RNA–Protein interactions for RNA: ENST00000491831.5

AFF4-209, Transcript of AF4/FMR2 family member 4, humanhuman

TSL 1 (best)

Gene AFF4, Length 1,667 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF4-209ENST00000491831 DYNLRB2Q8TF09 96 aa12.8□□□□□ -0.36
AFF4-209ENST00000491831 SFT2D1Q8WV19 159 aa12.8□□□□□ -0.36
AFF4-209ENST00000491831 CITED4Q96RK1 184 aa12.8□□□□□ -0.36
AFF4-209ENST00000491831 MRPL27Q9P0M9 148 aaKnown RBP12.8□□□□□ -0.36
AFF4-209ENST00000491831 RABAC1Q9UI14 185 aa12.8□□□□□ -0.36
AFF4-209ENST00000491831 U3KQE9 123 aa12.8□□□□□ -0.36
AFF4-209ENST00000491831 DNAH3Q8TD57 4116 aa12.8□□□□□ -0.36
AFF4-209ENST00000491831 SELENOTP62341 195 aa12.8□□□□□ -0.36
AFF4-209ENST00000491831 DEFB114Q30KQ6 69 aa12.8□□□□□ -0.36
AFF4-209ENST00000491831 C9orf66Q5T8R8 295 aa12.8□□□□□ -0.36
AFF4-209ENST00000491831 SPATA31B1PQ5VZV4 182 aa12.8□□□□□ -0.36
AFF4-209ENST00000491831 FAM122CQ6P4D5 195 aa12.8□□□□□ -0.36
AFF4-209ENST00000491831 TMEM61Q8N0U2 210 aa12.8□□□□□ -0.36
AFF4-209ENST00000491831 MARC2Q969Z3 335 aa12.8□□□□□ -0.36
AFF4-209ENST00000491831 ACTR3CQ9C0K3 210 aaPredicted RBP12.8□□□□□ -0.36
AFF4-209ENST00000491831 A0A1B0GV50 99 aa12.79□□□□□ -0.36
AFF4-209ENST00000491831 HYPMO75409 117 aa12.79□□□□□ -0.36
AFF4-209ENST00000491831 IGLV1-51P01701 117 aa12.79□□□□□ -0.36
AFF4-209ENST00000491831 KRTAP10-11P60412 298 aa12.79□□□□□ -0.36
AFF4-209ENST00000491831 SAMD5Q5TGI4 173 aa12.79□□□□□ -0.36
AFF4-209ENST00000491831 SSX7Q7RTT5 188 aa12.79□□□□□ -0.36
AFF4-209ENST00000491831 MBD3L1Q8WWY6 194 aa12.79□□□□□ -0.36
AFF4-209ENST00000491831 SLC25A22Q9H936 323 aa12.79□□□□□ -0.36
AFF4-209ENST00000491831 TRAV5A0A0B4J249 113 aa12.78□□□□□ -0.36
AFF4-209ENST00000491831 SNRPCP09234 159 aaKnown RBP12.78□□□□□ -0.36
AFF4-209ENST00000491831 PLP1P60201 277 aa12.78□□□□□ -0.36
AFF4-209ENST00000491831 LCN15Q6UWW0 184 aa12.78□□□□□ -0.36
AFF4-209ENST00000491831 CTXND1A0A1B0GTU2 59 aa12.77□□□□□ -0.36
AFF4-209ENST00000491831 BUB3O43684 328 aa12.77□□□□□ -0.36
AFF4-209ENST00000491831 COX7A2P2O60397 106 aa12.77□□□□□ -0.36
AFF4-209ENST00000491831 PRB2P02812 416 aaPredicted RBP12.77□□□□□ -0.36
AFF4-209ENST00000491831 CDC34P49427 236 aaPredicted RBP12.77□□□□□ -0.36
AFF4-209ENST00000491831 RAB24Q969Q5 203 aa12.77□□□□□ -0.36
AFF4-209ENST00000491831 SLC25A39Q9BZJ4 359 aaPredicted RBP12.77□□□□□ -0.36
AFF4-209ENST00000491831 SIGLEC8Q9NYZ4 499 aa12.77□□□□□ -0.36
AFF4-209ENST00000491831 HIGD1AQ9Y241 93 aa12.77□□□□□ -0.36
AFF4-209ENST00000491831 TRAV1-1A0A0B4J248 108 aa12.77□□□□□ -0.37
AFF4-209ENST00000491831 A0A1W2PPV4 95 aa12.77□□□□□ -0.37
AFF4-209ENST00000491831 H3BRN7 92 aa12.77□□□□□ -0.37
AFF4-209ENST00000491831 HMGB3O15347 200 aaKnown RBP12.77□□□□□ -0.37
AFF4-209ENST00000491831 HBE1P02100 147 aa12.77□□□□□ -0.37
AFF4-209ENST00000491831 CCL20P78556 96 aa12.77□□□□□ -0.37
AFF4-209ENST00000491831 GBGT1Q8N5D6 347 aa12.77□□□□□ -0.37
AFF4-209ENST00000491831 GLMPQ8WWB7 406 aa12.77□□□□□ -0.37
AFF4-209ENST00000491831 MCRIP2Q9BUT9 160 aaKnown RBP12.77□□□□□ -0.37
AFF4-209ENST00000491831 RAB19A4D1S5 217 aa12.76□□□□□ -0.37
AFF4-209ENST00000491831 MAP1LC3B2A6NCE7 125 aa12.76□□□□□ -0.37
AFF4-209ENST00000491831 ZNF98A6NK75 572 aa12.76□□□□□ -0.37
AFF4-209ENST00000491831 FGF8P55075 233 aaPredicted RBP12.76□□□□□ -0.37
AFF4-209ENST00000491831 C16orf54Q6UWD8 224 aa12.76□□□□□ -0.37
AFF4-209ENST00000491831 TCF24Q7RTU0 167 aa12.76□□□□□ -0.37
AFF4-209ENST00000491831 LINC00305Q7Z4B0 112 aa12.76□□□□□ -0.37
AFF4-209ENST00000491831 EIF4E3Q8N5X7 224 aaKnown RBP12.76□□□□□ -0.37
AFF4-209ENST00000491831 SHANK2-AS3Q9BTD1 123 aa12.76□□□□□ -0.37
AFF4-209ENST00000491831 MAP1LC3BQ9GZQ8 125 aa12.76□□□□□ -0.37
AFF4-209ENST00000491831 SEPSECSQ9HD40 501 aaKnown RBP12.76□□□□□ -0.37
AFF4-209ENST00000491831 TFPI2P48307 235 aa12.75□□□□□ -0.37
AFF4-209ENST00000491831 C10orf113Q5VZT2 155 aa12.75□□□□□ -0.37
AFF4-209ENST00000491831 FAM90A2PQ658T7 463 aa12.75□□□□□ -0.37
AFF4-209ENST00000491831 MIR17HGQ75NE6 70 aa12.75□□□□□ -0.37
AFF4-209ENST00000491831 DNAJC4Q9NNZ3 241 aa12.75□□□□□ -0.37
AFF4-209ENST00000491831 WIPF1O43516 503 aa12.74□□□□□ -0.37
AFF4-209ENST00000491831 RHOBP62745 196 aa12.74□□□□□ -0.37
AFF4-209ENST00000491831 FAM78BQ5VT40 261 aa12.74□□□□□ -0.37
AFF4-209ENST00000491831 C17orf77Q96MU5 243 aa12.74□□□□□ -0.37
AFF4-209ENST00000491831 PRR25Q96S07 402 aa12.74□□□□□ -0.37
AFF4-209ENST00000491831 ZNF785A8K8V0 405 aa12.73□□□□□ -0.37
AFF4-209ENST00000491831 RPL11P62913 178 aaKnown RBP12.73□□□□□ -0.37
AFF4-209ENST00000491831 GUCA2BQ16661 112 aa12.73□□□□□ -0.37
AFF4-209ENST00000491831 WFDC3Q8IUB2 231 aa12.73□□□□□ -0.37
AFF4-209ENST00000491831 OR1L4Q8NGR5 311 aa12.73□□□□□ -0.37
AFF4-209ENST00000491831 GATAD1Q8WUU5 269 aa12.73□□□□□ -0.37
AFF4-209ENST00000491831 SMAD5-AS1Q9Y6J3 95 aa12.73□□□□□ -0.37
AFF4-209ENST00000491831 H3BTX0 84 aa12.73□□□□□ -0.37
AFF4-209ENST00000491831 PRB4P10163 310 aaPredicted RBP12.73□□□□□ -0.37
AFF4-209ENST00000491831 SRSF3P84103 164 aaKnown RBP12.73□□□□□ -0.37
AFF4-209ENST00000491831 BEAN1Q3B7T3 259 aa12.73□□□□□ -0.37
AFF4-209ENST00000491831 OR8I2Q8N0Y5 310 aa12.73□□□□□ -0.37
AFF4-209ENST00000491831 FAM24BQ8N5W8 94 aa12.73□□□□□ -0.37
AFF4-209ENST00000491831 FAM210AQ96ND0 272 aa12.73□□□□□ -0.37
AFF4-209ENST00000491831 PFDN5Q99471 154 aa12.73□□□□□ -0.37
AFF4-209ENST00000491831 TECRQ9NZ01 308 aaKnown RBP12.73□□□□□ -0.37
AFF4-209ENST00000491831 INSL3P51460 131 aa12.72□□□□□ -0.37
AFF4-209ENST00000491831 UQCC3Q6UW78 93 aa12.72□□□□□ -0.37
AFF4-209ENST00000491831 SIGLEC15Q6ZMC9 328 aa12.72□□□□□ -0.37
AFF4-209ENST00000491831 STXBP6Q8NFX7 210 aa12.72□□□□□ -0.37
AFF4-209ENST00000491831 NARS2Q96I59 477 aaKnown RBP12.72□□□□□ -0.37
AFF4-209ENST00000491831 FUT9Q9Y231 359 aa12.72□□□□□ -0.37
AFF4-209ENST00000491831 ELOA3CA0A087WX78 387 aaPredicted RBP12.71□□□□□ -0.37
AFF4-209ENST00000491831 A0A1W2PS18 150 aa12.71□□□□□ -0.37
AFF4-209ENST00000491831 STAG3L2P0CL84 134 aa12.71□□□□□ -0.37
AFF4-209ENST00000491831 STAG3L3P0CL85 134 aa12.71□□□□□ -0.37
AFF4-209ENST00000491831 GUK1Q16774 197 aa12.71□□□□□ -0.37
AFF4-209ENST00000491831 RBPMS2Q6ZRY4 209 aaKnown RBP12.71□□□□□ -0.37
AFF4-209ENST00000491831 SLC25A2Q9BXI2 301 aa12.71□□□□□ -0.37
AFF4-209ENST00000491831 EIF5A2Q9GZV4 153 aaKnown RBP12.71□□□□□ -0.37
AFF4-209ENST00000491831 WFDC10AQ9H1F0 79 aa12.71□□□□□ -0.37
AFF4-209ENST00000491831 MS4A6AQ9H2W1 248 aa12.71□□□□□ -0.37
AFF4-209ENST00000491831 TMPRSS5Q9H3S3 457 aa12.71□□□□□ -0.37
AFF4-209ENST00000491831 TMEM231Q9H6L2 316 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms