RNA–Protein interactions for RNA: ENST00000489212.2

LIME1-207, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 5

Gene LIME1, Length 559 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-207ENST00000489212 OR5G3P0C626 314 aa15.35■□□□□ 0.05
LIME1-207ENST00000489212 RAP2BP61225 183 aa15.35■□□□□ 0.05
LIME1-207ENST00000489212 FOXI2Q6ZQN5 318 aa15.35■□□□□ 0.05
LIME1-207ENST00000489212 C16orf92Q96LL3 132 aa15.35■□□□□ 0.05
LIME1-207ENST00000489212 MGST2Q99735 147 aa15.35■□□□□ 0.05
LIME1-207ENST00000489212 ARL6Q9H0F7 186 aa15.35■□□□□ 0.05
LIME1-207ENST00000489212 F6UB75 175 aa15.34■□□□□ 0.05
LIME1-207ENST00000489212 SIX6O95475 246 aa15.34■□□□□ 0.05
LIME1-207ENST00000489212 IGKV3-20P01619 116 aa15.34■□□□□ 0.05
LIME1-207ENST00000489212 RBMY1A1P0DJD3 496 aaKnown RBP15.34■□□□□ 0.05
LIME1-207ENST00000489212 RBMY1CP0DJD4 496 aa15.34■□□□□ 0.05
LIME1-207ENST00000489212 S100A7P31151 101 aa15.34■□□□□ 0.05
LIME1-207ENST00000489212 MEOX2P50222 304 aa15.34■□□□□ 0.05
LIME1-207ENST00000489212 NANOS2P60321 138 aaKnown RBP15.34■□□□□ 0.05
LIME1-207ENST00000489212 RBMY1FQ15415 496 aaKnown RBP15.34■□□□□ 0.05
LIME1-207ENST00000489212 CEMP1Q6PRD7 247 aaPredicted RBP15.34■□□□□ 0.05
LIME1-207ENST00000489212 GPR82Q96P67 336 aa15.34■□□□□ 0.05
LIME1-207ENST00000489212 GPN1Q9HCN4 374 aaPredicted RBP15.34■□□□□ 0.05
LIME1-207ENST00000489212 LYRM2Q9NU23 88 aaPredicted RBP15.34■□□□□ 0.05
LIME1-207ENST00000489212 XCL2Q9UBD3 114 aa15.34■□□□□ 0.05
LIME1-207ENST00000489212 IGHV4-28A0A0C4DH34 117 aa15.33■□□□□ 0.04
LIME1-207ENST00000489212 IGSF23A1L1A6 192 aa15.33■□□□□ 0.04
LIME1-207ENST00000489212 NUPR2A6NF83 97 aa15.33■□□□□ 0.04
LIME1-207ENST00000489212 INMT-MINDY4F8WBC2 141 aa15.33■□□□□ 0.04
LIME1-207ENST00000489212 PVALBP20472 110 aaPredicted RBP15.33■□□□□ 0.04
LIME1-207ENST00000489212 SAMD13Q5VXD3 122 aa15.33■□□□□ 0.04
LIME1-207ENST00000489212 IGFL4Q6B9Z1 124 aa15.33■□□□□ 0.04
LIME1-207ENST00000489212 ZNF546Q86UE3 836 aa15.33■□□□□ 0.04
LIME1-207ENST00000489212 TRAV8-2A0A0B4J237 113 aa15.32■□□□□ 0.04
LIME1-207ENST00000489212 GOSR2O14653 212 aa15.32■□□□□ 0.04
LIME1-207ENST00000489212 JTBO76095 146 aa15.32■□□□□ 0.04
LIME1-207ENST00000489212 FXYD7P58549 80 aa15.32■□□□□ 0.04
LIME1-207ENST00000489212 NUTF2P61970 127 aaKnown RBP15.32■□□□□ 0.04
LIME1-207ENST00000489212 TMEM252Q8N6L7 170 aa15.32■□□□□ 0.04
LIME1-207ENST00000489212 C11orf45Q8TAV5 145 aa15.32■□□□□ 0.04
LIME1-207ENST00000489212 ARV1Q9H2C2 271 aa15.32■□□□□ 0.04
LIME1-207ENST00000489212 MIFP14174 115 aa15.31■□□□□ 0.04
LIME1-207ENST00000489212 RPL7P18124 248 aaKnown RBP15.31■□□□□ 0.04
LIME1-207ENST00000489212 SULT1A1P50225 295 aa15.31■□□□□ 0.04
LIME1-207ENST00000489212 ZNF709Q8N972 641 aa15.31■□□□□ 0.04
LIME1-207ENST00000489212 OR4B1Q8NGF8 309 aa15.31■□□□□ 0.04
LIME1-207ENST00000489212 PHLDA1Q8WV24 401 aaPredicted RBP15.31■□□□□ 0.04
LIME1-207ENST00000489212 CLUHP3Q96NS8 147 aa15.31■□□□□ 0.04
LIME1-207ENST00000489212 MARVELD1Q9BSK0 173 aa15.31■□□□□ 0.04
LIME1-207ENST00000489212 C1QTNF4Q9BXJ3 329 aa15.31■□□□□ 0.04
LIME1-207ENST00000489212 A0A0J9YX75 114 aa15.3■□□□□ 0.04
LIME1-207ENST00000489212 PRAF2O60831 178 aa15.3■□□□□ 0.04
LIME1-207ENST00000489212 FGL1Q08830 312 aa15.3■□□□□ 0.04
LIME1-207ENST00000489212 VWC2Q2TAL6 325 aa15.3■□□□□ 0.04
LIME1-207ENST00000489212 PXDC1Q5TGL8 231 aa15.3■□□□□ 0.04
LIME1-207ENST00000489212 FAM78BQ5VT40 261 aa15.3■□□□□ 0.04
LIME1-207ENST00000489212 EBLN2Q6P2I7 272 aa15.3■□□□□ 0.04
LIME1-207ENST00000489212 RNF182Q8N6D2 247 aa15.3■□□□□ 0.04
LIME1-207ENST00000489212 TMEM37Q8WXS4 190 aa15.3■□□□□ 0.04
LIME1-207ENST00000489212 RPRMQ9NS64 109 aa15.3■□□□□ 0.04
LIME1-207ENST00000489212 UQCC1Q9NVA1 299 aa15.3■□□□□ 0.04
LIME1-207ENST00000489212 WDR83OSQ9Y284 106 aa15.3■□□□□ 0.04
LIME1-207ENST00000489212 ELOA3CA0A087WX78 387 aaPredicted RBP15.29■□□□□ 0.04
LIME1-207ENST00000489212 MRPS12O15235 138 aaKnown RBP15.29■□□□□ 0.04
LIME1-207ENST00000489212 CAMLGP49069 296 aa15.29■□□□□ 0.04
LIME1-207ENST00000489212 SPATA31B1PQ5VZV4 182 aa15.29■□□□□ 0.04
LIME1-207ENST00000489212 SLC35B3Q9H1N7 401 aa15.29■□□□□ 0.04
LIME1-207ENST00000489212 A0A087X0K7 114 aa15.28■□□□□ 0.04
LIME1-207ENST00000489212 S100A11P31949 105 aa15.28■□□□□ 0.04
LIME1-207ENST00000489212 DEFA1P59665 94 aa15.28■□□□□ 0.04
LIME1-207ENST00000489212 DEFA3P59666 94 aa15.28■□□□□ 0.04
LIME1-207ENST00000489212 MORN5Q5VZ52 161 aa15.28■□□□□ 0.04
LIME1-207ENST00000489212 MIC13Q5XKP0 118 aa15.28■□□□□ 0.04
LIME1-207ENST00000489212 LINC00305Q7Z4B0 112 aa15.28■□□□□ 0.04
LIME1-207ENST00000489212 NMES1Q9C002 83 aa15.28■□□□□ 0.04
LIME1-207ENST00000489212 UBE2L5PA0A1B0GUS4 154 aa15.27■□□□□ 0.04
LIME1-207ENST00000489212 A8MTW9 85 aa15.27■□□□□ 0.04
LIME1-207ENST00000489212 HLA-DMBP28068 263 aa15.27■□□□□ 0.04
LIME1-207ENST00000489212 PRR20EP86478 221 aa15.27■□□□□ 0.04
LIME1-207ENST00000489212 PRR20CP86479 221 aa15.27■□□□□ 0.04
LIME1-207ENST00000489212 PRR20DP86480 221 aa15.27■□□□□ 0.04
LIME1-207ENST00000489212 PRR20BP86481 221 aa15.27■□□□□ 0.04
LIME1-207ENST00000489212 PRR20AP86496 221 aa15.27■□□□□ 0.04
LIME1-207ENST00000489212 PSG9Q00887 426 aa15.27■□□□□ 0.04
LIME1-207ENST00000489212 ZNF705AQ6ZN79 300 aaPredicted RBP15.27■□□□□ 0.04
LIME1-207ENST00000489212 S100A7AQ86SG5 101 aa15.27■□□□□ 0.04
LIME1-207ENST00000489212 STX12Q86Y82 276 aa15.27■□□□□ 0.04
LIME1-207ENST00000489212 MFFQ9GZY8 342 aa15.27■□□□□ 0.04
LIME1-207ENST00000489212 OR5AC2Q9NZP5 309 aa15.27■□□□□ 0.04
LIME1-207ENST00000489212 H0YIZ8 118 aa15.26■□□□□ 0.03
LIME1-207ENST00000489212 COX7A2P2O60397 106 aa15.26■□□□□ 0.03
LIME1-207ENST00000489212 H2BFSP57053 126 aa15.26■□□□□ 0.03
LIME1-207ENST00000489212 AMTNQ6UX39 209 aa15.26■□□□□ 0.03
LIME1-207ENST00000489212 HRH4Q9H3N8 390 aa15.26■□□□□ 0.03
LIME1-207ENST00000489212 KLK5Q9Y337 293 aaPredicted RBP15.26■□□□□ 0.03
LIME1-207ENST00000489212 SNRPCP09234 159 aaKnown RBP15.25■□□□□ 0.03
LIME1-207ENST00000489212 ZNF705DP0CH99 300 aaPredicted RBP15.25■□□□□ 0.03
LIME1-207ENST00000489212 ZNF705BP0CI00 300 aaPredicted RBP15.25■□□□□ 0.03
LIME1-207ENST00000489212 HBG1P69891 147 aa15.25■□□□□ 0.03
LIME1-207ENST00000489212 HBG2P69892 147 aa15.25■□□□□ 0.03
LIME1-207ENST00000489212 NHLH2Q02577 135 aa15.25■□□□□ 0.03
LIME1-207ENST00000489212 RAB31Q13636 194 aa15.25■□□□□ 0.03
LIME1-207ENST00000489212 LRRC37A5PQ49AS3 106 aa15.25■□□□□ 0.03
LIME1-207ENST00000489212 LINC00476Q8WZB0 136 aa15.25■□□□□ 0.03
LIME1-207ENST00000489212 ZNF705FA8MVS1 300 aaPredicted RBP15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms