RNA–Protein interactions for RNA: ENST00000489443.2

LMX1A-204, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

TSL 1 (best)

Gene LMX1A, Length 1,255 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-204ENST00000489443 ARV1Q9H2C2 271 aa11.56□□□□□ -0.56
LMX1A-204ENST00000489443 WDR83OSQ9Y284 106 aa11.56□□□□□ -0.56
LMX1A-204ENST00000489443 MPC2O95563 127 aa11.55□□□□□ -0.56
LMX1A-204ENST00000489443 LYL1P12980 280 aa11.55□□□□□ -0.56
LMX1A-204ENST00000489443 PSMB3P49720 205 aa11.55□□□□□ -0.56
LMX1A-204ENST00000489443 MEOX2P50222 304 aa11.55□□□□□ -0.56
LMX1A-204ENST00000489443 FGL1Q08830 312 aa11.55□□□□□ -0.56
LMX1A-204ENST00000489443 MIC13Q5XKP0 118 aa11.55□□□□□ -0.56
LMX1A-204ENST00000489443 OR5C1Q8NGR4 320 aa11.55□□□□□ -0.56
LMX1A-204ENST00000489443 C16orf92Q96LL3 132 aa11.55□□□□□ -0.56
LMX1A-204ENST00000489443 RNF126Q9BV68 326 aa11.55□□□□□ -0.56
LMX1A-204ENST00000489443 ISLRO14498 428 aa11.54□□□□□ -0.56
LMX1A-204ENST00000489443 SOCS3O14543 225 aa11.54□□□□□ -0.56
LMX1A-204ENST00000489443 PET100P0DJ07 73 aa11.54□□□□□ -0.56
LMX1A-204ENST00000489443 ATF4P18848 351 aaPredicted RBP11.54□□□□□ -0.56
LMX1A-204ENST00000489443 CXCL3P19876 107 aa11.54□□□□□ -0.56
LMX1A-204ENST00000489443 FGF7P21781 194 aa11.54□□□□□ -0.56
LMX1A-204ENST00000489443 DEFB1P60022 68 aa11.54□□□□□ -0.56
LMX1A-204ENST00000489443 Q6ZRG5 221 aa11.54□□□□□ -0.56
LMX1A-204ENST00000489443 LINC00305Q7Z4B0 112 aa11.54□□□□□ -0.56
LMX1A-204ENST00000489443 C17orf77Q96MU5 243 aa11.54□□□□□ -0.56
LMX1A-204ENST00000489443 MED28Q9H204 178 aa11.54□□□□□ -0.56
LMX1A-204ENST00000489443 CSMD3Q7Z407 3707 aa11.53□□□□□ -0.56
LMX1A-204ENST00000489443 SPP1P10451 314 aa11.53□□□□□ -0.56
LMX1A-204ENST00000489443 RPL7P18124 248 aaKnown RBP11.53□□□□□ -0.56
LMX1A-204ENST00000489443 CLINT1Q14677 625 aa11.53□□□□□ -0.56
LMX1A-204ENST00000489443 SAMD13Q5VXD3 122 aa11.53□□□□□ -0.56
LMX1A-204ENST00000489443 C10orf113Q5VZT2 155 aa11.53□□□□□ -0.56
LMX1A-204ENST00000489443 ZFAND6Q6FIF0 208 aa11.53□□□□□ -0.56
LMX1A-204ENST00000489443 MORN3Q6PF18 240 aaPredicted RBP11.53□□□□□ -0.56
LMX1A-204ENST00000489443 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.53□□□□□ -0.56
LMX1A-204ENST00000489443 TMEM37Q8WXS4 190 aa11.53□□□□□ -0.56
LMX1A-204ENST00000489443 DNAJC4Q9NNZ3 241 aa11.53□□□□□ -0.56
LMX1A-204ENST00000489443 ELOA3CA0A087WX78 387 aaPredicted RBP11.52□□□□□ -0.57
LMX1A-204ENST00000489443 H3BMM0 161 aa11.52□□□□□ -0.57
LMX1A-204ENST00000489443 IGKV3-20P01619 116 aa11.52□□□□□ -0.57
LMX1A-204ENST00000489443 RPL29P47914 159 aaKnown RBP11.52□□□□□ -0.57
LMX1A-204ENST00000489443 PRR20EP86478 221 aa11.52□□□□□ -0.57
LMX1A-204ENST00000489443 PRR20CP86479 221 aa11.52□□□□□ -0.57
LMX1A-204ENST00000489443 PRR20DP86480 221 aa11.52□□□□□ -0.57
LMX1A-204ENST00000489443 PRR20BP86481 221 aa11.52□□□□□ -0.57
LMX1A-204ENST00000489443 PRR20AP86496 221 aa11.52□□□□□ -0.57
LMX1A-204ENST00000489443 OPCMLQ14982 345 aa11.52□□□□□ -0.57
LMX1A-204ENST00000489443 FCN2Q15485 313 aa11.52□□□□□ -0.57
LMX1A-204ENST00000489443 RGS21Q2M5E4 152 aa11.52□□□□□ -0.57
LMX1A-204ENST00000489443 GDF5OSQ5U4N7 250 aa11.52□□□□□ -0.57
LMX1A-204ENST00000489443 IGFL4Q6B9Z1 124 aa11.52□□□□□ -0.57
LMX1A-204ENST00000489443 THAP6Q8TBB0 222 aa11.52□□□□□ -0.57
LMX1A-204ENST00000489443 GATAD1Q8WUU5 269 aa11.52□□□□□ -0.57
LMX1A-204ENST00000489443 C20orf173Q96LM9 149 aa11.52□□□□□ -0.57
LMX1A-204ENST00000489443 RARRES2Q99969 163 aa11.52□□□□□ -0.57
LMX1A-204ENST00000489443 SLC39A9Q9NUM3 307 aa11.52□□□□□ -0.57
LMX1A-204ENST00000489443 MBD2Q9UBB5 411 aa11.52□□□□□ -0.57
LMX1A-204ENST00000489443 RNF24Q9Y225 148 aa11.52□□□□□ -0.57
LMX1A-204ENST00000489443 A0A0J9YWU9 116 aa11.51□□□□□ -0.57
LMX1A-204ENST00000489443 MPDU1O75352 247 aa11.51□□□□□ -0.57
LMX1A-204ENST00000489443 GIG44P09565 113 aaPredicted RBP11.51□□□□□ -0.57
LMX1A-204ENST00000489443 HLA-DRB4P13762 266 aa11.51□□□□□ -0.57
LMX1A-204ENST00000489443 B2MP61769 119 aa11.51□□□□□ -0.57
LMX1A-204ENST00000489443 CASC10Q5T4H9 136 aa11.51□□□□□ -0.57
LMX1A-204ENST00000489443 OR1L4Q8NGR5 311 aa11.51□□□□□ -0.57
LMX1A-204ENST00000489443 OR11H2Q8NH07 326 aa11.51□□□□□ -0.57
LMX1A-204ENST00000489443 LRRC20Q8TCA0 184 aa11.51□□□□□ -0.57
LMX1A-204ENST00000489443 SAV1Q9H4B6 383 aaPredicted RBP11.51□□□□□ -0.57
LMX1A-204ENST00000489443 RPRMQ9NS64 109 aa11.51□□□□□ -0.57
LMX1A-204ENST00000489443 PXMP4Q9Y6I8 212 aa11.51□□□□□ -0.57
LMX1A-204ENST00000489443 HLA-DRB4X5D2U9 266 aa11.51□□□□□ -0.57
LMX1A-204ENST00000489443 F6UB75 175 aa11.5□□□□□ -0.57
LMX1A-204ENST00000489443 SNRPCP09234 159 aaKnown RBP11.5□□□□□ -0.57
LMX1A-204ENST00000489443 C4BPBP20851 252 aa11.5□□□□□ -0.57
LMX1A-204ENST00000489443 RPL12P30050 165 aaKnown RBP11.5□□□□□ -0.57
LMX1A-204ENST00000489443 NUTF2P61970 127 aaKnown RBP11.5□□□□□ -0.57
LMX1A-204ENST00000489443 MORN5Q5VZ52 161 aa11.5□□□□□ -0.57
LMX1A-204ENST00000489443 EBLN2Q6P2I7 272 aa11.5□□□□□ -0.57
LMX1A-204ENST00000489443 FOXI2Q6ZQN5 318 aa11.5□□□□□ -0.57
LMX1A-204ENST00000489443 RNF182Q8N6D2 247 aa11.5□□□□□ -0.57
LMX1A-204ENST00000489443 OR11H7Q8NGC8 314 aa11.5□□□□□ -0.57
LMX1A-204ENST00000489443 OR4B1Q8NGF8 309 aa11.5□□□□□ -0.57
LMX1A-204ENST00000489443 CHAC2Q8WUX2 184 aa11.5□□□□□ -0.57
LMX1A-204ENST00000489443 NPCDR1Q9BY65 106 aa11.5□□□□□ -0.57
LMX1A-204ENST00000489443 CLEC5AQ9NY25 188 aa11.5□□□□□ -0.57
LMX1A-204ENST00000489443 HSPB11Q9Y547 144 aa11.5□□□□□ -0.57
LMX1A-204ENST00000489443 TRAV8-2A0A0B4J237 113 aa11.49□□□□□ -0.57
LMX1A-204ENST00000489443 TRAV5A0A0B4J249 113 aa11.49□□□□□ -0.57
LMX1A-204ENST00000489443 TMEM41BQ5BJD5 291 aa11.49□□□□□ -0.57
LMX1A-204ENST00000489443 BPIFA4PQ86YQ2 179 aa11.49□□□□□ -0.57
LMX1A-204ENST00000489443 ZNF709Q8N972 641 aa11.49□□□□□ -0.57
LMX1A-204ENST00000489443 IL17DQ8TAD2 202 aa11.49□□□□□ -0.57
LMX1A-204ENST00000489443 PFDN5Q99471 154 aa11.49□□□□□ -0.57
LMX1A-204ENST00000489443 SMIM3Q9BZL3 60 aa11.49□□□□□ -0.57
LMX1A-204ENST00000489443 XCL2Q9UBD3 114 aa11.49□□□□□ -0.57
LMX1A-204ENST00000489443 A0A087X0K7 114 aa11.48□□□□□ -0.57
LMX1A-204ENST00000489443 MRPS12O15235 138 aaKnown RBP11.48□□□□□ -0.57
LMX1A-204ENST00000489443 FAM78BQ5VT40 261 aa11.48□□□□□ -0.57
LMX1A-204ENST00000489443 A0A0J9YX75 114 aa11.47□□□□□ -0.57
LMX1A-204ENST00000489443 H3BTX0 84 aa11.47□□□□□ -0.57
LMX1A-204ENST00000489443 FXYD7P58549 80 aa11.47□□□□□ -0.57
LMX1A-204ENST00000489443 GCSAMLQ5JQS6 135 aa11.47□□□□□ -0.57
LMX1A-204ENST00000489443 SPATA31B1PQ5VZV4 182 aa11.47□□□□□ -0.57
LMX1A-204ENST00000489443 ZNF738Q8NE65 137 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms