RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 EBLN2Q6P2I7 272 aa10.47□□□□□ -0.73
BRCA1-218ENST00000489037 Q6ZRG5 221 aa10.47□□□□□ -0.73
BRCA1-218ENST00000489037 OR11H2Q8NH07 326 aa10.47□□□□□ -0.73
BRCA1-218ENST00000489037 SCRT1Q9BWW7 348 aa10.47□□□□□ -0.73
BRCA1-218ENST00000489037 C1QTNF4Q9BXJ3 329 aa10.47□□□□□ -0.73
BRCA1-218ENST00000489037 IGSF23A1L1A6 192 aa10.46□□□□□ -0.73
BRCA1-218ENST00000489037 COX7A2P2O60397 106 aa10.46□□□□□ -0.73
BRCA1-218ENST00000489037 BAXQ07812 192 aa10.46□□□□□ -0.73
BRCA1-218ENST00000489037 FGL1Q08830 312 aa10.46□□□□□ -0.73
BRCA1-218ENST00000489037 LRRC37A5PQ49AS3 106 aa10.46□□□□□ -0.73
BRCA1-218ENST00000489037 SPATA31B1PQ5VZV4 182 aa10.46□□□□□ -0.73
BRCA1-218ENST00000489037 ARV1Q9H2C2 271 aa10.46□□□□□ -0.73
BRCA1-218ENST00000489037 RPRMQ9NS64 109 aa10.46□□□□□ -0.73
BRCA1-218ENST00000489037 ELOA3CA0A087WX78 387 aaPredicted RBP10.45□□□□□ -0.74
BRCA1-218ENST00000489037 H3BMM0 161 aa10.45□□□□□ -0.74
BRCA1-218ENST00000489037 PET100P0DJ07 73 aa10.45□□□□□ -0.74
BRCA1-218ENST00000489037 HLA-DRB4P13762 266 aa10.45□□□□□ -0.74
BRCA1-218ENST00000489037 FOXI2Q6ZQN5 318 aa10.45□□□□□ -0.74
BRCA1-218ENST00000489037 LRRC20Q8TCA0 184 aa10.45□□□□□ -0.74
BRCA1-218ENST00000489037 UHRF2Q96PU4 802 aa10.45□□□□□ -0.74
BRCA1-218ENST00000489037 MGST2Q99735 147 aa10.45□□□□□ -0.74
BRCA1-218ENST00000489037 SAV1Q9H4B6 383 aaPredicted RBP10.45□□□□□ -0.74
BRCA1-218ENST00000489037 WDR83OSQ9Y284 106 aa10.45□□□□□ -0.74
BRCA1-218ENST00000489037 HLA-DRB4X5D2U9 266 aa10.45□□□□□ -0.74
BRCA1-218ENST00000489037 UBE2L5PA0A1B0GUS4 154 aa10.44□□□□□ -0.74
BRCA1-218ENST00000489037 SOCS3O14543 225 aa10.44□□□□□ -0.74
BRCA1-218ENST00000489037 PTTG1O95997 202 aa10.44□□□□□ -0.74
BRCA1-218ENST00000489037 VWC2Q2TAL6 325 aa10.44□□□□□ -0.74
BRCA1-218ENST00000489037 C10orf113Q5VZT2 155 aa10.44□□□□□ -0.74
BRCA1-218ENST00000489037 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.44□□□□□ -0.74
BRCA1-218ENST00000489037 LINC00305Q7Z4B0 112 aa10.44□□□□□ -0.74
BRCA1-218ENST00000489037 OR4B1Q8NGF8 309 aa10.44□□□□□ -0.74
BRCA1-218ENST00000489037 OR1L4Q8NGR5 311 aa10.44□□□□□ -0.74
BRCA1-218ENST00000489037 CXorf65A6NEN9 183 aa10.43□□□□□ -0.74
BRCA1-218ENST00000489037 MPDU1O75352 247 aa10.43□□□□□ -0.74
BRCA1-218ENST00000489037 IGKV3-20P01619 116 aa10.43□□□□□ -0.74
BRCA1-218ENST00000489037 FGF7P21781 194 aa10.43□□□□□ -0.74
BRCA1-218ENST00000489037 PATE2Q6UY27 113 aa10.43□□□□□ -0.74
BRCA1-218ENST00000489037 PPP1R1CQ8WVI7 109 aa10.43□□□□□ -0.74
BRCA1-218ENST00000489037 PFDN5Q99471 154 aa10.43□□□□□ -0.74
BRCA1-218ENST00000489037 DNAJC4Q9NNZ3 241 aa10.43□□□□□ -0.74
BRCA1-218ENST00000489037 C4BPBP20851 252 aa10.42□□□□□ -0.74
BRCA1-218ENST00000489037 RPL29P47914 159 aaKnown RBP10.42□□□□□ -0.74
BRCA1-218ENST00000489037 H2BFSP57053 126 aa10.42□□□□□ -0.74
BRCA1-218ENST00000489037 EWSR1Q01844 656 aaKnown RBP eCLIP10.42□□□□□ -0.74
BRCA1-218ENST00000489037 NHLH2Q02577 135 aa10.42□□□□□ -0.74
BRCA1-218ENST00000489037 PMS2P11Q13670 270 aa10.42□□□□□ -0.74
BRCA1-218ENST00000489037 MIC13Q5XKP0 118 aa10.42□□□□□ -0.74
BRCA1-218ENST00000489037 BPIFA4PQ86YQ2 179 aa10.42□□□□□ -0.74
BRCA1-218ENST00000489037 OR5C1Q8NGR4 320 aa10.42□□□□□ -0.74
BRCA1-218ENST00000489037 C11orf68Q9H3H3 251 aaKnown RBP10.42□□□□□ -0.74
BRCA1-218ENST00000489037 CLEC5AQ9NY25 188 aa10.42□□□□□ -0.74
BRCA1-218ENST00000489037 OR5AC2Q9NZP5 309 aa10.42□□□□□ -0.74
BRCA1-218ENST00000489037 XCL2Q9UBD3 114 aa10.42□□□□□ -0.74
BRCA1-218ENST00000489037 A0A087X0K7 114 aa10.41□□□□□ -0.74
BRCA1-218ENST00000489037 DUSP14O95147 198 aaKnown RBP10.41□□□□□ -0.74
BRCA1-218ENST00000489037 GIG44P09565 113 aaPredicted RBP10.41□□□□□ -0.74
BRCA1-218ENST00000489037 MIFP14174 115 aa10.41□□□□□ -0.74
BRCA1-218ENST00000489037 B2MP61769 119 aa10.41□□□□□ -0.74
BRCA1-218ENST00000489037 GDF5OSQ5U4N7 250 aa10.41□□□□□ -0.74
BRCA1-218ENST00000489037 ZNF709Q8N972 641 aa10.41□□□□□ -0.74
BRCA1-218ENST00000489037 CHAC2Q8WUX2 184 aa10.41□□□□□ -0.74
BRCA1-218ENST00000489037 CLUHP3Q96NS8 147 aa10.41□□□□□ -0.74
BRCA1-218ENST00000489037 MFFQ9GZY8 342 aa10.41□□□□□ -0.74
BRCA1-218ENST00000489037 SLC39A9Q9NUM3 307 aa10.41□□□□□ -0.74
BRCA1-218ENST00000489037 A0A0J9YX75 114 aa10.4□□□□□ -0.74
BRCA1-218ENST00000489037 NUPR2A6NF83 97 aa10.4□□□□□ -0.74
BRCA1-218ENST00000489037 MPC2O95563 127 aa10.4□□□□□ -0.74
BRCA1-218ENST00000489037 CXCL2P19875 107 aa10.4□□□□□ -0.74
BRCA1-218ENST00000489037 DEFB1P60022 68 aa10.4□□□□□ -0.74
BRCA1-218ENST00000489037 PRR20EP86478 221 aa10.4□□□□□ -0.74
BRCA1-218ENST00000489037 PRR20CP86479 221 aa10.4□□□□□ -0.74
BRCA1-218ENST00000489037 PRR20DP86480 221 aa10.4□□□□□ -0.74
BRCA1-218ENST00000489037 PRR20BP86481 221 aa10.4□□□□□ -0.74
BRCA1-218ENST00000489037 PRR20AP86496 221 aa10.4□□□□□ -0.74
BRCA1-218ENST00000489037 PSG9Q00887 426 aa10.4□□□□□ -0.74
BRCA1-218ENST00000489037 OPCMLQ14982 345 aa10.4□□□□□ -0.74
BRCA1-218ENST00000489037 FAM78BQ5VT40 261 aa10.4□□□□□ -0.74
BRCA1-218ENST00000489037 ZNF738Q8NE65 137 aa10.4□□□□□ -0.74
BRCA1-218ENST00000489037 C11orf45Q8TAV5 145 aa10.4□□□□□ -0.74
BRCA1-218ENST00000489037 TMEM37Q8WXS4 190 aa10.4□□□□□ -0.74
BRCA1-218ENST00000489037 C20orf173Q96LM9 149 aa10.4□□□□□ -0.74
BRCA1-218ENST00000489037 KCNIP2Q9NS61 270 aa10.4□□□□□ -0.74
BRCA1-218ENST00000489037 ALG5Q9Y673 324 aa10.4□□□□□ -0.74
BRCA1-218ENST00000489037 PXMP4Q9Y6I8 212 aa10.4□□□□□ -0.74
BRCA1-218ENST00000489037 ZNF705EA8MWA4 302 aaPredicted RBP10.39□□□□□ -0.75
BRCA1-218ENST00000489037 F6UB75 175 aa10.39□□□□□ -0.75
BRCA1-218ENST00000489037 H0YIZ8 118 aa10.39□□□□□ -0.75
BRCA1-218ENST00000489037 JTBO76095 146 aa10.39□□□□□ -0.75
BRCA1-218ENST00000489037 FXYD7P58549 80 aa10.39□□□□□ -0.75
BRCA1-218ENST00000489037 CLINT1Q14677 625 aa10.39□□□□□ -0.75
BRCA1-218ENST00000489037 IGFL4Q6B9Z1 124 aa10.39□□□□□ -0.75
BRCA1-218ENST00000489037 LCN15Q6UWW0 184 aa10.39□□□□□ -0.75
BRCA1-218ENST00000489037 SLC50A1Q9BRV3 221 aa10.39□□□□□ -0.75
BRCA1-218ENST00000489037 MED28Q9H204 178 aa10.39□□□□□ -0.75
BRCA1-218ENST00000489037 KLK5Q9Y337 293 aaPredicted RBP10.39□□□□□ -0.75
BRCA1-218ENST00000489037 C17orf112F2Z3M2 114 aa10.38□□□□□ -0.75
BRCA1-218ENST00000489037 DEFB4AO15263 64 aa10.38□□□□□ -0.75
BRCA1-218ENST00000489037 PSG3Q16557 428 aa10.38□□□□□ -0.75
BRCA1-218ENST00000489037 RNF182Q8N6D2 247 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms