RNA–Protein interactions for RNA: ENST00000489758.1

CLIC4-203, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 439 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-203ENST00000489758 C17orf77Q96MU5 243 aa12.08□□□□□ -0.48
CLIC4-203ENST00000489758 BOLA1Q9Y3E2 137 aa12.08□□□□□ -0.48
CLIC4-203ENST00000489758 SMAD5-AS1Q9Y6J3 95 aa12.08□□□□□ -0.48
CLIC4-203ENST00000489758 HELTA6NFD8 242 aa12.07□□□□□ -0.48
CLIC4-203ENST00000489758 MRPS12O15235 138 aaKnown RBP12.07□□□□□ -0.48
CLIC4-203ENST00000489758 TPT1P13693 172 aaKnown RBP12.07□□□□□ -0.48
CLIC4-203ENST00000489758 EIF5AP63241 154 aaKnown RBP12.07□□□□□ -0.48
CLIC4-203ENST00000489758 ACOT6Q3I5F7 207 aaPredicted RBP12.07□□□□□ -0.48
CLIC4-203ENST00000489758 FAM78BQ5VT40 261 aa12.07□□□□□ -0.48
CLIC4-203ENST00000489758 SIGLEC15Q6ZMC9 328 aa12.07□□□□□ -0.48
CLIC4-203ENST00000489758 RBPMS2Q6ZRY4 209 aaKnown RBP12.07□□□□□ -0.48
CLIC4-203ENST00000489758 MIR17HGQ75NE6 70 aa12.07□□□□□ -0.48
CLIC4-203ENST00000489758 SLC51BQ86UW2 128 aa12.07□□□□□ -0.48
CLIC4-203ENST00000489758 OR8I2Q8N0Y5 310 aa12.07□□□□□ -0.48
CLIC4-203ENST00000489758 PLA2G2EQ9NZK7 142 aa12.07□□□□□ -0.48
CLIC4-203ENST00000489758 FUT9Q9Y231 359 aa12.07□□□□□ -0.48
CLIC4-203ENST00000489758 ZNF256Q9Y2P7 627 aaPredicted RBP12.07□□□□□ -0.48
CLIC4-203ENST00000489758 SEC11BP0C7V7 166 aa12.06□□□□□ -0.48
CLIC4-203ENST00000489758 RPP25LQ8N5L8 163 aaKnown RBP12.06□□□□□ -0.48
CLIC4-203ENST00000489758 OR10G4Q8NGN3 311 aa12.06□□□□□ -0.48
CLIC4-203ENST00000489758 OR10G9Q8NGN4 311 aa12.06□□□□□ -0.48
CLIC4-203ENST00000489758 OR10G7Q8NGN6 311 aa12.06□□□□□ -0.48
CLIC4-203ENST00000489758 FAM167A-AS1Q96KT0 104 aa12.06□□□□□ -0.48
CLIC4-203ENST00000489758 GPR82Q96P67 336 aa12.06□□□□□ -0.48
CLIC4-203ENST00000489758 SPAG8Q99932 426 aaPredicted RBP12.06□□□□□ -0.48
CLIC4-203ENST00000489758 MRPL32Q9BYC8 188 aaKnown RBP12.06□□□□□ -0.48
CLIC4-203ENST00000489758 MS4A6AQ9H2W1 248 aa12.06□□□□□ -0.48
CLIC4-203ENST00000489758 RPRMQ9NS64 109 aa12.06□□□□□ -0.48
CLIC4-203ENST00000489758 MGAM2Q2M2H8 2515 aa12.06□□□□□ -0.48
CLIC4-203ENST00000489758 IGKV3-7A0A075B6H7 116 aa12.05□□□□□ -0.48
CLIC4-203ENST00000489758 MBP02144 154 aa12.05□□□□□ -0.48
CLIC4-203ENST00000489758 RPL7P18124 248 aaKnown RBP12.05□□□□□ -0.48
CLIC4-203ENST00000489758 RHOBP62745 196 aa12.05□□□□□ -0.48
CLIC4-203ENST00000489758 RPL11P62913 178 aaKnown RBP12.05□□□□□ -0.48
CLIC4-203ENST00000489758 GUCA2BQ16661 112 aa12.05□□□□□ -0.48
CLIC4-203ENST00000489758 TMEM41BQ5BJD5 291 aa12.05□□□□□ -0.48
CLIC4-203ENST00000489758 GBGT1Q8N5D6 347 aa12.05□□□□□ -0.48
CLIC4-203ENST00000489758 DCANP1Q8TF63 244 aa12.05□□□□□ -0.48
CLIC4-203ENST00000489758 SLC25A2Q9BXI2 301 aa12.05□□□□□ -0.48
CLIC4-203ENST00000489758 RNF24Q9Y225 148 aa12.05□□□□□ -0.48
CLIC4-203ENST00000489758 TRAV2A0A0B4J234 112 aa12.04□□□□□ -0.48
CLIC4-203ENST00000489758 GP9P14770 177 aa12.04□□□□□ -0.48
CLIC4-203ENST00000489758 C4BPBP20851 252 aa12.04□□□□□ -0.48
CLIC4-203ENST00000489758 GALR1P47211 349 aa12.04□□□□□ -0.48
CLIC4-203ENST00000489758 DEFA6Q01524 100 aa12.04□□□□□ -0.48
CLIC4-203ENST00000489758 FAM122CQ6P4D5 195 aa12.04□□□□□ -0.48
CLIC4-203ENST00000489758 TMED6Q8WW62 240 aa12.04□□□□□ -0.48
CLIC4-203ENST00000489758 NRN1Q9NPD7 142 aa12.04□□□□□ -0.48
CLIC4-203ENST00000489758 ZMAT5Q9UDW3 170 aaKnown RBP12.04□□□□□ -0.48
CLIC4-203ENST00000489758 K7EQG2 157 aa12.03□□□□□ -0.48
CLIC4-203ENST00000489758 SOCS3O14543 225 aa12.03□□□□□ -0.48
CLIC4-203ENST00000489758 EIF3GO75821 320 aaKnown RBP eCLIP12.03□□□□□ -0.48
CLIC4-203ENST00000489758 IGLC2P0DOY2 106 aa12.03□□□□□ -0.48
CLIC4-203ENST00000489758 TFPI2P48307 235 aa12.03□□□□□ -0.48
CLIC4-203ENST00000489758 ZNF726P1Q15940 193 aa12.03□□□□□ -0.48
CLIC4-203ENST00000489758 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.03□□□□□ -0.48
CLIC4-203ENST00000489758 BPIFA4PQ86YQ2 179 aa12.03□□□□□ -0.48
CLIC4-203ENST00000489758 FAM24BQ8N5W8 94 aa12.03□□□□□ -0.48
CLIC4-203ENST00000489758 STXBP6Q8NFX7 210 aa12.03□□□□□ -0.48
CLIC4-203ENST00000489758 ZNF503Q96F45 646 aa12.03□□□□□ -0.48
CLIC4-203ENST00000489758 TMEM14CQ9P0S9 112 aa12.03□□□□□ -0.48
CLIC4-203ENST00000489758 A0A087X0K7 114 aa12.02□□□□□ -0.49
CLIC4-203ENST00000489758 OR4C46A6NHA9 309 aa12.02□□□□□ -0.49
CLIC4-203ENST00000489758 H3BQ15 152 aa12.02□□□□□ -0.49
CLIC4-203ENST00000489758 PAFAH1B2P68402 229 aa12.02□□□□□ -0.49
CLIC4-203ENST00000489758 AKR1C8PQ5T2L2 129 aa12.02□□□□□ -0.49
CLIC4-203ENST00000489758 SSX7Q7RTT5 188 aa12.02□□□□□ -0.49
CLIC4-203ENST00000489758 PRR25Q96S07 402 aa12.02□□□□□ -0.49
CLIC4-203ENST00000489758 MEGF8Q7Z7M0 2845 aa12.02□□□□□ -0.49
CLIC4-203ENST00000489758 A0A1W2PPV4 95 aa12.01□□□□□ -0.49
CLIC4-203ENST00000489758 DNASE2O00115 360 aaPredicted RBP12.01□□□□□ -0.49
CLIC4-203ENST00000489758 CD7P09564 240 aa12.01□□□□□ -0.49
CLIC4-203ENST00000489758 PYYP10082 97 aa12.01□□□□□ -0.49
CLIC4-203ENST00000489758 CDC34P49427 236 aaPredicted RBP12.01□□□□□ -0.49
CLIC4-203ENST00000489758 WFDC3Q8IUB2 231 aa12.01□□□□□ -0.49
CLIC4-203ENST00000489758 Q8N1Y9 231 aa12.01□□□□□ -0.49
CLIC4-203ENST00000489758 RAB24Q969Q5 203 aa12.01□□□□□ -0.49
CLIC4-203ENST00000489758 ACTR3CQ9C0K3 210 aaPredicted RBP12.01□□□□□ -0.49
CLIC4-203ENST00000489758 HRH4Q9H3N8 390 aa12.01□□□□□ -0.49
CLIC4-203ENST00000489758 C19orf73Q9NVV2 129 aa12.01□□□□□ -0.49
CLIC4-203ENST00000489758 UMAD1C9J7I0 102 aa12□□□□□ -0.49
CLIC4-203ENST00000489758 HMGB3O15347 200 aaKnown RBP12□□□□□ -0.49
CLIC4-203ENST00000489758 SNRPCP09234 159 aaKnown RBP12□□□□□ -0.49
CLIC4-203ENST00000489758 ATF4P18848 351 aaPredicted RBP12□□□□□ -0.49
CLIC4-203ENST00000489758 FHITP49789 147 aa12□□□□□ -0.49
CLIC4-203ENST00000489758 TAS2R45P59539 299 aa12□□□□□ -0.49
CLIC4-203ENST00000489758 KHDC3LQ587J8 217 aa12□□□□□ -0.49
CLIC4-203ENST00000489758 EIF5AL1Q6IS14 154 aaKnown RBP12□□□□□ -0.49
CLIC4-203ENST00000489758 FXYD5Q96DB9 178 aa12□□□□□ -0.49
CLIC4-203ENST00000489758 OR51M1Q9H341 326 aa12□□□□□ -0.49
CLIC4-203ENST00000489758 AURKAIP1Q9NWT8 199 aaPredicted RBP12□□□□□ -0.49
CLIC4-203ENST00000489758 ZNF586Q9NXT0 402 aa12□□□□□ -0.49
CLIC4-203ENST00000489758 NOTCH3Q9UM47 2321 aa11.99□□□□□ -0.49
CLIC4-203ENST00000489758 TRAV8-2A0A0B4J237 113 aa11.99□□□□□ -0.49
CLIC4-203ENST00000489758 PRB2P02812 416 aaPredicted RBP11.99□□□□□ -0.49
CLIC4-203ENST00000489758 STAG3L2P0CL84 134 aa11.99□□□□□ -0.49
CLIC4-203ENST00000489758 STAG3L3P0CL85 134 aa11.99□□□□□ -0.49
CLIC4-203ENST00000489758 HIST1H1EP10412 219 aaKnown RBP11.99□□□□□ -0.49
CLIC4-203ENST00000489758 MEOX2P50222 304 aa11.99□□□□□ -0.49
CLIC4-203ENST00000489758 CD81P60033 236 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms