RNA–Protein interactions for RNA: ENST00000491552.1

MSH5-SAPCD1-206, Transcript of MSH5-SAPCD1 readthrough (NMD candidate), humanhuman

TSL 3

Gene MSH5-SAPCD1, Length 706 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-SAPCD1-206ENST00000491552 Q6ZRG5 221 aa12.02□□□□□ -0.49
MSH5-SAPCD1-206ENST00000491552 KIR2DL5AQ8N109 375 aa12.02□□□□□ -0.49
MSH5-SAPCD1-206ENST00000491552 KIR2DL5BQ8NHK3 375 aa12.02□□□□□ -0.49
MSH5-SAPCD1-206ENST00000491552 CHAC2Q8WUX2 184 aa12.02□□□□□ -0.49
MSH5-SAPCD1-206ENST00000491552 ASB13Q8WXK3 278 aa12.02□□□□□ -0.49
MSH5-SAPCD1-206ENST00000491552 RNF24Q9Y225 148 aa12.02□□□□□ -0.49
MSH5-SAPCD1-206ENST00000491552 ELOA3CA0A087WX78 387 aaPredicted RBP12.01□□□□□ -0.49
MSH5-SAPCD1-206ENST00000491552 SOCS3O14543 225 aa12.01□□□□□ -0.49
MSH5-SAPCD1-206ENST00000491552 RPL7P18124 248 aaKnown RBP12.01□□□□□ -0.49
MSH5-SAPCD1-206ENST00000491552 MEOX2P50222 304 aa12.01□□□□□ -0.49
MSH5-SAPCD1-206ENST00000491552 B2MP61769 119 aa12.01□□□□□ -0.49
MSH5-SAPCD1-206ENST00000491552 SAMD13Q5VXD3 122 aa12.01□□□□□ -0.49
MSH5-SAPCD1-206ENST00000491552 STHQ8IWL8 128 aa12.01□□□□□ -0.49
MSH5-SAPCD1-206ENST00000491552 OR1L4Q8NGR5 311 aa12.01□□□□□ -0.49
MSH5-SAPCD1-206ENST00000491552 ATP5SQ99766 215 aa12.01□□□□□ -0.49
MSH5-SAPCD1-206ENST00000491552 NPCDR1Q9BY65 106 aa12.01□□□□□ -0.49
MSH5-SAPCD1-206ENST00000491552 SLC39A9Q9NUM3 307 aa12.01□□□□□ -0.49
MSH5-SAPCD1-206ENST00000491552 KNCNA6PVL3 124 aa12□□□□□ -0.49
MSH5-SAPCD1-206ENST00000491552 UBE2CO00762 179 aa12□□□□□ -0.49
MSH5-SAPCD1-206ENST00000491552 ID1P41134 155 aa12□□□□□ -0.49
MSH5-SAPCD1-206ENST00000491552 PSMB3P49720 205 aa12□□□□□ -0.49
MSH5-SAPCD1-206ENST00000491552 FGL1Q08830 312 aa12□□□□□ -0.49
MSH5-SAPCD1-206ENST00000491552 C10orf113Q5VZT2 155 aa12□□□□□ -0.49
MSH5-SAPCD1-206ENST00000491552 LINC00305Q7Z4B0 112 aa12□□□□□ -0.49
MSH5-SAPCD1-206ENST00000491552 TMEM37Q8WXS4 190 aa12□□□□□ -0.49
MSH5-SAPCD1-206ENST00000491552 WWC2-AS2Q96NR7 200 aa12□□□□□ -0.49
MSH5-SAPCD1-206ENST00000491552 RSG1Q9BU20 258 aa12□□□□□ -0.49
MSH5-SAPCD1-206ENST00000491552 PXMP4Q9Y6I8 212 aa12□□□□□ -0.49
MSH5-SAPCD1-206ENST00000491552 HUWE1Q7Z6Z7 4374 aaKnown RBP11.99□□□□□ -0.49
MSH5-SAPCD1-206ENST00000491552 ATF4P18848 351 aaPredicted RBP11.99□□□□□ -0.49
MSH5-SAPCD1-206ENST00000491552 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.99□□□□□ -0.49
MSH5-SAPCD1-206ENST00000491552 C16orf92Q96LL3 132 aa11.99□□□□□ -0.49
MSH5-SAPCD1-206ENST00000491552 PFDN5Q99471 154 aa11.99□□□□□ -0.49
MSH5-SAPCD1-206ENST00000491552 WDR61Q9GZS3 305 aaKnown RBP11.99□□□□□ -0.49
MSH5-SAPCD1-206ENST00000491552 CSTL1Q9H114 145 aa11.99□□□□□ -0.49
MSH5-SAPCD1-206ENST00000491552 DNAJC4Q9NNZ3 241 aa11.99□□□□□ -0.49
MSH5-SAPCD1-206ENST00000491552 ISLRO14498 428 aa11.98□□□□□ -0.49
MSH5-SAPCD1-206ENST00000491552 ACTL10Q5JWF8 245 aa11.98□□□□□ -0.49
MSH5-SAPCD1-206ENST00000491552 Q6ZWC4 215 aa11.98□□□□□ -0.49
MSH5-SAPCD1-206ENST00000491552 TRPT1Q86TN4 253 aaKnown RBP11.98□□□□□ -0.49
MSH5-SAPCD1-206ENST00000491552 C17orf77Q96MU5 243 aa11.98□□□□□ -0.49
MSH5-SAPCD1-206ENST00000491552 LINC00052Q96N35 136 aa11.98□□□□□ -0.49
MSH5-SAPCD1-206ENST00000491552 SMIM3Q9BZL3 60 aa11.98□□□□□ -0.49
MSH5-SAPCD1-206ENST00000491552 KCNIP2Q9NS61 270 aa11.98□□□□□ -0.49
MSH5-SAPCD1-206ENST00000491552 A0A087X0K7 114 aa11.97□□□□□ -0.49
MSH5-SAPCD1-206ENST00000491552 DEFB135Q30KP9 77 aa11.97□□□□□ -0.49
MSH5-SAPCD1-206ENST00000491552 MORN5Q5VZ52 161 aa11.97□□□□□ -0.49
MSH5-SAPCD1-206ENST00000491552 ZNF709Q8N972 641 aa11.97□□□□□ -0.49
MSH5-SAPCD1-206ENST00000491552 OVOL2Q9BRP0 275 aa11.97□□□□□ -0.49
MSH5-SAPCD1-206ENST00000491552 TP53TG1Q9Y2A0 90 aa11.97□□□□□ -0.49
MSH5-SAPCD1-206ENST00000491552 C17orf112F2Z3M2 114 aa11.96□□□□□ -0.49
MSH5-SAPCD1-206ENST00000491552 MRPS12O15235 138 aaKnown RBP11.96□□□□□ -0.49
MSH5-SAPCD1-206ENST00000491552 IFNA5P01569 189 aa11.96□□□□□ -0.49
MSH5-SAPCD1-206ENST00000491552 Q5BKY6 102 aa11.96□□□□□ -0.49
MSH5-SAPCD1-206ENST00000491552 BPIFA4PQ86YQ2 179 aa11.96□□□□□ -0.49
MSH5-SAPCD1-206ENST00000491552 GATAD1Q8WUU5 269 aa11.96□□□□□ -0.49
MSH5-SAPCD1-206ENST00000491552 SPRY2O43597 315 aa11.95□□□□□ -0.5
MSH5-SAPCD1-206ENST00000491552 CA1P00915 261 aaPredicted RBP11.95□□□□□ -0.5
MSH5-SAPCD1-206ENST00000491552 SPP1P10451 314 aa11.95□□□□□ -0.5
MSH5-SAPCD1-206ENST00000491552 HLA-DRB4P13762 266 aa11.95□□□□□ -0.5
MSH5-SAPCD1-206ENST00000491552 MORN3Q6PF18 240 aaPredicted RBP11.95□□□□□ -0.5
MSH5-SAPCD1-206ENST00000491552 OR2T35Q8NGX2 323 aa11.95□□□□□ -0.5
MSH5-SAPCD1-206ENST00000491552 SCGB1C1Q8TD33 95 aa11.95□□□□□ -0.5
MSH5-SAPCD1-206ENST00000491552 RNF183Q96D59 192 aa11.95□□□□□ -0.5
MSH5-SAPCD1-206ENST00000491552 AQP10Q96PS8 301 aa11.95□□□□□ -0.5
MSH5-SAPCD1-206ENST00000491552 PARD6GQ9BYG4 376 aaPredicted RBP11.95□□□□□ -0.5
MSH5-SAPCD1-206ENST00000491552 HLA-DRB4X5D2U9 266 aa11.95□□□□□ -0.5
MSH5-SAPCD1-206ENST00000491552 H3BMM0 161 aa11.94□□□□□ -0.5
MSH5-SAPCD1-206ENST00000491552 CXCL2P19875 107 aa11.94□□□□□ -0.5
MSH5-SAPCD1-206ENST00000491552 FOXI2Q6ZQN5 318 aa11.94□□□□□ -0.5
MSH5-SAPCD1-206ENST00000491552 C20orf173Q96LM9 149 aa11.94□□□□□ -0.5
MSH5-SAPCD1-206ENST00000491552 SAV1Q9H4B6 383 aaPredicted RBP11.94□□□□□ -0.5
MSH5-SAPCD1-206ENST00000491552 WFDC1Q9HC57 220 aa11.94□□□□□ -0.5
MSH5-SAPCD1-206ENST00000491552 RPRMQ9NS64 109 aa11.94□□□□□ -0.5
MSH5-SAPCD1-206ENST00000491552 FXYD6-FXYD2A0A087WZ82 144 aa11.93□□□□□ -0.5
MSH5-SAPCD1-206ENST00000491552 TRAV8-2A0A0B4J237 113 aa11.93□□□□□ -0.5
MSH5-SAPCD1-206ENST00000491552 TRAV5A0A0B4J249 113 aa11.93□□□□□ -0.5
MSH5-SAPCD1-206ENST00000491552 DEFB1P60022 68 aa11.93□□□□□ -0.5
MSH5-SAPCD1-206ENST00000491552 TMEM41BQ5BJD5 291 aa11.93□□□□□ -0.5
MSH5-SAPCD1-206ENST00000491552 GCSAMLQ5JQS6 135 aa11.93□□□□□ -0.5
MSH5-SAPCD1-206ENST00000491552 GDF5OSQ5U4N7 250 aa11.93□□□□□ -0.5
MSH5-SAPCD1-206ENST00000491552 LRRC20Q8TCA0 184 aa11.93□□□□□ -0.5
MSH5-SAPCD1-206ENST00000491552 EDA2RQ9HAV5 297 aa11.93□□□□□ -0.5
MSH5-SAPCD1-206ENST00000491552 C4BPBP20851 252 aa11.92□□□□□ -0.5
MSH5-SAPCD1-206ENST00000491552 FAM78BQ5VT40 261 aa11.92□□□□□ -0.5
MSH5-SAPCD1-206ENST00000491552 SPATA31B1PQ5VZV4 182 aa11.92□□□□□ -0.5
MSH5-SAPCD1-206ENST00000491552 IGFL4Q6B9Z1 124 aa11.92□□□□□ -0.5
MSH5-SAPCD1-206ENST00000491552 EBLN2Q6P2I7 272 aa11.92□□□□□ -0.5
MSH5-SAPCD1-206ENST00000491552 LCN15Q6UWW0 184 aa11.92□□□□□ -0.5
MSH5-SAPCD1-206ENST00000491552 RNF182Q8N6D2 247 aa11.92□□□□□ -0.5
MSH5-SAPCD1-206ENST00000491552 INO80EQ8NBZ0 244 aaPredicted RBP11.92□□□□□ -0.5
MSH5-SAPCD1-206ENST00000491552 A0A0J9YX75 114 aa11.91□□□□□ -0.5
MSH5-SAPCD1-206ENST00000491552 F6UB75 175 aa11.91□□□□□ -0.5
MSH5-SAPCD1-206ENST00000491552 SNRPCP09234 159 aaKnown RBP11.91□□□□□ -0.5
MSH5-SAPCD1-206ENST00000491552 GIG44P09565 113 aaPredicted RBP11.91□□□□□ -0.5
MSH5-SAPCD1-206ENST00000491552 IGLC2P0DOY2 106 aa11.91□□□□□ -0.5
MSH5-SAPCD1-206ENST00000491552 NUTF2P61970 127 aaKnown RBP11.91□□□□□ -0.5
MSH5-SAPCD1-206ENST00000491552 ZNF266Q14584 549 aa11.91□□□□□ -0.5
MSH5-SAPCD1-206ENST00000491552 FFAR4Q5NUL3 377 aa11.91□□□□□ -0.5
MSH5-SAPCD1-206ENST00000491552 ZNF738Q8NE65 137 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms