RNA–Protein interactions for RNA: ENST00000490808.1

HDAC3-210, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 605 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-210ENST00000490808 VPREB3Q9UKI3 123 aa8.01□□□□□ -1.13
HDAC3-210ENST00000490808 YTHDF2Q9Y5A9 579 aaKnown RBP8.01□□□□□ -1.13
HDAC3-210ENST00000490808 TRAV5A0A0B4J249 113 aa8□□□□□ -1.13
HDAC3-210ENST00000490808 MDFIC2A0A1B0GVS7 189 aa8□□□□□ -1.13
HDAC3-210ENST00000490808 OR2T8A6NH00 312 aa8□□□□□ -1.13
HDAC3-210ENST00000490808 DNAJC9-AS1A6NH13 148 aa8□□□□□ -1.13
HDAC3-210ENST00000490808 C9JCJ5 164 aa8□□□□□ -1.13
HDAC3-210ENST00000490808 G3V318 75 aa8□□□□□ -1.13
HDAC3-210ENST00000490808 H3BRN7 92 aa8□□□□□ -1.13
HDAC3-210ENST00000490808 K7EQM0 130 aa8□□□□□ -1.13
HDAC3-210ENST00000490808 RPL7P18124 248 aaKnown RBP8□□□□□ -1.13
HDAC3-210ENST00000490808 CNN1P51911 297 aaKnown RBP8□□□□□ -1.13
HDAC3-210ENST00000490808 RPL19P84098 196 aaKnown RBP8□□□□□ -1.13
HDAC3-210ENST00000490808 KRTAP24-1Q3LI83 254 aa8□□□□□ -1.13
HDAC3-210ENST00000490808 RNF212Q495C1 297 aa8□□□□□ -1.13
HDAC3-210ENST00000490808 TMEM88Q6PEY1 159 aa8□□□□□ -1.13
HDAC3-210ENST00000490808 BCL6BQ8N143 479 aaPredicted RBP8□□□□□ -1.13
HDAC3-210ENST00000490808 ZNF503Q96F45 646 aa8□□□□□ -1.13
HDAC3-210ENST00000490808 NPFFR1Q9GZQ6 430 aa8□□□□□ -1.13
HDAC3-210ENST00000490808 BIN3Q9NQY0 253 aa8□□□□□ -1.13
HDAC3-210ENST00000490808 TENM1Q9UKZ4 2725 aa7.99□□□□□ -1.13
HDAC3-210ENST00000490808 HOXA3O43365 443 aaPredicted RBP7.99□□□□□ -1.13
HDAC3-210ENST00000490808 TGOLN2O43493 480 aa7.99□□□□□ -1.13
HDAC3-210ENST00000490808 AMY1AP04745 511 aa7.99□□□□□ -1.13
HDAC3-210ENST00000490808 CLEC3BP05452 202 aa7.99□□□□□ -1.13
HDAC3-210ENST00000490808 CRYBA1P05813 215 aa7.99□□□□□ -1.13
HDAC3-210ENST00000490808 CTSGP08311 255 aa7.99□□□□□ -1.13
HDAC3-210ENST00000490808 AKR1C3P42330 323 aa7.99□□□□□ -1.13
HDAC3-210ENST00000490808 MEOX2P50222 304 aa7.99□□□□□ -1.13
HDAC3-210ENST00000490808 TPPP2P59282 170 aa7.99□□□□□ -1.13
HDAC3-210ENST00000490808 UBE2G1P62253 170 aa7.99□□□□□ -1.13
HDAC3-210ENST00000490808 RPL23P62829 140 aaKnown RBP7.99□□□□□ -1.13
HDAC3-210ENST00000490808 PDE6HQ13956 83 aa7.99□□□□□ -1.13
HDAC3-210ENST00000490808 KIAA0141Q14154 515 aaPredicted RBP7.99□□□□□ -1.13
HDAC3-210ENST00000490808 C19orf54Q5BKX5 351 aa7.99□□□□□ -1.13
HDAC3-210ENST00000490808 KCNIP4Q6PIL6 250 aa7.99□□□□□ -1.13
HDAC3-210ENST00000490808 CBLN2Q8IUK8 224 aa7.99□□□□□ -1.13
HDAC3-210ENST00000490808 CMTM2Q8TAZ6 248 aa7.99□□□□□ -1.13
HDAC3-210ENST00000490808 FXYD5Q96DB9 178 aa7.99□□□□□ -1.13
HDAC3-210ENST00000490808 MS4A10Q96PG2 267 aa7.99□□□□□ -1.13
HDAC3-210ENST00000490808 GNB4Q9HAV0 340 aa7.99□□□□□ -1.13
HDAC3-210ENST00000490808 TMA7Q9Y2S6 64 aaKnown RBP7.99□□□□□ -1.13
HDAC3-210ENST00000490808 SCO2A0A1W2PP80 73 aa7.98□□□□□ -1.13
HDAC3-210ENST00000490808 PGPA6NDG6 321 aa7.98□□□□□ -1.13
HDAC3-210ENST00000490808 ZNF98A6NK75 572 aa7.98□□□□□ -1.13
HDAC3-210ENST00000490808 H7BYZ3 331 aa7.98□□□□□ -1.13
HDAC3-210ENST00000490808 NDUFA7O95182 113 aa7.98□□□□□ -1.13
HDAC3-210ENST00000490808 IGHV4-59P01825 116 aa7.98□□□□□ -1.13
HDAC3-210ENST00000490808 SLC25A5P05141 298 aaKnown RBP7.98□□□□□ -1.13
HDAC3-210ENST00000490808 PYYP10082 97 aa7.98□□□□□ -1.13
HDAC3-210ENST00000490808 GP9P14770 177 aa7.98□□□□□ -1.13
HDAC3-210ENST00000490808 CRYBB3P26998 211 aa7.98□□□□□ -1.13
HDAC3-210ENST00000490808 GPR183P32249 361 aa7.98□□□□□ -1.13
HDAC3-210ENST00000490808 GNG4P50150 75 aa7.98□□□□□ -1.13
HDAC3-210ENST00000490808 RANP62826 216 aaKnown RBP7.98□□□□□ -1.13
HDAC3-210ENST00000490808 PSG9Q00887 426 aa7.98□□□□□ -1.13
HDAC3-210ENST00000490808 FOXL1Q12952 345 aa7.98□□□□□ -1.13
HDAC3-210ENST00000490808 C1orf194Q5T5A4 169 aa7.98□□□□□ -1.13
HDAC3-210ENST00000490808 CLEC19AQ6UXS0 136 aa7.98□□□□□ -1.13
HDAC3-210ENST00000490808 ARL6IP6Q8N6S5 226 aa7.98□□□□□ -1.13
HDAC3-210ENST00000490808 C5orf17Q8NAS9 161 aa7.98□□□□□ -1.13
HDAC3-210ENST00000490808 BLNKQ8WV28 456 aa7.98□□□□□ -1.13
HDAC3-210ENST00000490808 SMIM12Q96EX1 92 aa7.98□□□□□ -1.13
HDAC3-210ENST00000490808 CHRDL1Q9BU40 450 aa7.98□□□□□ -1.13
HDAC3-210ENST00000490808 AAMDCQ9H7C9 122 aa7.98□□□□□ -1.13
HDAC3-210ENST00000490808 OTORQ9NRC9 128 aa7.98□□□□□ -1.13
HDAC3-210ENST00000490808 SERTM2A0A1B0GWG4 89 aa7.97□□□□□ -1.13
HDAC3-210ENST00000490808 SH2D7A6NKC9 451 aaPredicted RBP7.97□□□□□ -1.13
HDAC3-210ENST00000490808 LINC01548A6NM66 108 aa7.97□□□□□ -1.13
HDAC3-210ENST00000490808 PEX7O00628 323 aa7.97□□□□□ -1.13
HDAC3-210ENST00000490808 IGHV3-23P01764 117 aa7.97□□□□□ -1.13
HDAC3-210ENST00000490808 PF4V1P10720 104 aa7.97□□□□□ -1.13
HDAC3-210ENST00000490808 ATF4P18848 351 aaPredicted RBP7.97□□□□□ -1.13
HDAC3-210ENST00000490808 NPPCP23582 126 aa7.97□□□□□ -1.13
HDAC3-210ENST00000490808 PPIFP30405 207 aaKnown RBP7.97□□□□□ -1.13
HDAC3-210ENST00000490808 ARL3P36405 182 aa7.97□□□□□ -1.13
HDAC3-210ENST00000490808 RPL35P42766 123 aaKnown RBP7.97□□□□□ -1.13
HDAC3-210ENST00000490808 CSN1S1P47710 185 aa7.97□□□□□ -1.13
HDAC3-210ENST00000490808 MORN5Q5VZ52 161 aa7.97□□□□□ -1.13
HDAC3-210ENST00000490808 ZNF329Q86UD4 541 aa7.97□□□□□ -1.13
HDAC3-210ENST00000490808 OR8I2Q8N0Y5 310 aa7.97□□□□□ -1.13
HDAC3-210ENST00000490808 GRAMD2BQ96HH9 432 aa7.97□□□□□ -1.13
HDAC3-210ENST00000490808 METTL26Q96S19 204 aa7.97□□□□□ -1.13
HDAC3-210ENST00000490808 IMMP2LQ96T52 175 aa7.97□□□□□ -1.13
HDAC3-210ENST00000490808 ESM1Q9NQ30 184 aa7.97□□□□□ -1.13
HDAC3-210ENST00000490808 MLXQ9UH92 298 aa7.97□□□□□ -1.13
HDAC3-210ENST00000490808 EPDR1Q9UM22 224 aa7.97□□□□□ -1.13
HDAC3-210ENST00000490808 S4R3C0 116 aa7.97□□□□□ -1.13
HDAC3-210ENST00000490808 FBLL1A6NHQ2 334 aaKnown RBP7.96□□□□□ -1.14
HDAC3-210ENST00000490808 C1orf196B1AJZ1 125 aa7.96□□□□□ -1.14
HDAC3-210ENST00000490808 F8W735 103 aaPredicted RBP7.96□□□□□ -1.14
HDAC3-210ENST00000490808 NDUFA4O00483 81 aa7.96□□□□□ -1.14
HDAC3-210ENST00000490808 ZNF253O75346 499 aa7.96□□□□□ -1.14
HDAC3-210ENST00000490808 BMI1P35226 326 aa7.96□□□□□ -1.14
HDAC3-210ENST00000490808 GALR1P47211 349 aa7.96□□□□□ -1.14
HDAC3-210ENST00000490808 RAB5BP61020 215 aa7.96□□□□□ -1.14
HDAC3-210ENST00000490808 BLCAPP62952 87 aa7.96□□□□□ -1.14
HDAC3-210ENST00000490808 ZNF343Q6P1L6 599 aa7.96□□□□□ -1.14
HDAC3-210ENST00000490808 LINC01551Q86U37 167 aa7.96□□□□□ -1.14
HDAC3-210ENST00000490808 FMC1Q96HJ9 113 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms