RNA–Protein interactions for RNA: ENST00000491233.1

COL6A3-211, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 3

Gene COL6A3, Length 652 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-211ENST00000491233 NDUFB6O95139 128 aa9.71□□□□□ -0.86
COL6A3-211ENST00000491233 HTN3P15516 51 aa9.71□□□□□ -0.86
COL6A3-211ENST00000491233 S100A7P31151 101 aa9.71□□□□□ -0.86
COL6A3-211ENST00000491233 INPP1P49441 399 aa9.71□□□□□ -0.86
COL6A3-211ENST00000491233 ID3Q02535 119 aa9.71□□□□□ -0.86
COL6A3-211ENST00000491233 FGL1Q08830 312 aa9.71□□□□□ -0.86
COL6A3-211ENST00000491233 RRN3P1Q2M238 152 aa9.71□□□□□ -0.86
COL6A3-211ENST00000491233 TRIQKQ629K1 86 aa9.71□□□□□ -0.86
COL6A3-211ENST00000491233 IGFL4Q6B9Z1 124 aa9.71□□□□□ -0.86
COL6A3-211ENST00000491233 CYP2G1PQ6ZSU1 146 aa9.71□□□□□ -0.86
COL6A3-211ENST00000491233 LINC00336Q6ZUF6 198 aa9.71□□□□□ -0.86
COL6A3-211ENST00000491233 TMEM144Q7Z5S9 345 aa9.71□□□□□ -0.86
COL6A3-211ENST00000491233 UBE2DNLQ8IWF7 75 aa9.71□□□□□ -0.86
COL6A3-211ENST00000491233 RNF182Q8N6D2 247 aa9.71□□□□□ -0.86
COL6A3-211ENST00000491233 IGF2BP2-AS1Q96M15 143 aa9.71□□□□□ -0.86
COL6A3-211ENST00000491233 TMEM208Q9BTX3 173 aa9.71□□□□□ -0.86
COL6A3-211ENST00000491233 KRTAP17-1Q9BYP8 105 aa9.71□□□□□ -0.86
COL6A3-211ENST00000491233 PSENENQ9NZ42 101 aa9.71□□□□□ -0.86
COL6A3-211ENST00000491233 PLA2G2EQ9NZK7 142 aa9.71□□□□□ -0.86
COL6A3-211ENST00000491233 TRAV8-2A0A0B4J237 113 aa9.7□□□□□ -0.86
COL6A3-211ENST00000491233 M0R2N4 97 aa9.7□□□□□ -0.86
COL6A3-211ENST00000491233 CCNKO75909 580 aa9.7□□□□□ -0.86
COL6A3-211ENST00000491233 IL5P05113 134 aa9.7□□□□□ -0.86
COL6A3-211ENST00000491233 CNN1P51911 297 aaKnown RBP9.7□□□□□ -0.86
COL6A3-211ENST00000491233 RAP2BP61225 183 aa9.7□□□□□ -0.86
COL6A3-211ENST00000491233 BAK1Q16611 211 aa9.7□□□□□ -0.86
COL6A3-211ENST00000491233 SPINK13Q1W4C9 94 aa9.7□□□□□ -0.86
COL6A3-211ENST00000491233 OR11H7Q8NGC8 314 aa9.7□□□□□ -0.86
COL6A3-211ENST00000491233 SHANK2-AS3Q9BTD1 123 aa9.7□□□□□ -0.86
COL6A3-211ENST00000491233 SLC25A39Q9BZJ4 359 aaPredicted RBP9.7□□□□□ -0.86
COL6A3-211ENST00000491233 FLVCR2Q9UPI3 526 aa9.7□□□□□ -0.86
COL6A3-211ENST00000491233 HIGD1AQ9Y241 93 aa9.7□□□□□ -0.86
COL6A3-211ENST00000491233 NAP1L6A6NFF2 107 aa9.69□□□□□ -0.86
COL6A3-211ENST00000491233 PMS2P5A8MQ11 134 aa9.69□□□□□ -0.86
COL6A3-211ENST00000491233 NACAE9PAV3 2078 aa9.69□□□□□ -0.86
COL6A3-211ENST00000491233 M0R2Z0 102 aa9.69□□□□□ -0.86
COL6A3-211ENST00000491233 DUSP14O95147 198 aaKnown RBP9.69□□□□□ -0.86
COL6A3-211ENST00000491233 INSP01308 110 aa9.69□□□□□ -0.86
COL6A3-211ENST00000491233 IFNA21P01568 189 aa9.69□□□□□ -0.86
COL6A3-211ENST00000491233 LINC00869P0C866 280 aa9.69□□□□□ -0.86
COL6A3-211ENST00000491233 RRAS2P62070 204 aaPredicted RBP9.69□□□□□ -0.86
COL6A3-211ENST00000491233 OXA1LQ15070 435 aa9.69□□□□□ -0.86
COL6A3-211ENST00000491233 ZNF738Q8NE65 137 aa9.69□□□□□ -0.86
COL6A3-211ENST00000491233 FAM210BQ96KR6 192 aa9.69□□□□□ -0.86
COL6A3-211ENST00000491233 UHRF2Q96PU4 802 aa9.69□□□□□ -0.86
COL6A3-211ENST00000491233 DNAH17Q9UFH2 4485 aa9.68□□□□□ -0.86
COL6A3-211ENST00000491233 LINC00854A0A1B0GVQ3 168 aa9.68□□□□□ -0.86
COL6A3-211ENST00000491233 A0A1B0GVY2 172 aa9.68□□□□□ -0.86
COL6A3-211ENST00000491233 CRXO43186 299 aaPredicted RBP9.68□□□□□ -0.86
COL6A3-211ENST00000491233 SCGB1D2O95969 90 aa9.68□□□□□ -0.86
COL6A3-211ENST00000491233 OR5G3P0C626 314 aa9.68□□□□□ -0.86
COL6A3-211ENST00000491233 OR4E1P0C645 316 aa9.68□□□□□ -0.86
COL6A3-211ENST00000491233 METTL15P1P0C7V9 234 aa9.68□□□□□ -0.86
COL6A3-211ENST00000491233 RPL7P18124 248 aaKnown RBP9.68□□□□□ -0.86
COL6A3-211ENST00000491233 ANXA7P20073 488 aaKnown RBP9.68□□□□□ -0.86
COL6A3-211ENST00000491233 DAD1P61803 113 aa9.68□□□□□ -0.86
COL6A3-211ENST00000491233 DLK1P80370 383 aa9.68□□□□□ -0.86
COL6A3-211ENST00000491233 BAP18Q8IXM2 172 aa9.68□□□□□ -0.86
COL6A3-211ENST00000491233 SMIM8Q96KF7 97 aa9.68□□□□□ -0.86
COL6A3-211ENST00000491233 FAT2Q9NYQ8 4349 aa9.68□□□□□ -0.86
COL6A3-211ENST00000491233 IGLV2-18A0A075B6J9 118 aa9.67□□□□□ -0.86
COL6A3-211ENST00000491233 ZNF705GA8MUZ8 300 aaPredicted RBP9.67□□□□□ -0.86
COL6A3-211ENST00000491233 BOLA2-SMG1P6H3BVE0 249 aa9.67□□□□□ -0.86
COL6A3-211ENST00000491233 RTL8CO15255 209 aa9.67□□□□□ -0.86
COL6A3-211ENST00000491233 HYPMO75409 117 aa9.67□□□□□ -0.86
COL6A3-211ENST00000491233 BTCP35070 178 aa9.67□□□□□ -0.86
COL6A3-211ENST00000491233 PLP1P60201 277 aa9.67□□□□□ -0.86
COL6A3-211ENST00000491233 SELENOTP62341 195 aa9.67□□□□□ -0.86
COL6A3-211ENST00000491233 C4orf46Q504U0 113 aa9.67□□□□□ -0.86
COL6A3-211ENST00000491233 TMEM88Q6PEY1 159 aa9.67□□□□□ -0.86
COL6A3-211ENST00000491233 TMEM14EPQ6UXP3 125 aa9.67□□□□□ -0.86
COL6A3-211ENST00000491233 KIAA1109Q2LD37 5005 aa9.67□□□□□ -0.86
COL6A3-211ENST00000491233 DNAH2Q9P225 4427 aa9.66□□□□□ -0.86
COL6A3-211ENST00000491233 A0A087X0K7 114 aa9.66□□□□□ -0.86
COL6A3-211ENST00000491233 PRSS29PA6NIE9 313 aa9.66□□□□□ -0.86
COL6A3-211ENST00000491233 ZNF701M0R085 212 aaPredicted RBP9.66□□□□□ -0.86
COL6A3-211ENST00000491233 PRM2P04554 102 aa9.66□□□□□ -0.86
COL6A3-211ENST00000491233 HIST1H1AQ02539 215 aaPredicted RBP9.66□□□□□ -0.86
COL6A3-211ENST00000491233 SLC38A11Q08AI6 406 aa9.66□□□□□ -0.86
COL6A3-211ENST00000491233 IAH1Q2TAA2 248 aaPredicted RBP9.66□□□□□ -0.86
COL6A3-211ENST00000491233 LGALS9BQ3B8N2 356 aa9.66□□□□□ -0.86
COL6A3-211ENST00000491233 SDHCQ99643 169 aaPredicted RBP9.66□□□□□ -0.86
COL6A3-211ENST00000491233 ARL6Q9H0F7 186 aa9.66□□□□□ -0.86
COL6A3-211ENST00000491233 MGAT4CQ9UBM8 478 aa9.66□□□□□ -0.86
COL6A3-211ENST00000491233 RCL1Q9Y2P8 373 aaKnown RBP9.66□□□□□ -0.86
COL6A3-211ENST00000491233 TRAV12-2A0A075B6T6 113 aa9.65□□□□□ -0.86
COL6A3-211ENST00000491233 FNDC10F2Z333 226 aa9.65□□□□□ -0.86
COL6A3-211ENST00000491233 K7EPK0 472 aa9.65□□□□□ -0.86
COL6A3-211ENST00000491233 TSC22D2O75157 780 aa9.65□□□□□ -0.86
COL6A3-211ENST00000491233 PRB4P10163 310 aaPredicted RBP9.65□□□□□ -0.86
COL6A3-211ENST00000491233 CXCL3P19876 107 aa9.65□□□□□ -0.86
COL6A3-211ENST00000491233 ZBTB8BQ8NAP8 495 aaPredicted RBP9.65□□□□□ -0.86
COL6A3-211ENST00000491233 OR10P1Q8NGE3 313 aa9.65□□□□□ -0.86
COL6A3-211ENST00000491233 OR8A1Q8NGG7 326 aa9.65□□□□□ -0.86
COL6A3-211ENST00000491233 ARV1Q9H2C2 271 aa9.65□□□□□ -0.86
COL6A3-211ENST00000491233 NPVFQ9HCQ7 196 aa9.65□□□□□ -0.86
COL6A3-211ENST00000491233 CENPXA8MT69 81 aa9.64□□□□□ -0.87
COL6A3-211ENST00000491233 MRPS12O15235 138 aaKnown RBP9.64□□□□□ -0.87
COL6A3-211ENST00000491233 RHOBP62745 196 aa9.64□□□□□ -0.87
COL6A3-211ENST00000491233 TEPPQ6URK8 271 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms