RNA–Protein interactions for RNA: ENST00000490193.5

USP39-216, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 1,028 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-216ENST00000490193 GPR141Q7Z602 305 aa5.68□□□□□ -1.5
USP39-216ENST00000490193 OR8I2Q8N0Y5 310 aa5.68□□□□□ -1.5
USP39-216ENST00000490193 LYPD1Q8N2G4 141 aa5.68□□□□□ -1.5
USP39-216ENST00000490193 MARCH1Q8TCQ1 289 aa5.68□□□□□ -1.5
USP39-216ENST00000490193 YIPF6Q96EC8 236 aa5.68□□□□□ -1.5
USP39-216ENST00000490193 C16orf92Q96LL3 132 aa5.68□□□□□ -1.5
USP39-216ENST00000490193 Q9H521 79 aa5.68□□□□□ -1.5
USP39-216ENST00000490193 NAA60Q9H7X0 242 aa5.68□□□□□ -1.5
USP39-216ENST00000490193 HSPB7Q9UBY9 170 aa5.68□□□□□ -1.5
USP39-216ENST00000490193 MTFP1Q9UDX5 166 aa5.68□□□□□ -1.5
USP39-216ENST00000490193 SLC45A2Q9UMX9 530 aa5.68□□□□□ -1.5
USP39-216ENST00000490193 TMEM56-RWDD3S4R434 201 aa5.68□□□□□ -1.5
USP39-216ENST00000490193 SRRM2Q9UQ35 2752 aaKnown RBP5.67□□□□□ -1.5
USP39-216ENST00000490193 M0R2Z0 102 aa5.67□□□□□ -1.5
USP39-216ENST00000490193 CFDP00746 253 aaPredicted RBP5.67□□□□□ -1.5
USP39-216ENST00000490193 SULT1A3P0DMM9 295 aa5.67□□□□□ -1.5
USP39-216ENST00000490193 SULT1A4P0DMN0 295 aa5.67□□□□□ -1.5
USP39-216ENST00000490193 AZU1P20160 251 aa5.67□□□□□ -1.5
USP39-216ENST00000490193 GALR1P47211 349 aa5.67□□□□□ -1.5
USP39-216ENST00000490193 LYZP61626 148 aa5.67□□□□□ -1.5
USP39-216ENST00000490193 MEF2DQ14814 521 aa5.67□□□□□ -1.5
USP39-216ENST00000490193 FCN2Q15485 313 aa5.67□□□□□ -1.5
USP39-216ENST00000490193 SURF2Q15527 256 aaPredicted RBP5.67□□□□□ -1.5
USP39-216ENST00000490193 TMEM268Q5VZI3 342 aa5.67□□□□□ -1.5
USP39-216ENST00000490193 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.67□□□□□ -1.5
USP39-216ENST00000490193 Q6ZRN7 208 aaPredicted RBP5.67□□□□□ -1.5
USP39-216ENST00000490193 BAP18Q8IXM2 172 aa5.67□□□□□ -1.5
USP39-216ENST00000490193 LGI3Q8N145 548 aa5.67□□□□□ -1.5
USP39-216ENST00000490193 TMEM256Q8N2U0 113 aa5.67□□□□□ -1.5
USP39-216ENST00000490193 TMEM229BQ8NBD8 167 aa5.67□□□□□ -1.5
USP39-216ENST00000490193 OR4D10Q8NGI6 311 aa5.67□□□□□ -1.5
USP39-216ENST00000490193 OR4D5Q8NGN0 318 aa5.67□□□□□ -1.5
USP39-216ENST00000490193 OR52I2Q8NH67 350 aa5.67□□□□□ -1.5
USP39-216ENST00000490193 DTD1Q8TEA8 209 aa5.67□□□□□ -1.5
USP39-216ENST00000490193 IL22RA2Q969J5 263 aa5.67□□□□□ -1.5
USP39-216ENST00000490193 C16orf74Q96GX8 76 aa5.67□□□□□ -1.5
USP39-216ENST00000490193 SLC35E1Q96K37 410 aa5.67□□□□□ -1.5
USP39-216ENST00000490193 TRGV9Q99603 122 aa5.67□□□□□ -1.5
USP39-216ENST00000490193 RTBDNQ9BSG5 229 aaPredicted RBP5.67□□□□□ -1.5
USP39-216ENST00000490193 SLC25A32Q9H2D1 315 aa5.67□□□□□ -1.5
USP39-216ENST00000490193 PRELID1Q9Y255 219 aa5.67□□□□□ -1.5
USP39-216ENST00000490193 IGKV1OR2-108A0A075B7D4 117 aa5.66□□□□□ -1.5
USP39-216ENST00000490193 CRYM-AS1A6NIL9 109 aa5.66□□□□□ -1.5
USP39-216ENST00000490193 H3BNG1 76 aa5.66□□□□□ -1.5
USP39-216ENST00000490193 GABARAPH6UMI1 98 aa5.66□□□□□ -1.5
USP39-216ENST00000490193 HPGDSO60760 199 aa5.66□□□□□ -1.5
USP39-216ENST00000490193 GABARAPO95166 117 aa5.66□□□□□ -1.5
USP39-216ENST00000490193 TNFAIP8O95379 198 aa5.66□□□□□ -1.5
USP39-216ENST00000490193 RAB3DO95716 219 aa5.66□□□□□ -1.5
USP39-216ENST00000490193 XGP55808 180 aa5.66□□□□□ -1.5
USP39-216ENST00000490193 TAS2R19P59542 299 aa5.66□□□□□ -1.5
USP39-216ENST00000490193 TAS2R60P59551 318 aa5.66□□□□□ -1.5
USP39-216ENST00000490193 LSM3P62310 102 aaKnown RBP5.66□□□□□ -1.5
USP39-216ENST00000490193 SCGB2B2Q4G0G5 96 aa5.66□□□□□ -1.5
USP39-216ENST00000490193 GPR107Q5VW38 600 aa5.66□□□□□ -1.5
USP39-216ENST00000490193 CDPF1Q6NVV7 123 aa5.66□□□□□ -1.5
USP39-216ENST00000490193 ZNF493Q6ZR52 646 aa5.66□□□□□ -1.5
USP39-216ENST00000490193 LINC00612Q8N6U2 182 aa5.66□□□□□ -1.5
USP39-216ENST00000490193 THAP8Q8NA92 274 aa5.66□□□□□ -1.5
USP39-216ENST00000490193 RNASE8Q8TDE3 154 aaKnown RBP5.66□□□□□ -1.5
USP39-216ENST00000490193 RXFP4Q8TDU9 374 aa5.66□□□□□ -1.5
USP39-216ENST00000490193 PPP1R14BQ96C90 147 aa5.66□□□□□ -1.5
USP39-216ENST00000490193 GPR82Q96P67 336 aa5.66□□□□□ -1.5
USP39-216ENST00000490193 C14orf166Q9Y224 244 aaKnown RBP5.66□□□□□ -1.5
USP39-216ENST00000490193 MRPS16Q9Y3D3 137 aaKnown RBP5.66□□□□□ -1.5
USP39-216ENST00000490193 TIMM8BQ9Y5J9 83 aaPredicted RBP5.66□□□□□ -1.5
USP39-216ENST00000490193 TRAV8-2A0A0B4J237 113 aa5.65□□□□□ -1.5
USP39-216ENST00000490193 ZNF98A6NK75 572 aa5.65□□□□□ -1.5
USP39-216ENST00000490193 M6PRP20645 277 aa5.65□□□□□ -1.5
USP39-216ENST00000490193 CCR6P51684 374 aa5.65□□□□□ -1.5
USP39-216ENST00000490193 OR2F1Q13607 317 aa5.65□□□□□ -1.5
USP39-216ENST00000490193 SMCO1Q147U7 214 aa5.65□□□□□ -1.5
USP39-216ENST00000490193 ESRGQ1W209 222 aa5.65□□□□□ -1.5
USP39-216ENST00000490193 RNASE12Q5GAN4 147 aaKnown RBP5.65□□□□□ -1.5
USP39-216ENST00000490193 Q5VSD8 79 aa5.65□□□□□ -1.5
USP39-216ENST00000490193 KRTAP5-3Q6L8H2 238 aa5.65□□□□□ -1.5
USP39-216ENST00000490193 STEAP1BQ6NZ63 245 aa5.65□□□□□ -1.5
USP39-216ENST00000490193 OR1B1Q8NGR6 318 aa5.65□□□□□ -1.5
USP39-216ENST00000490193 OR10J6PQ8NGY7 276 aa5.65□□□□□ -1.5
USP39-216ENST00000490193 TMEM263Q8WUH6 116 aaKnown RBP5.65□□□□□ -1.5
USP39-216ENST00000490193 C15orf40Q8WUR7 153 aa5.65□□□□□ -1.5
USP39-216ENST00000490193 GNPNAT1Q96EK6 184 aaPredicted RBP5.65□□□□□ -1.5
USP39-216ENST00000490193 RSG1Q9BU20 258 aa5.65□□□□□ -1.5
USP39-216ENST00000490193 KRTAP9-3Q9BYQ3 159 aa5.65□□□□□ -1.5
USP39-216ENST00000490193 RBKSQ9H477 322 aa5.65□□□□□ -1.5
USP39-216ENST00000490193 ZNF586Q9NXT0 402 aa5.65□□□□□ -1.5
USP39-216ENST00000490193 GPR132Q9UNW8 380 aa5.65□□□□□ -1.5
USP39-216ENST00000490193 TRAV12-2A0A075B6T6 113 aa5.64□□□□□ -1.51
USP39-216ENST00000490193 TRAV26-1A0A087WT03 109 aa5.64□□□□□ -1.51
USP39-216ENST00000490193 A0A0B4J2A0 478 aa5.64□□□□□ -1.51
USP39-216ENST00000490193 ZNF701M0R085 212 aaPredicted RBP5.64□□□□□ -1.51
USP39-216ENST00000490193 LINC00315P59091 139 aa5.64□□□□□ -1.51
USP39-216ENST00000490193 SSBP1Q04837 148 aaKnown RBP5.64□□□□□ -1.51
USP39-216ENST00000490193 GGNBP1Q5YKI7 109 aa5.64□□□□□ -1.51
USP39-216ENST00000490193 TMEM144Q7Z5S9 345 aa5.64□□□□□ -1.51
USP39-216ENST00000490193 FRZBQ92765 325 aa5.64□□□□□ -1.51
USP39-216ENST00000490193 UHRF2Q96PU4 802 aa5.64□□□□□ -1.51
USP39-216ENST00000490193 LINC01587Q99440 93 aa5.64□□□□□ -1.51
USP39-216ENST00000490193 SLC25A39Q9BZJ4 359 aaPredicted RBP5.64□□□□□ -1.51
USP39-216ENST00000490193 SLC25A22Q9H936 323 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms