RNA–Protein interactions for RNA: ENST00000489502.5

HLA-F-229, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 489 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-229ENST00000489502 DEFB131AP59861 70 aa10.7□□□□□ -0.7
HLA-F-229ENST00000489502 PXDC1Q5TGL8 231 aa10.7□□□□□ -0.7
HLA-F-229ENST00000489502 C10orf113Q5VZT2 155 aa10.7□□□□□ -0.7
HLA-F-229ENST00000489502 LINC00305Q7Z4B0 112 aa10.7□□□□□ -0.7
HLA-F-229ENST00000489502 TNFSF18Q9UNG2 199 aa10.7□□□□□ -0.7
HLA-F-229ENST00000489502 RFNGQ9Y644 331 aa10.7□□□□□ -0.7
HLA-F-229ENST00000489502 ARPC5O15511 151 aa10.69□□□□□ -0.7
HLA-F-229ENST00000489502 GALR1P47211 349 aa10.69□□□□□ -0.7
HLA-F-229ENST00000489502 Q6ZRG5 221 aa10.69□□□□□ -0.7
HLA-F-229ENST00000489502 SBSPONQ8IVN8 264 aa10.69□□□□□ -0.7
HLA-F-229ENST00000489502 ZNF709Q8N972 641 aa10.69□□□□□ -0.7
HLA-F-229ENST00000489502 INO80EQ8NBZ0 244 aaPredicted RBP10.69□□□□□ -0.7
HLA-F-229ENST00000489502 SOCS3O14543 225 aa10.68□□□□□ -0.7
HLA-F-229ENST00000489502 S100A7P31151 101 aa10.68□□□□□ -0.7
HLA-F-229ENST00000489502 PSMG4Q5JS54 123 aa10.68□□□□□ -0.7
HLA-F-229ENST00000489502 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.68□□□□□ -0.7
HLA-F-229ENST00000489502 OR1L4Q8NGR5 311 aa10.68□□□□□ -0.7
HLA-F-229ENST00000489502 SCGB1C1Q8TD33 95 aa10.68□□□□□ -0.7
HLA-F-229ENST00000489502 C17orf77Q96MU5 243 aa10.68□□□□□ -0.7
HLA-F-229ENST00000489502 PFDN5Q99471 154 aa10.68□□□□□ -0.7
HLA-F-229ENST00000489502 FAM110AQ9BQ89 295 aa10.68□□□□□ -0.7
HLA-F-229ENST00000489502 KCNIP2Q9NS61 270 aa10.68□□□□□ -0.7
HLA-F-229ENST00000489502 AGRNO00468 2067 aa10.67□□□□□ -0.7
HLA-F-229ENST00000489502 STAB2Q8WWQ8 2551 aa10.67□□□□□ -0.7
HLA-F-229ENST00000489502 ELOA3CA0A087WX78 387 aaPredicted RBP10.67□□□□□ -0.7
HLA-F-229ENST00000489502 TRAV5A0A0B4J249 113 aa10.67□□□□□ -0.7
HLA-F-229ENST00000489502 C17orf112F2Z3M2 114 aa10.67□□□□□ -0.7
HLA-F-229ENST00000489502 SNRPCP09234 159 aaKnown RBP10.67□□□□□ -0.7
HLA-F-229ENST00000489502 RPL35AP18077 110 aaKnown RBP10.67□□□□□ -0.7
HLA-F-229ENST00000489502 RPL7P18124 248 aaKnown RBP10.67□□□□□ -0.7
HLA-F-229ENST00000489502 ATF4P18848 351 aaPredicted RBP10.67□□□□□ -0.7
HLA-F-229ENST00000489502 SPATA31B1PQ5VZV4 182 aa10.67□□□□□ -0.7
HLA-F-229ENST00000489502 S100A7AQ86SG5 101 aa10.67□□□□□ -0.7
HLA-F-229ENST00000489502 GPR82Q96P67 336 aa10.67□□□□□ -0.7
HLA-F-229ENST00000489502 DNAJC4Q9NNZ3 241 aa10.67□□□□□ -0.7
HLA-F-229ENST00000489502 KNCNA6PVL3 124 aa10.66□□□□□ -0.7
HLA-F-229ENST00000489502 MRPS12O15235 138 aaKnown RBP10.66□□□□□ -0.7
HLA-F-229ENST00000489502 DEFB1P60022 68 aa10.66□□□□□ -0.7
HLA-F-229ENST00000489502 ZNF266Q14584 549 aa10.66□□□□□ -0.7
HLA-F-229ENST00000489502 HAGHQ16775 308 aa10.66□□□□□ -0.7
HLA-F-229ENST00000489502 FFAR4Q5NUL3 377 aa10.66□□□□□ -0.7
HLA-F-229ENST00000489502 LINC00322Q6ZN03 302 aaPredicted RBP10.66□□□□□ -0.7
HLA-F-229ENST00000489502 HSD17B11Q8NBQ5 300 aa10.66□□□□□ -0.7
HLA-F-229ENST00000489502 OR11H4Q8NGC9 324 aa10.66□□□□□ -0.7
HLA-F-229ENST00000489502 ST6GAL2Q96JF0 529 aa10.66□□□□□ -0.7
HLA-F-229ENST00000489502 PARD6GQ9BYG4 376 aaPredicted RBP10.66□□□□□ -0.7
HLA-F-229ENST00000489502 RETNQ9HD89 108 aa10.66□□□□□ -0.7
HLA-F-229ENST00000489502 NBEAL2Q6ZNJ1 2754 aa10.66□□□□□ -0.7
HLA-F-229ENST00000489502 LOC102724200A0A096LPH7 203 aaPredicted RBP10.65□□□□□ -0.7
HLA-F-229ENST00000489502 A0A1B0GVG6 124 aa10.65□□□□□ -0.7
HLA-F-229ENST00000489502 H3BTX0 84 aa10.65□□□□□ -0.7
HLA-F-229ENST00000489502 PSMB3P49720 205 aa10.65□□□□□ -0.7
HLA-F-229ENST00000489502 CMC4P56277 68 aaPredicted RBP10.65□□□□□ -0.7
HLA-F-229ENST00000489502 SNRPD3P62318 126 aaKnown RBP10.65□□□□□ -0.7
HLA-F-229ENST00000489502 IGFL4Q6B9Z1 124 aa10.65□□□□□ -0.7
HLA-F-229ENST00000489502 GATAD1Q8WUU5 269 aa10.65□□□□□ -0.7
HLA-F-229ENST00000489502 C16orf92Q96LL3 132 aa10.65□□□□□ -0.7
HLA-F-229ENST00000489502 MFFQ9GZY8 342 aa10.65□□□□□ -0.7
HLA-F-229ENST00000489502 A0A087X0K7 114 aa10.64□□□□□ -0.71
HLA-F-229ENST00000489502 EIF3GO75821 320 aaKnown RBP eCLIP10.64□□□□□ -0.71
HLA-F-229ENST00000489502 MEOX2P50222 304 aa10.64□□□□□ -0.71
HLA-F-229ENST00000489502 FAM78BQ5VT40 261 aa10.64□□□□□ -0.71
HLA-F-229ENST00000489502 RPL7L1Q6DKI1 246 aaKnown RBP10.64□□□□□ -0.71
HLA-F-229ENST00000489502 MIR17HGQ75NE6 70 aa10.64□□□□□ -0.71
HLA-F-229ENST00000489502 BPIFA4PQ86YQ2 179 aa10.64□□□□□ -0.71
HLA-F-229ENST00000489502 C20orf173Q96LM9 149 aa10.64□□□□□ -0.71
HLA-F-229ENST00000489502 LINC00052Q96N35 136 aa10.64□□□□□ -0.71
HLA-F-229ENST00000489502 SH3BGRL3Q9H299 93 aa10.64□□□□□ -0.71
HLA-F-229ENST00000489502 SEPSECSQ9HD40 501 aaKnown RBP10.64□□□□□ -0.71
HLA-F-229ENST00000489502 HUWE1Q7Z6Z7 4374 aaKnown RBP10.64□□□□□ -0.71
HLA-F-229ENST00000489502 TRAV8-2A0A0B4J237 113 aa10.63□□□□□ -0.71
HLA-F-229ENST00000489502 SLC17A3O00476 420 aa10.63□□□□□ -0.71
HLA-F-229ENST00000489502 ISLRO14498 428 aa10.63□□□□□ -0.71
HLA-F-229ENST00000489502 PRB4P10163 310 aaPredicted RBP10.63□□□□□ -0.71
HLA-F-229ENST00000489502 ATP6V0CP27449 155 aa10.63□□□□□ -0.71
HLA-F-229ENST00000489502 ID1P41134 155 aa10.63□□□□□ -0.71
HLA-F-229ENST00000489502 RAB2AP61019 212 aa10.63□□□□□ -0.71
HLA-F-229ENST00000489502 ACTL10Q5JWF8 245 aa10.63□□□□□ -0.71
HLA-F-229ENST00000489502 RNF182Q8N6D2 247 aa10.63□□□□□ -0.71
HLA-F-229ENST00000489502 SLC25A2Q9BXI2 301 aa10.63□□□□□ -0.71
HLA-F-229ENST00000489502 RNF24Q9Y225 148 aa10.63□□□□□ -0.71
HLA-F-229ENST00000489502 H3BQ15 152 aa10.62□□□□□ -0.71
HLA-F-229ENST00000489502 IGLC2P0DOY2 106 aa10.62□□□□□ -0.71
HLA-F-229ENST00000489502 PYYP10082 97 aa10.62□□□□□ -0.71
HLA-F-229ENST00000489502 HLA-DMBP28068 263 aa10.62□□□□□ -0.71
HLA-F-229ENST00000489502 GDF5OSQ5U4N7 250 aa10.62□□□□□ -0.71
HLA-F-229ENST00000489502 STHQ8IWL8 128 aa10.62□□□□□ -0.71
HLA-F-229ENST00000489502 TM2D3Q9BRN9 247 aa10.62□□□□□ -0.71
HLA-F-229ENST00000489502 TIMM9Q9Y5J7 89 aa10.62□□□□□ -0.71
HLA-F-229ENST00000489502 BORCS7-ASMTA0A0B4J1R7 106 aa10.61□□□□□ -0.71
HLA-F-229ENST00000489502 F6UB75 175 aa10.61□□□□□ -0.71
HLA-F-229ENST00000489502 CXCL2P19875 107 aa10.61□□□□□ -0.71
HLA-F-229ENST00000489502 CD300CQ08708 224 aa10.61□□□□□ -0.71
HLA-F-229ENST00000489502 ZNF345Q14585 488 aa10.61□□□□□ -0.71
HLA-F-229ENST00000489502 SAMD13Q5VXD3 122 aa10.61□□□□□ -0.71
HLA-F-229ENST00000489502 LCN15Q6UWW0 184 aa10.61□□□□□ -0.71
HLA-F-229ENST00000489502 TRPT1Q86TN4 253 aaKnown RBP10.61□□□□□ -0.71
HLA-F-229ENST00000489502 AKAP14Q86UN6 197 aa10.61□□□□□ -0.71
HLA-F-229ENST00000489502 TCTE3Q8IZS6 198 aa10.61□□□□□ -0.71
HLA-F-229ENST00000489502 KCNRGQ8N5I3 272 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms