RNA–Protein interactions for RNA: ENST00000489944.1

SEMA6C-208, Transcript of semaphorin 6C, humanhuman

TSL 3

Gene SEMA6C, Length 423 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-208ENST00000489944 DEDDO75618 318 aa8.55□□□□□ -1.04
SEMA6C-208ENST00000489944 HBE1P02100 147 aa8.55□□□□□ -1.04
SEMA6C-208ENST00000489944 P0DMU3 169 aa8.55□□□□□ -1.04
SEMA6C-208ENST00000489944 FAM231AP0DMU4 169 aa8.55□□□□□ -1.04
SEMA6C-208ENST00000489944 FAM231CP0DMU5 169 aa8.55□□□□□ -1.04
SEMA6C-208ENST00000489944 BTCP35070 178 aa8.55□□□□□ -1.04
SEMA6C-208ENST00000489944 RAB31Q13636 194 aa8.55□□□□□ -1.04
SEMA6C-208ENST00000489944 Q6ZTC4 211 aa8.55□□□□□ -1.04
SEMA6C-208ENST00000489944 ZNF709Q8N972 641 aa8.55□□□□□ -1.04
SEMA6C-208ENST00000489944 ZBTB8BQ8NAP8 495 aaPredicted RBP8.55□□□□□ -1.04
SEMA6C-208ENST00000489944 OR4B1Q8NGF8 309 aa8.55□□□□□ -1.04
SEMA6C-208ENST00000489944 IGF2BP2-AS1Q96M15 143 aa8.55□□□□□ -1.04
SEMA6C-208ENST00000489944 RSG1Q9BU20 258 aa8.55□□□□□ -1.04
SEMA6C-208ENST00000489944 SLC25A39Q9BZJ4 359 aaPredicted RBP8.55□□□□□ -1.04
SEMA6C-208ENST00000489944 SLC25A22Q9H936 323 aa8.55□□□□□ -1.04
SEMA6C-208ENST00000489944 IGHV4-4A0A075B6R2 117 aa8.54□□□□□ -1.04
SEMA6C-208ENST00000489944 SMCO3A2RU48 225 aa8.54□□□□□ -1.04
SEMA6C-208ENST00000489944 H3BP45 60 aa8.54□□□□□ -1.04
SEMA6C-208ENST00000489944 LINC00869P0C866 280 aa8.54□□□□□ -1.04
SEMA6C-208ENST00000489944 ANXA7P20073 488 aaKnown RBP8.54□□□□□ -1.04
SEMA6C-208ENST00000489944 FAM78BQ5VT40 261 aa8.54□□□□□ -1.04
SEMA6C-208ENST00000489944 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.54□□□□□ -1.04
SEMA6C-208ENST00000489944 TMEM256Q8N2U0 113 aa8.54□□□□□ -1.04
SEMA6C-208ENST00000489944 NDUFAF3Q9BU61 184 aa8.54□□□□□ -1.04
SEMA6C-208ENST00000489944 C20orf85Q9H1P6 137 aa8.54□□□□□ -1.04
SEMA6C-208ENST00000489944 FLVCR2Q9UPI3 526 aa8.54□□□□□ -1.04
SEMA6C-208ENST00000489944 GOSR2O14653 212 aa8.53□□□□□ -1.04
SEMA6C-208ENST00000489944 TCRBP04435 133 aa8.53□□□□□ -1.04
SEMA6C-208ENST00000489944 PVALBP20472 110 aaPredicted RBP8.53□□□□□ -1.04
SEMA6C-208ENST00000489944 TSPOP30536 169 aa8.53□□□□□ -1.04
SEMA6C-208ENST00000489944 RRN3P1Q2M238 152 aa8.53□□□□□ -1.04
SEMA6C-208ENST00000489944 C12orf74Q32Q52 190 aa8.53□□□□□ -1.04
SEMA6C-208ENST00000489944 GDF5OSQ5U4N7 250 aa8.53□□□□□ -1.04
SEMA6C-208ENST00000489944 S100ZQ8WXG8 99 aa8.53□□□□□ -1.04
SEMA6C-208ENST00000489944 SLC50A1Q9BRV3 221 aa8.53□□□□□ -1.04
SEMA6C-208ENST00000489944 C7orf66A4D0T2 115 aa8.52□□□□□ -1.05
SEMA6C-208ENST00000489944 L7N2F9 121 aa8.52□□□□□ -1.05
SEMA6C-208ENST00000489944 PLA2G10O15496 165 aa8.52□□□□□ -1.05
SEMA6C-208ENST00000489944 OR5G3P0C626 314 aa8.52□□□□□ -1.05
SEMA6C-208ENST00000489944 METTL15P1P0C7V9 234 aa8.52□□□□□ -1.05
SEMA6C-208ENST00000489944 VAMP2P63027 116 aa8.52□□□□□ -1.05
SEMA6C-208ENST00000489944 GUK1Q16774 197 aa8.52□□□□□ -1.05
SEMA6C-208ENST00000489944 MZT2BQ6NZ67 158 aa8.52□□□□□ -1.05
SEMA6C-208ENST00000489944 LCN15Q6UWW0 184 aa8.52□□□□□ -1.05
SEMA6C-208ENST00000489944 ZNF431Q8TF32 576 aaPredicted RBP8.52□□□□□ -1.05
SEMA6C-208ENST00000489944 CHAC2Q8WUX2 184 aa8.52□□□□□ -1.05
SEMA6C-208ENST00000489944 C20orf144Q9BQM9 153 aa8.52□□□□□ -1.05
SEMA6C-208ENST00000489944 NIPSNAP3BQ9BS92 247 aa8.52□□□□□ -1.05
SEMA6C-208ENST00000489944 GSKIPQ9P0R6 139 aa8.52□□□□□ -1.05
SEMA6C-208ENST00000489944 DKK2Q9UBU2 259 aa8.52□□□□□ -1.05
SEMA6C-208ENST00000489944 RCL1Q9Y2P8 373 aaKnown RBP8.52□□□□□ -1.05
SEMA6C-208ENST00000489944 SCGB1D2O95969 90 aa8.51□□□□□ -1.05
SEMA6C-208ENST00000489944 INSP01308 110 aa8.51□□□□□ -1.05
SEMA6C-208ENST00000489944 MBPP02686 304 aaPredicted RBP8.51□□□□□ -1.05
SEMA6C-208ENST00000489944 GATA2P23769 480 aaPredicted RBP8.51□□□□□ -1.05
SEMA6C-208ENST00000489944 CNN1P51911 297 aaKnown RBP8.51□□□□□ -1.05
SEMA6C-208ENST00000489944 AMTNQ6UX39 209 aa8.51□□□□□ -1.05
SEMA6C-208ENST00000489944 TMEM182Q6ZP80 229 aaPredicted RBP8.51□□□□□ -1.05
SEMA6C-208ENST00000489944 Q6ZRG5 221 aa8.51□□□□□ -1.05
SEMA6C-208ENST00000489944 LINC00336Q6ZUF6 198 aa8.51□□□□□ -1.05
SEMA6C-208ENST00000489944 BPIFA4PQ86YQ2 179 aa8.51□□□□□ -1.05
SEMA6C-208ENST00000489944 LRRC20Q8TCA0 184 aa8.51□□□□□ -1.05
SEMA6C-208ENST00000489944 C2orf50Q96LR7 162 aa8.51□□□□□ -1.05
SEMA6C-208ENST00000489944 TMEM208Q9BTX3 173 aa8.51□□□□□ -1.05
SEMA6C-208ENST00000489944 SCRT1Q9BWW7 348 aa8.51□□□□□ -1.05
SEMA6C-208ENST00000489944 ARV1Q9H2C2 271 aa8.51□□□□□ -1.05
SEMA6C-208ENST00000489944 CELA1Q9UNI1 258 aa8.51□□□□□ -1.05
SEMA6C-208ENST00000489944 KMT2AQ03164 3969 aa8.51□□□□□ -1.05
SEMA6C-208ENST00000489944 LOC102723971A0A1B0GUV8 181 aa8.5□□□□□ -1.05
SEMA6C-208ENST00000489944 LINC00854A0A1B0GVQ3 168 aa8.5□□□□□ -1.05
SEMA6C-208ENST00000489944 LYRM9A8MSI8 78 aa8.5□□□□□ -1.05
SEMA6C-208ENST00000489944 AGPAT2O15120 278 aa8.5□□□□□ -1.05
SEMA6C-208ENST00000489944 MPDU1O75352 247 aa8.5□□□□□ -1.05
SEMA6C-208ENST00000489944 IGKV3-20P01619 116 aa8.5□□□□□ -1.05
SEMA6C-208ENST00000489944 S100A11P31949 105 aa8.5□□□□□ -1.05
SEMA6C-208ENST00000489944 FAM3BP58499 235 aaPredicted RBP8.5□□□□□ -1.05
SEMA6C-208ENST00000489944 HBG1P69891 147 aa8.5□□□□□ -1.05
SEMA6C-208ENST00000489944 HBG2P69892 147 aa8.5□□□□□ -1.05
SEMA6C-208ENST00000489944 PSG3Q16557 428 aa8.5□□□□□ -1.05
SEMA6C-208ENST00000489944 C1orf158Q8N1D5 194 aa8.5□□□□□ -1.05
SEMA6C-208ENST00000489944 C12orf45Q8N5I9 185 aaPredicted RBP8.5□□□□□ -1.05
SEMA6C-208ENST00000489944 RPP25LQ8N5L8 163 aaKnown RBP8.5□□□□□ -1.05
SEMA6C-208ENST00000489944 POM121L12Q8N7R1 296 aa8.5□□□□□ -1.05
SEMA6C-208ENST00000489944 OR11H7Q8NGC8 314 aa8.5□□□□□ -1.05
SEMA6C-208ENST00000489944 OR1L4Q8NGR5 311 aa8.5□□□□□ -1.05
SEMA6C-208ENST00000489944 C17orf77Q96MU5 243 aa8.5□□□□□ -1.05
SEMA6C-208ENST00000489944 PFDN5Q99471 154 aa8.5□□□□□ -1.05
SEMA6C-208ENST00000489944 ARL6Q9H0F7 186 aa8.5□□□□□ -1.05
SEMA6C-208ENST00000489944 SLC35B3Q9H1N7 401 aa8.5□□□□□ -1.05
SEMA6C-208ENST00000489944 NUDT15Q9NV35 164 aa8.5□□□□□ -1.05
SEMA6C-208ENST00000489944 PXMP4Q9Y6I8 212 aa8.5□□□□□ -1.05
SEMA6C-208ENST00000489944 TRAV8-2A0A0B4J237 113 aa8.49□□□□□ -1.05
SEMA6C-208ENST00000489944 BOLA2-SMG1P6H3BVE0 249 aa8.49□□□□□ -1.05
SEMA6C-208ENST00000489944 COX7A2P2O60397 106 aa8.49□□□□□ -1.05
SEMA6C-208ENST00000489944 ZNF253O75346 499 aa8.49□□□□□ -1.05
SEMA6C-208ENST00000489944 CXCL3P19876 107 aa8.49□□□□□ -1.05
SEMA6C-208ENST00000489944 RRAS2P62070 204 aaPredicted RBP8.49□□□□□ -1.05
SEMA6C-208ENST00000489944 ATP6V1FQ16864 119 aa8.49□□□□□ -1.05
SEMA6C-208ENST00000489944 VWC2Q2TAL6 325 aa8.49□□□□□ -1.05
SEMA6C-208ENST00000489944 RNF212Q495C1 297 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms