aa7.36□□□□□ -1.23
USP54-214ENST00000492357 C5orf17Q8NAS9 161 aa7.36□□□□□ -1.23
USP54-214ENST00000492357 OR9G4Q8NGQ1 327 aa7.36□□□□□ -1.23
USP54-214ENST00000492357 OR2K2Q8NGT1 345 aa7.36□□□□□ -1.23
USP54-214ENST00000492357 RXFP4Q8TDU9 374 aa7.36□□□□□ -1.23
USP54-214ENST00000492357 HIST1H2BAQ96A08 127 aa7.36□□□□□ -1.23
USP54-214ENST00000492357 C11orf52Q96A22 123 aa7.36□□□□□ -1.23
USP54-214ENST00000492357 RAX2Q96IS3 184 aa7.36□□□□□ -1.23
USP54-214ENST00000492357 OR5B12Q96R08 314 aa7.36□□□□□ -1.23
USP54-214ENST00000492357 RHPN1-AS1Q9BWJ2 59 aa7.36□□□□□ -1.23
USP54-214ENST00000492357 SLC35B3Q9H1N7 401 aa7.36□□□□□ -1.23
USP54-214ENST00000492357 AAMDCQ9H7C9 122 aa7.36□□□□□ -1.23
USP54-214ENST00000492357 OTORQ9NRC9 128 aa7.36□□□□□ -1.23
USP54-214ENST00000492357 TRAV5A0A0B4J249 113 aa7.35□□□□□ -1.23
USP54-214ENST00000492357 C2orf70A6NJV1 201 aa7.35□□□□□ -1.23
USP54-214ENST00000492357 C11orf94C9JXX5 98 aa7.35□□□□□ -1.23
USP54-214ENST00000492357 CHEK1O14757 476 aa7.35□□□□□ -1.23
USP54-214ENST00000492357 HMGB3O15347 200 aaKnown RBP7.35□□□□□ -1.23
USP54-214ENST00000492357 CBLN1P23435 193 aa7.35□□□□□ -1.23
USP54-214ENST00000492357 SYNJ2BPP57105 145 aa7.35□□□□□ -1.23
USP54-214ENST00000492357 ICAM4Q14773 271 aa7.35□□□□□ -1.23
USP54-214ENST00000492357 C8orf86Q6ZUL3 223 aa7.35□□□□□ -1.23
USP54-214ENST00000492357 IQCF2Q8IXL9 164 aa7.35□□□□□ -1.23
USP54-214ENST00000492357 PCNPQ8WW12 178 aaKnown RBP7.35□□□□□ -1.23
USP54-214ENST00000492357 ZNF747Q9BV97 191 aa7.35□□□□□ -1.23
USP54-214ENST00000492357 MLXQ9UH92 298 aa7.35□□□□□ -1.23
USP54-214ENST00000492357 IGHV3-35A0A0C4DH35 117 aa7.34□□□□□ -1.23
USP54-214ENST00000492357 ISLRO14498 428 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms