RNA–Protein interactions for RNA: ENST00000490751.1

LDB1-204, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-204ENST00000490751 C11orf94C9JXX5 98 aa22.62■■□□□ 1.21
LDB1-204ENST00000490751 HYPMO75409 117 aa22.62■■□□□ 1.21
LDB1-204ENST00000490751 PLP1P60201 277 aa22.62■■□□□ 1.21
LDB1-204ENST00000490751 ARL16Q0P5N6 197 aa22.62■■□□□ 1.21
LDB1-204ENST00000490751 LINC00299Q6ZSB3 139 aa22.62■■□□□ 1.21
LDB1-204ENST00000490751 ZNF709Q8N972 641 aa22.62■■□□□ 1.21
LDB1-204ENST00000490751 A0A0J9YX75 114 aa22.61■■□□□ 1.21
LDB1-204ENST00000490751 L7N2F9 121 aa22.61■■□□□ 1.21
LDB1-204ENST00000490751 H2AFB2P0C5Z0 115 aa22.61■■□□□ 1.21
LDB1-204ENST00000490751 OR5G3P0C626 314 aa22.61■■□□□ 1.21
LDB1-204ENST00000490751 VAMP2P63027 116 aa22.61■■□□□ 1.21
LDB1-204ENST00000490751 SLC38A11Q08AI6 406 aa22.61■■□□□ 1.21
LDB1-204ENST00000490751 FAM78BQ5VT40 261 aa22.61■■□□□ 1.21
LDB1-204ENST00000490751 TEPPQ6URK8 271 aa22.61■■□□□ 1.21
LDB1-204ENST00000490751 ZNF705AQ6ZN79 300 aaPredicted RBP22.61■■□□□ 1.21
LDB1-204ENST00000490751 SLC35B3Q9H1N7 401 aa22.61■■□□□ 1.21
LDB1-204ENST00000490751 Q6ZTC4 211 aa22.6■■□□□ 1.21
LDB1-204ENST00000490751 C12orf45Q8N5I9 185 aaPredicted RBP22.6■■□□□ 1.21
LDB1-204ENST00000490751 UHRF2Q96PU4 802 aa22.6■■□□□ 1.21
LDB1-204ENST00000490751 CELA1Q9UNI1 258 aa22.6■■□□□ 1.21
LDB1-204ENST00000490751 LSM5Q9Y4Y9 91 aaKnown RBP22.6■■□□□ 1.21
LDB1-204ENST00000490751 FAM240BA0A1B0GVZ2 78 aa22.59■■□□□ 1.21
LDB1-204ENST00000490751 C5orf51A6NDU8 294 aa22.59■■□□□ 1.21
LDB1-204ENST00000490751 K7EPK0 472 aa22.59■■□□□ 1.21
LDB1-204ENST00000490751 PSG9Q00887 426 aa22.59■■□□□ 1.21
LDB1-204ENST00000490751 LGALS9CQ6DKI2 356 aa22.59■■□□□ 1.21
LDB1-204ENST00000490751 IGHV3OR16-12A0A075B7B8 117 aa22.58■■□□□ 1.21
LDB1-204ENST00000490751 ZNF705FA8MVS1 300 aaPredicted RBP22.58■■□□□ 1.21
LDB1-204ENST00000490751 ZNF705DP0CH99 300 aaPredicted RBP22.58■■□□□ 1.21
LDB1-204ENST00000490751 ZNF705BP0CI00 300 aaPredicted RBP22.58■■□□□ 1.21
LDB1-204ENST00000490751 RPL7P18124 248 aaKnown RBP22.58■■□□□ 1.21
LDB1-204ENST00000490751 FGL1Q08830 312 aa22.58■■□□□ 1.21
LDB1-204ENST00000490751 S100ZQ8WXG8 99 aa22.58■■□□□ 1.21
LDB1-204ENST00000490751 NEU1Q99519 415 aa22.58■■□□□ 1.21
LDB1-204ENST00000490751 GGACTQ9BVM4 153 aa22.58■■□□□ 1.21
LDB1-204ENST00000490751 ARL6Q9H0F7 186 aa22.58■■□□□ 1.21
LDB1-204ENST00000490751 TRAV10A0A0B4J240 114 aa22.56■■□□□ 1.2
LDB1-204ENST00000490751 IGLL5B9A064 214 aa22.56■■□□□ 1.2
LDB1-204ENST00000490751 DEDDO75618 318 aa22.56■■□□□ 1.2
LDB1-204ENST00000490751 TCTAP57738 103 aa22.56■■□□□ 1.2
LDB1-204ENST00000490751 IGFL4Q6B9Z1 124 aa22.56■■□□□ 1.2
LDB1-204ENST00000490751 MZT2BQ6NZ67 158 aa22.56■■□□□ 1.2
LDB1-204ENST00000490751 ZNF546Q86UE3 836 aa22.56■■□□□ 1.2
LDB1-204ENST00000490751 C2orf50Q96LR7 162 aa22.56■■□□□ 1.2
LDB1-204ENST00000490751 TRAV8-2A0A0B4J237 113 aa22.55■■□□□ 1.2
LDB1-204ENST00000490751 GOSR2O14653 212 aa22.55■■□□□ 1.2
LDB1-204ENST00000490751 BCAP31P51572 246 aa22.55■■□□□ 1.2
LDB1-204ENST00000490751 PATE2Q6UY27 113 aa22.55■■□□□ 1.2
LDB1-204ENST00000490751 ZNF767PQ75MW2 155 aa22.55■■□□□ 1.2
LDB1-204ENST00000490751 S100A7AQ86SG5 101 aa22.55■■□□□ 1.2
LDB1-204ENST00000490751 ARV1Q9H2C2 271 aa22.55■■□□□ 1.2
LDB1-204ENST00000490751 AGPAT2O15120 278 aa22.54■■□□□ 1.2
LDB1-204ENST00000490751 CAV2P51636 162 aa22.54■■□□□ 1.2
LDB1-204ENST00000490751 ASAH1Q13510 395 aa22.54■■□□□ 1.2
LDB1-204ENST00000490751 C12orf74Q32Q52 190 aa22.54■■□□□ 1.2
LDB1-204ENST00000490751 RNF182Q8N6D2 247 aa22.54■■□□□ 1.2
LDB1-204ENST00000490751 C11orf1Q9H5F2 150 aa22.54■■□□□ 1.2
LDB1-204ENST00000490751 KMT2AQ03164 3969 aa22.54■■□□□ 1.2
LDB1-204ENST00000490751 SMIM9A6NGZ8 99 aa22.53■■□□□ 1.2
LDB1-204ENST00000490751 A8MTW9 85 aa22.53■■□□□ 1.2
LDB1-204ENST00000490751 RPP25LQ8N5L8 163 aaKnown RBP22.53■■□□□ 1.2
LDB1-204ENST00000490751 APLNQ9ULZ1 77 aa22.53■■□□□ 1.2
LDB1-204ENST00000490751 PXDC1Q5TGL8 231 aa22.52■■□□□ 1.2
LDB1-204ENST00000490751 MGST2Q99735 147 aa22.52■■□□□ 1.2
LDB1-204ENST00000490751 GOLT1BQ9Y3E0 138 aa22.52■■□□□ 1.2
LDB1-204ENST00000490751 A0A087X0K7 114 aa22.51■■□□□ 1.19
LDB1-204ENST00000490751 FAM24AA6NFZ4 105 aa22.51■■□□□ 1.19
LDB1-204ENST00000490751 CST7O76096 145 aa22.51■■□□□ 1.19
LDB1-204ENST00000490751 AMTNQ6UX39 209 aa22.51■■□□□ 1.19
LDB1-204ENST00000490751 C1orf158Q8N1D5 194 aa22.51■■□□□ 1.19
LDB1-204ENST00000490751 RFNGQ9Y644 331 aa22.51■■□□□ 1.19
LDB1-204ENST00000490751 BIRC6Q9NR09 4857 aa22.51■■□□□ 1.19
LDB1-204ENST00000490751 VPS13DQ5THJ4 4388 aa22.5■■□□□ 1.19
LDB1-204ENST00000490751 DUSP14O95147 198 aaKnown RBP22.5■■□□□ 1.19
LDB1-204ENST00000490751 PVALBP20472 110 aaPredicted RBP22.5■■□□□ 1.19
LDB1-204ENST00000490751 CNN1P51911 297 aaKnown RBP22.5■■□□□ 1.19
LDB1-204ENST00000490751 EMP1P54849 157 aa22.5■■□□□ 1.19
LDB1-204ENST00000490751 S100A10P60903 97 aa22.5■■□□□ 1.19
LDB1-204ENST00000490751 ZNF738Q8NE65 137 aa22.5■■□□□ 1.19
LDB1-204ENST00000490751 RNF24Q9Y225 148 aa22.5■■□□□ 1.19
LDB1-204ENST00000490751 TMEM189A5PLL7 270 aa22.49■■□□□ 1.19
LDB1-204ENST00000490751 LINC00305Q7Z4B0 112 aa22.49■■□□□ 1.19
LDB1-204ENST00000490751 A6NHS1 94 aa22.48■■□□□ 1.19
LDB1-204ENST00000490751 MRPS12O15235 138 aaKnown RBP22.48■■□□□ 1.19
LDB1-204ENST00000490751 IL15RAQ13261 267 aa22.48■■□□□ 1.19
LDB1-204ENST00000490751 RAB32Q13637 225 aa22.48■■□□□ 1.19
LDB1-204ENST00000490751 IGHV4-4A0A075B6R2 117 aa22.47■■□□□ 1.19
LDB1-204ENST00000490751 DEFB131BA0A096LNP1 70 aa22.47■■□□□ 1.19
LDB1-204ENST00000490751 COX7A2P2O60397 106 aa22.47■■□□□ 1.19
LDB1-204ENST00000490751 SPART-AS1P0CW21 52 aa22.47■■□□□ 1.19
LDB1-204ENST00000490751 CXCL3P19876 107 aa22.47■■□□□ 1.19
LDB1-204ENST00000490751 OR11H7Q8NGC8 314 aa22.47■■□□□ 1.19
LDB1-204ENST00000490751 ENKURQ8TC29 256 aa22.47■■□□□ 1.19
LDB1-204ENST00000490751 LRRC20Q8TCA0 184 aa22.47■■□□□ 1.19
LDB1-204ENST00000490751 IGF2BP2-AS1Q96M15 143 aa22.47■■□□□ 1.19
LDB1-204ENST00000490751 UPK1BO75841 260 aa22.46■■□□□ 1.19
LDB1-204ENST00000490751 HBE1P02100 147 aa22.46■■□□□ 1.19
LDB1-204ENST00000490751 CAMLGP49069 296 aa22.46■■□□□ 1.19
LDB1-204ENST00000490751 LYRM2Q9NU23 88 aaPredicted RBP22.46■■□□□ 1.19
LDB1-204ENST00000490751 UQCC1Q9NVA1 299 aa22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 137.8 ms