RNA–Protein interactions for RNA: ENST00000489032.5

TRAPPC12-221, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-221ENST00000489032 SYNGR2O43760 224 aa6.12□□□□□ -1.43
TRAPPC12-221ENST00000489032 SCGB2A1O75556 95 aa6.12□□□□□ -1.43
TRAPPC12-221ENST00000489032 DFFBO76075 338 aa6.12□□□□□ -1.43
TRAPPC12-221ENST00000489032 IFNA10P01566 189 aa6.12□□□□□ -1.43
TRAPPC12-221ENST00000489032 NMBP08949 121 aa6.12□□□□□ -1.43
TRAPPC12-221ENST00000489032 ATP5IP56385 69 aaPredicted RBP6.12□□□□□ -1.43
TRAPPC12-221ENST00000489032 RAB11AP62491 216 aa6.12□□□□□ -1.43
TRAPPC12-221ENST00000489032 EWSR1Q01844 656 aaKnown RBP eCLIP6.12□□□□□ -1.43
TRAPPC12-221ENST00000489032 TNFRSF9Q07011 255 aa6.12□□□□□ -1.43
TRAPPC12-221ENST00000489032 GAGE2BQ13066 116 aa6.12□□□□□ -1.43
TRAPPC12-221ENST00000489032 GAGE2EQ4V326 116 aa6.12□□□□□ -1.43
TRAPPC12-221ENST00000489032 GAGE2AQ6NT46 116 aa6.12□□□□□ -1.43
TRAPPC12-221ENST00000489032 GBGT1Q8N5D6 347 aa6.12□□□□□ -1.43
TRAPPC12-221ENST00000489032 TMEM252Q8N6L7 170 aa6.12□□□□□ -1.43
TRAPPC12-221ENST00000489032 WFDC9Q8NEX5 89 aa6.12□□□□□ -1.43
TRAPPC12-221ENST00000489032 SLC24A4Q8NFF2 622 aa6.12□□□□□ -1.43
TRAPPC12-221ENST00000489032 DTD1Q8TEA8 209 aa6.12□□□□□ -1.43
TRAPPC12-221ENST00000489032 PINX1Q96BK5 328 aaKnown RBP6.12□□□□□ -1.43
TRAPPC12-221ENST00000489032 SMIM8Q96KF7 97 aa6.12□□□□□ -1.43
TRAPPC12-221ENST00000489032 CIB3Q96Q77 187 aaPredicted RBP6.12□□□□□ -1.43
TRAPPC12-221ENST00000489032 MAGT1Q9H0U3 335 aa6.12□□□□□ -1.43
TRAPPC12-221ENST00000489032 CSTL1Q9H114 145 aa6.12□□□□□ -1.43
TRAPPC12-221ENST00000489032 RBKSQ9H477 322 aa6.12□□□□□ -1.43
TRAPPC12-221ENST00000489032 C11orf1Q9H5F2 150 aa6.12□□□□□ -1.43
TRAPPC12-221ENST00000489032 GAGE2DQ9UEU5 116 aa6.12□□□□□ -1.43
TRAPPC12-221ENST00000489032 NOTCH3Q9UM47 2321 aa6.12□□□□□ -1.43
TRAPPC12-221ENST00000489032 OVOL1O14753 267 aa6.11□□□□□ -1.43
TRAPPC12-221ENST00000489032 GGCTO75223 188 aaKnown RBP6.11□□□□□ -1.43
TRAPPC12-221ENST00000489032 IGHV3-23P01764 117 aa6.11□□□□□ -1.43
TRAPPC12-221ENST00000489032 SEC11BP0C7V7 166 aa6.11□□□□□ -1.43
TRAPPC12-221ENST00000489032 NPY1RP25929 384 aa6.11□□□□□ -1.43
TRAPPC12-221ENST00000489032 OPRK1P41145 380 aa6.11□□□□□ -1.43
TRAPPC12-221ENST00000489032 RAB5CP51148 216 aa6.11□□□□□ -1.43
TRAPPC12-221ENST00000489032 HBG1P69891 147 aa6.11□□□□□ -1.43
TRAPPC12-221ENST00000489032 HBG2P69892 147 aa6.11□□□□□ -1.43
TRAPPC12-221ENST00000489032 Q56UQ5 140 aa6.11□□□□□ -1.43
TRAPPC12-221ENST00000489032 RPL7L1Q6DKI1 246 aaKnown RBP6.11□□□□□ -1.43
TRAPPC12-221ENST00000489032 ETFRF1Q6IPR1 90 aa6.11□□□□□ -1.43
TRAPPC12-221ENST00000489032 C16orf54Q6UWD8 224 aa6.11□□□□□ -1.43
TRAPPC12-221ENST00000489032 CLEC19AQ6UXS0 136 aa6.11□□□□□ -1.43
TRAPPC12-221ENST00000489032 OR1S2Q8NGQ3 325 aa6.11□□□□□ -1.43
TRAPPC12-221ENST00000489032 RNASEH2CQ8TDP1 164 aaKnown RBP6.11□□□□□ -1.43
TRAPPC12-221ENST00000489032 GNPNAT1Q96EK6 184 aaPredicted RBP6.11□□□□□ -1.43
TRAPPC12-221ENST00000489032 ATP6V0BQ99437 205 aa6.11□□□□□ -1.43
TRAPPC12-221ENST00000489032 TXN2Q99757 166 aa6.11□□□□□ -1.43
TRAPPC12-221ENST00000489032 ARV1Q9H2C2 271 aa6.11□□□□□ -1.43
TRAPPC12-221ENST00000489032 C21orf62Q9NYP8 219 aa6.11□□□□□ -1.43
TRAPPC12-221ENST00000489032 ZMAT5Q9UDW3 170 aaKnown RBP6.11□□□□□ -1.43
TRAPPC12-221ENST00000489032 IGHV3-21A0A0B4J1V1 117 aa6.1□□□□□ -1.43
TRAPPC12-221ENST00000489032 LCE6AA0A183 80 aa6.1□□□□□ -1.43
TRAPPC12-221ENST00000489032 MFSD2BA6NFX1 497 aa6.1□□□□□ -1.43
TRAPPC12-221ENST00000489032 FAM24AA6NFZ4 105 aa6.1□□□□□ -1.43
TRAPPC12-221ENST00000489032 SEC14L6B5MCN3 397 aa6.1□□□□□ -1.43
TRAPPC12-221ENST00000489032 PRAC2D3DTV9 90 aa6.1□□□□□ -1.43
TRAPPC12-221ENST00000489032 NUPL2O15504 423 aaKnown RBP6.1□□□□□ -1.43
TRAPPC12-221ENST00000489032 GNG7O60262 68 aa6.1□□□□□ -1.43
TRAPPC12-221ENST00000489032 MT-CO2P00403 227 aa6.1□□□□□ -1.43
TRAPPC12-221ENST00000489032 IFNA5P01569 189 aa6.1□□□□□ -1.43
TRAPPC12-221ENST00000489032 IFNA4P05014 189 aa6.1□□□□□ -1.43
TRAPPC12-221ENST00000489032 RNASE2P10153 161 aaKnown RBP6.1□□□□□ -1.43
TRAPPC12-221ENST00000489032 IAPPP10997 89 aa6.1□□□□□ -1.43
TRAPPC12-221ENST00000489032 GPR183P32249 361 aa6.1□□□□□ -1.43
TRAPPC12-221ENST00000489032 NPBWR1P48145 328 aa6.1□□□□□ -1.43
TRAPPC12-221ENST00000489032 SULT1A1P50225 295 aa6.1□□□□□ -1.43
TRAPPC12-221ENST00000489032 MFAP2P55001 183 aa6.1□□□□□ -1.43
TRAPPC12-221ENST00000489032 FAM106AQ4KMX7 169 aa6.1□□□□□ -1.43
TRAPPC12-221ENST00000489032 C2orf83Q53S99 150 aa6.1□□□□□ -1.43
TRAPPC12-221ENST00000489032 C9orf66Q5T8R8 295 aa6.1□□□□□ -1.43
TRAPPC12-221ENST00000489032 EIF4E3Q8N5X7 224 aaKnown RBP6.1□□□□□ -1.43
TRAPPC12-221ENST00000489032 ZNF502Q8TBZ5 544 aa6.1□□□□□ -1.43
TRAPPC12-221ENST00000489032 BSCL2Q96G97 398 aaPredicted RBP6.1□□□□□ -1.43
TRAPPC12-221ENST00000489032 OR4C12Q96R67 309 aa6.1□□□□□ -1.43
TRAPPC12-221ENST00000489032 B9D2Q9BPU9 175 aa6.1□□□□□ -1.43
TRAPPC12-221ENST00000489032 GINS3Q9BRX5 216 aa6.1□□□□□ -1.43
TRAPPC12-221ENST00000489032 SMIM3Q9BZL3 60 aa6.1□□□□□ -1.43
TRAPPC12-221ENST00000489032 PSENENQ9NZ42 101 aa6.1□□□□□ -1.43
TRAPPC12-221ENST00000489032 S4R3C0 116 aa6.1□□□□□ -1.43
TRAPPC12-221ENST00000489032 A0A1W2PS18 150 aa6.09□□□□□ -1.43
TRAPPC12-221ENST00000489032 IGSF23A1L1A6 192 aa6.09□□□□□ -1.43
TRAPPC12-221ENST00000489032 OR2T8A6NH00 312 aa6.09□□□□□ -1.43
TRAPPC12-221ENST00000489032 ZNF705EA8MWA4 302 aaPredicted RBP6.09□□□□□ -1.43
TRAPPC12-221ENST00000489032 UMAD1C9J7I0 102 aa6.09□□□□□ -1.43
TRAPPC12-221ENST00000489032 KRBOX1C9JBD0 128 aa6.09□□□□□ -1.43
TRAPPC12-221ENST00000489032 PPP5D1E7EU14 171 aa6.09□□□□□ -1.43
TRAPPC12-221ENST00000489032 TEX46H3BTG2 121 aa6.09□□□□□ -1.43
TRAPPC12-221ENST00000489032 I3L2K1 104 aa6.09□□□□□ -1.43
TRAPPC12-221ENST00000489032 K7EIM0 57 aa6.09□□□□□ -1.43
TRAPPC12-221ENST00000489032 BMPR1BO00238 502 aa6.09□□□□□ -1.43
TRAPPC12-221ENST00000489032 TGOLN2O43493 480 aa6.09□□□□□ -1.43
TRAPPC12-221ENST00000489032 BUB3O43684 328 aa6.09□□□□□ -1.43
TRAPPC12-221ENST00000489032 TRBV12-3P01733 135 aa6.09□□□□□ -1.43
TRAPPC12-221ENST00000489032 IGLL1P15814 213 aa6.09□□□□□ -1.43
TRAPPC12-221ENST00000489032 FCGR2BP31994 310 aaPredicted RBP6.09□□□□□ -1.43
TRAPPC12-221ENST00000489032 SULT1A2P50226 295 aa6.09□□□□□ -1.43
TRAPPC12-221ENST00000489032 INSL3P51460 131 aa6.09□□□□□ -1.43
TRAPPC12-221ENST00000489032 SYNJ2BPP57105 145 aa6.09□□□□□ -1.43
TRAPPC12-221ENST00000489032 RPL36AP83881 106 aaKnown RBP6.09□□□□□ -1.43
TRAPPC12-221ENST00000489032 BSXQ3C1V8 233 aa6.09□□□□□ -1.43
TRAPPC12-221ENST00000489032 FAM74A1Q5RGS3 127 aa6.09□□□□□ -1.43
TRAPPC12-221ENST00000489032 CASC10Q5T4H9 136 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 131.9 ms