RNA–Protein interactions for RNA: ENST00000488896.1

PTPN4-212, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 575 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-212ENST00000488896 GDF5OSQ5U4N7 250 aa0.57□□□□□ -2.32
PTPN4-212ENST00000488896 C22orf39Q6P5X5 142 aa0.57□□□□□ -2.32
PTPN4-212ENST00000488896 DHRS4L2Q6PKH6 230 aa0.57□□□□□ -2.32
PTPN4-212ENST00000488896 C2orf82Q6UX34 121 aa0.57□□□□□ -2.32
PTPN4-212ENST00000488896 TEN1Q86WV5 123 aa0.57□□□□□ -2.32
PTPN4-212ENST00000488896 SMIM20Q8N5G0 67 aa0.57□□□□□ -2.32
PTPN4-212ENST00000488896 CANT1Q8WVQ1 401 aa0.57□□□□□ -2.32
PTPN4-212ENST00000488896 PATE1Q8WXA2 126 aa0.57□□□□□ -2.32
PTPN4-212ENST00000488896 TP53RKQ96S44 253 aa0.57□□□□□ -2.32
PTPN4-212ENST00000488896 TMEM70Q9BUB7 260 aa0.57□□□□□ -2.32
PTPN4-212ENST00000488896 GGACTQ9BVM4 153 aa0.57□□□□□ -2.32
PTPN4-212ENST00000488896 OR2J1Q9GZK6 312 aa0.57□□□□□ -2.32
PTPN4-212ENST00000488896 TMEM138Q9NPI0 162 aa0.57□□□□□ -2.32
PTPN4-212ENST00000488896 UFC1Q9Y3C8 167 aa0.57□□□□□ -2.32
PTPN4-212ENST00000488896 FMN1Q68DA7 1419 aa0.56□□□□□ -2.32
PTPN4-212ENST00000488896 TRAV23DV6A0A075B6W5 121 aa0.56□□□□□ -2.32
PTPN4-212ENST00000488896 A0A096LPI6 279 aa0.56□□□□□ -2.32
PTPN4-212ENST00000488896 TLCD2A6NGC4 264 aa0.56□□□□□ -2.32
PTPN4-212ENST00000488896 H3BRM9 83 aa0.56□□□□□ -2.32
PTPN4-212ENST00000488896 NCR3O14931 201 aa0.56□□□□□ -2.32
PTPN4-212ENST00000488896 CCL25O15444 150 aa0.56□□□□□ -2.32
PTPN4-212ENST00000488896 PIAS1O75925 651 aa0.56□□□□□ -2.32
PTPN4-212ENST00000488896 IFNA14P01570 189 aa0.56□□□□□ -2.32
PTPN4-212ENST00000488896 CRHP06850 196 aa0.56□□□□□ -2.32
PTPN4-212ENST00000488896 OR10J4P0C629 311 aa0.56□□□□□ -2.32
PTPN4-212ENST00000488896 GNG10P50151 68 aa0.56□□□□□ -2.32
PTPN4-212ENST00000488896 INSL3P51460 131 aa0.56□□□□□ -2.32
PTPN4-212ENST00000488896 TCTAP57738 103 aa0.56□□□□□ -2.32
PTPN4-212ENST00000488896 VBP1P61758 197 aa0.56□□□□□ -2.32
PTPN4-212ENST00000488896 MPV17LQ2QL34 196 aa0.56□□□□□ -2.32
PTPN4-212ENST00000488896 C1orf134Q5TEV5 83 aa0.56□□□□□ -2.32
PTPN4-212ENST00000488896 TRIQKQ629K1 86 aa0.56□□□□□ -2.32
PTPN4-212ENST00000488896 C4orf22Q6V702 233 aa0.56□□□□□ -2.32
PTPN4-212ENST00000488896 ZNF431Q8TF32 576 aaPredicted RBP0.56□□□□□ -2.32
PTPN4-212ENST00000488896 MALSU1Q96EH3 234 aa0.56□□□□□ -2.32
PTPN4-212ENST00000488896 LYSMD1Q96S90 227 aa0.56□□□□□ -2.32
PTPN4-212ENST00000488896 HOPXQ9BPY8 73 aaPredicted RBP0.56□□□□□ -2.32
PTPN4-212ENST00000488896 TMEM133Q9H2Q1 129 aa0.56□□□□□ -2.32
PTPN4-212ENST00000488896 CACYBPQ9HB71 228 aaKnown RBP0.56□□□□□ -2.32
PTPN4-212ENST00000488896 ORMDL1Q9P0S3 153 aa0.56□□□□□ -2.32
PTPN4-212ENST00000488896 OBSL1O75147 1896 aa0.56□□□□□ -2.32
PTPN4-212ENST00000488896 CASP8AP2Q9UKL3 1982 aa0.56□□□□□ -2.32
PTPN4-212ENST00000488896 MIA2Q96PC5 1412 aa0.55□□□□□ -2.32
PTPN4-212ENST00000488896 MED1Q15648 1581 aaPredicted RBP0.55□□□□□ -2.32
PTPN4-212ENST00000488896 UNC13CQ8NB66 2214 aa0.55□□□□□ -2.32
PTPN4-212ENST00000488896 IGHV1-58A0A0C4DH39 117 aa0.55□□□□□ -2.32
PTPN4-212ENST00000488896 B4DSR2 109 aa0.55□□□□□ -2.32
PTPN4-212ENST00000488896 C17orf112F2Z3M2 114 aa0.55□□□□□ -2.32
PTPN4-212ENST00000488896 K7ERJ3 54 aa0.55□□□□□ -2.32
PTPN4-212ENST00000488896 MFSD11O43934 449 aa0.55□□□□□ -2.32
PTPN4-212ENST00000488896 GGCTO75223 188 aaKnown RBP0.55□□□□□ -2.32
PTPN4-212ENST00000488896 ERC2-IT1O76042 136 aa0.55□□□□□ -2.32
PTPN4-212ENST00000488896 C1QBP02746 253 aa0.55□□□□□ -2.32
PTPN4-212ENST00000488896 MT-ND6P03923 174 aa0.55□□□□□ -2.32
PTPN4-212ENST00000488896 HOXA6P31267 233 aa0.55□□□□□ -2.32
PTPN4-212ENST00000488896 RAB5CP51148 216 aa0.55□□□□□ -2.32
PTPN4-212ENST00000488896 GNG3P63215 75 aa0.55□□□□□ -2.32
PTPN4-212ENST00000488896 EIF3IQ13347 325 aaKnown RBP0.55□□□□□ -2.32
PTPN4-212ENST00000488896 CIRBPQ14011 172 aaKnown RBP0.55□□□□□ -2.32
PTPN4-212ENST00000488896 SPRNQ5BIV9 151 aa0.55□□□□□ -2.32
PTPN4-212ENST00000488896 C3orf33Q6P1S2 294 aa0.55□□□□□ -2.32
PTPN4-212ENST00000488896 ANGPTL5Q86XS5 388 aa0.55□□□□□ -2.32
PTPN4-212ENST00000488896 OR5D16Q8NGK9 328 aa0.55□□□□□ -2.32
PTPN4-212ENST00000488896 NEK7Q8TDX7 302 aa0.55□□□□□ -2.32
PTPN4-212ENST00000488896 POP5Q969H6 163 aaKnown RBP0.55□□□□□ -2.32
PTPN4-212ENST00000488896 ZC2HC1AQ96GY0 325 aa0.55□□□□□ -2.32
PTPN4-212ENST00000488896 GPX7Q96SL4 187 aaPredicted RBP0.55□□□□□ -2.32
PTPN4-212ENST00000488896 GINS3Q9BRX5 216 aa0.55□□□□□ -2.32
PTPN4-212ENST00000488896 MAP1LC3BQ9GZQ8 125 aa0.55□□□□□ -2.32
PTPN4-212ENST00000488896 WFDC10AQ9H1F0 79 aa0.55□□□□□ -2.32
PTPN4-212ENST00000488896 LYRM2Q9NU23 88 aaPredicted RBP0.55□□□□□ -2.32
PTPN4-212ENST00000488896 MYH7BA7E2Y1 1941 aa0.55□□□□□ -2.32
PTPN4-212ENST00000488896 KMT2DO14686 5537 aa0.55□□□□□ -2.32
PTPN4-212ENST00000488896 DENND4CQ5VZ89 1909 aa0.54□□□□□ -2.32
PTPN4-212ENST00000488896 LOC110117498A0A087WWA1 95 aa0.54□□□□□ -2.32
PTPN4-212ENST00000488896 C5orf58C9J3I9 102 aa0.54□□□□□ -2.32
PTPN4-212ENST00000488896 TMEM238C9JI98 176 aa0.54□□□□□ -2.32
PTPN4-212ENST00000488896 E5RI56 91 aa0.54□□□□□ -2.32
PTPN4-212ENST00000488896 LYRM1O43325 122 aa0.54□□□□□ -2.32
PTPN4-212ENST00000488896 IFNA4P05014 189 aa0.54□□□□□ -2.32
PTPN4-212ENST00000488896 CRYBA4P53673 196 aa0.54□□□□□ -2.32
PTPN4-212ENST00000488896 PSG9Q00887 426 aa0.54□□□□□ -2.32
PTPN4-212ENST00000488896 KLRD1Q13241 179 aa0.54□□□□□ -2.32
PTPN4-212ENST00000488896 LTC4SQ16873 150 aa0.54□□□□□ -2.32
PTPN4-212ENST00000488896 VMA21Q3ZAQ7 101 aa0.54□□□□□ -2.32
PTPN4-212ENST00000488896 FKBP1CQ5VVH2 108 aa0.54□□□□□ -2.32
PTPN4-212ENST00000488896 DCUN1D2Q6PH85 259 aa0.54□□□□□ -2.32
PTPN4-212ENST00000488896 LRRC18Q8N456 261 aa0.54□□□□□ -2.32
PTPN4-212ENST00000488896 Q8TAT8 98 aa0.54□□□□□ -2.32
PTPN4-212ENST00000488896 MUCL1Q96DR8 90 aa0.54□□□□□ -2.32
PTPN4-212ENST00000488896 BORCS8Q96FH0 119 aa0.54□□□□□ -2.32
PTPN4-212ENST00000488896 LINC00526Q96FQ7 95 aa0.54□□□□□ -2.32
PTPN4-212ENST00000488896 TEX37Q96LM6 180 aa0.54□□□□□ -2.32
PTPN4-212ENST00000488896 LINC00467Q9BRT7 94 aa0.54□□□□□ -2.32
PTPN4-212ENST00000488896 PBOV1Q9GZY1 135 aa0.54□□□□□ -2.32
PTPN4-212ENST00000488896 SH3BGRL3Q9H299 93 aa0.54□□□□□ -2.32
PTPN4-212ENST00000488896 BIN3Q9NQY0 253 aa0.54□□□□□ -2.32
PTPN4-212ENST00000488896 OR52A1Q9UKL2 312 aa0.54□□□□□ -2.32
PTPN4-212ENST00000488896 TNFSF18Q9UNG2 199 aa0.54□□□□□ -2.32
PTPN4-212ENST00000488896 CHCHD2Q9Y6H1 151 aaPredicted RBP0.54□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms