RNA–Protein interactions for RNA: ENST00000491052.5

LIMK1-207, Transcript of LIM domain kinase 1, humanhuman

TSL 4

Gene LIMK1, Length 587 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-207ENST00000491052 ATP5SQ99766 215 aa9.5□□□□□ -0.89
LIMK1-207ENST00000491052 SPATA25Q9BR10 227 aa9.5□□□□□ -0.89
LIMK1-207ENST00000491052 RSG1Q9BU20 258 aa9.5□□□□□ -0.89
LIMK1-207ENST00000491052 NPCDR1Q9BY65 106 aa9.5□□□□□ -0.89
LIMK1-207ENST00000491052 RETNQ9HD89 108 aa9.5□□□□□ -0.89
LIMK1-207ENST00000491052 SLC39A9Q9NUM3 307 aa9.5□□□□□ -0.89
LIMK1-207ENST00000491052 PXMP4Q9Y6I8 212 aa9.5□□□□□ -0.89
LIMK1-207ENST00000491052 RPL7P18124 248 aaKnown RBP9.49□□□□□ -0.89
LIMK1-207ENST00000491052 PRR20EP86478 221 aa9.49□□□□□ -0.89
LIMK1-207ENST00000491052 PRR20CP86479 221 aa9.49□□□□□ -0.89
LIMK1-207ENST00000491052 PRR20DP86480 221 aa9.49□□□□□ -0.89
LIMK1-207ENST00000491052 PRR20BP86481 221 aa9.49□□□□□ -0.89
LIMK1-207ENST00000491052 PRR20AP86496 221 aa9.49□□□□□ -0.89
LIMK1-207ENST00000491052 LINC00305Q7Z4B0 112 aa9.49□□□□□ -0.89
LIMK1-207ENST00000491052 ZNF709Q8N972 641 aa9.49□□□□□ -0.89
LIMK1-207ENST00000491052 OR1L4Q8NGR5 311 aa9.49□□□□□ -0.89
LIMK1-207ENST00000491052 OR2T35Q8NGX2 323 aa9.49□□□□□ -0.89
LIMK1-207ENST00000491052 PFDN5Q99471 154 aa9.49□□□□□ -0.89
LIMK1-207ENST00000491052 WDR61Q9GZS3 305 aaKnown RBP9.49□□□□□ -0.89
LIMK1-207ENST00000491052 RNF24Q9Y225 148 aa9.49□□□□□ -0.89
LIMK1-207ENST00000491052 NBEAL2Q6ZNJ1 2754 aa9.48□□□□□ -0.89
LIMK1-207ENST00000491052 ELOA3CA0A087WX78 387 aaPredicted RBP9.48□□□□□ -0.89
LIMK1-207ENST00000491052 FXYD6-FXYD2A0A087WZ82 144 aa9.48□□□□□ -0.89
LIMK1-207ENST00000491052 KNCNA6PVL3 124 aa9.48□□□□□ -0.89
LIMK1-207ENST00000491052 IFNA5P01569 189 aa9.48□□□□□ -0.89
LIMK1-207ENST00000491052 ID1P41134 155 aa9.48□□□□□ -0.89
LIMK1-207ENST00000491052 PSMB3P49720 205 aa9.48□□□□□ -0.89
LIMK1-207ENST00000491052 MEOX2P50222 304 aa9.48□□□□□ -0.89
LIMK1-207ENST00000491052 Q5BKY6 102 aa9.48□□□□□ -0.89
LIMK1-207ENST00000491052 SAMD13Q5VXD3 122 aa9.48□□□□□ -0.89
LIMK1-207ENST00000491052 STHQ8IWL8 128 aa9.48□□□□□ -0.89
LIMK1-207ENST00000491052 SCGB1C1Q8TD33 95 aa9.48□□□□□ -0.89
LIMK1-207ENST00000491052 CHAC2Q8WUX2 184 aa9.48□□□□□ -0.89
LIMK1-207ENST00000491052 TMEM37Q8WXS4 190 aa9.48□□□□□ -0.89
LIMK1-207ENST00000491052 C16orf92Q96LL3 132 aa9.48□□□□□ -0.89
LIMK1-207ENST00000491052 LINC00052Q96N35 136 aa9.48□□□□□ -0.89
LIMK1-207ENST00000491052 DNAJC4Q9NNZ3 241 aa9.48□□□□□ -0.89
LIMK1-207ENST00000491052 KCNIP2Q9NS61 270 aa9.48□□□□□ -0.89
LIMK1-207ENST00000491052 SOCS3O14543 225 aa9.47□□□□□ -0.89
LIMK1-207ENST00000491052 ACTL10Q5JWF8 245 aa9.47□□□□□ -0.89
LIMK1-207ENST00000491052 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.47□□□□□ -0.89
LIMK1-207ENST00000491052 SEPSECSQ9HD40 501 aaKnown RBP9.47□□□□□ -0.89
LIMK1-207ENST00000491052 KIR2DL5BA0A0G2JN68 375 aa9.46□□□□□ -0.9
LIMK1-207ENST00000491052 KIR2DL5BA0A0G2JPC4 375 aa9.46□□□□□ -0.9
LIMK1-207ENST00000491052 C17orf112F2Z3M2 114 aa9.46□□□□□ -0.9
LIMK1-207ENST00000491052 ISLRO14498 428 aa9.46□□□□□ -0.9
LIMK1-207ENST00000491052 DEFB135Q30KP9 77 aa9.46□□□□□ -0.9
LIMK1-207ENST00000491052 MORN5Q5VZ52 161 aa9.46□□□□□ -0.9
LIMK1-207ENST00000491052 BPIFA4PQ86YQ2 179 aa9.46□□□□□ -0.9
LIMK1-207ENST00000491052 KIR2DL5AQ8N109 375 aa9.46□□□□□ -0.9
LIMK1-207ENST00000491052 INO80EQ8NBZ0 244 aaPredicted RBP9.46□□□□□ -0.9
LIMK1-207ENST00000491052 KIR2DL5BQ8NHK3 375 aa9.46□□□□□ -0.9
LIMK1-207ENST00000491052 AQP10Q96PS8 301 aa9.46□□□□□ -0.9
LIMK1-207ENST00000491052 WFDC1Q9HC57 220 aa9.46□□□□□ -0.9
LIMK1-207ENST00000491052 UBE2CO00762 179 aa9.45□□□□□ -0.9
LIMK1-207ENST00000491052 GCSAMLQ5JQS6 135 aa9.45□□□□□ -0.9
LIMK1-207ENST00000491052 LRRC20Q8TCA0 184 aa9.45□□□□□ -0.9
LIMK1-207ENST00000491052 GATAD1Q8WUU5 269 aa9.45□□□□□ -0.9
LIMK1-207ENST00000491052 CSTL1Q9H114 145 aa9.45□□□□□ -0.9
LIMK1-207ENST00000491052 A0A087X0K7 114 aa9.44□□□□□ -0.9
LIMK1-207ENST00000491052 TRAV5A0A0B4J249 113 aa9.44□□□□□ -0.9
LIMK1-207ENST00000491052 MRPS12O15235 138 aaKnown RBP9.44□□□□□ -0.9
LIMK1-207ENST00000491052 CA1P00915 261 aaPredicted RBP9.44□□□□□ -0.9
LIMK1-207ENST00000491052 SNRPCP09234 159 aaKnown RBP9.44□□□□□ -0.9
LIMK1-207ENST00000491052 DEFB1P60022 68 aa9.44□□□□□ -0.9
LIMK1-207ENST00000491052 FFAR4Q5NUL3 377 aa9.44□□□□□ -0.9
LIMK1-207ENST00000491052 FAM78BQ5VT40 261 aa9.44□□□□□ -0.9
LIMK1-207ENST00000491052 TRPT1Q86TN4 253 aaKnown RBP9.44□□□□□ -0.9
LIMK1-207ENST00000491052 C17orf77Q96MU5 243 aa9.44□□□□□ -0.9
LIMK1-207ENST00000491052 HUWE1Q7Z6Z7 4374 aaKnown RBP9.44□□□□□ -0.9
LIMK1-207ENST00000491052 G3V3Q6 166 aa9.43□□□□□ -0.9
LIMK1-207ENST00000491052 SMLR1H3BR10 107 aa9.43□□□□□ -0.9
LIMK1-207ENST00000491052 ZNF266Q14584 549 aa9.43□□□□□ -0.9
LIMK1-207ENST00000491052 IGFL4Q6B9Z1 124 aa9.43□□□□□ -0.9
LIMK1-207ENST00000491052 LCN15Q6UWW0 184 aa9.43□□□□□ -0.9
LIMK1-207ENST00000491052 Q6ZWC4 215 aa9.43□□□□□ -0.9
LIMK1-207ENST00000491052 RNF182Q8N6D2 247 aa9.43□□□□□ -0.9
LIMK1-207ENST00000491052 C20orf173Q96LM9 149 aa9.43□□□□□ -0.9
LIMK1-207ENST00000491052 WWC2-AS2Q96NR7 200 aa9.43□□□□□ -0.9
LIMK1-207ENST00000491052 PARD6GQ9BYG4 376 aaPredicted RBP9.43□□□□□ -0.9
LIMK1-207ENST00000491052 RPRMQ9NS64 109 aa9.43□□□□□ -0.9
LIMK1-207ENST00000491052 TNFSF18Q9UNG2 199 aa9.43□□□□□ -0.9
LIMK1-207ENST00000491052 TRAV8-2A0A0B4J237 113 aa9.42□□□□□ -0.9
LIMK1-207ENST00000491052 RNF222A6NCQ9 220 aa9.42□□□□□ -0.9
LIMK1-207ENST00000491052 F6UB75 175 aa9.42□□□□□ -0.9
LIMK1-207ENST00000491052 H3BTX0 84 aa9.42□□□□□ -0.9
LIMK1-207ENST00000491052 ARPC5O15511 151 aa9.42□□□□□ -0.9
LIMK1-207ENST00000491052 SPRY2O43597 315 aa9.42□□□□□ -0.9
LIMK1-207ENST00000491052 IGKV3-20P01619 116 aa9.42□□□□□ -0.9
LIMK1-207ENST00000491052 SPP1P10451 314 aa9.42□□□□□ -0.9
LIMK1-207ENST00000491052 HLA-DRB4P13762 266 aa9.42□□□□□ -0.9
LIMK1-207ENST00000491052 GDF5OSQ5U4N7 250 aa9.42□□□□□ -0.9
LIMK1-207ENST00000491052 SPATA31B1PQ5VZV4 182 aa9.42□□□□□ -0.9
LIMK1-207ENST00000491052 EBLN2Q6P2I7 272 aa9.42□□□□□ -0.9
LIMK1-207ENST00000491052 MORN3Q6PF18 240 aaPredicted RBP9.42□□□□□ -0.9
LIMK1-207ENST00000491052 FOXI2Q6ZQN5 318 aa9.42□□□□□ -0.9
LIMK1-207ENST00000491052 HSD17B11Q8NBQ5 300 aa9.42□□□□□ -0.9
LIMK1-207ENST00000491052 ZNF738Q8NE65 137 aa9.42□□□□□ -0.9
LIMK1-207ENST00000491052 OVOL2Q9BRP0 275 aa9.42□□□□□ -0.9
LIMK1-207ENST00000491052 SAV1Q9H4B6 383 aaPredicted RBP9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms