RNA–Protein interactions for RNA: ENST00000488320.1

COL17A1-207, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 626 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-207ENST00000488320 LY96Q9Y6Y9 160 aa6.28□□□□□ -1.4
COL17A1-207ENST00000488320 H7BYZ3 331 aa6.27□□□□□ -1.41
COL17A1-207ENST00000488320 RCVRNP35243 200 aa6.27□□□□□ -1.41
COL17A1-207ENST00000488320 RND3P61587 244 aa6.27□□□□□ -1.41
COL17A1-207ENST00000488320 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.27□□□□□ -1.41
COL17A1-207ENST00000488320 LINC00612Q8N6U2 182 aa6.27□□□□□ -1.41
COL17A1-207ENST00000488320 ZNF486Q96H40 463 aaPredicted RBP6.27□□□□□ -1.41
COL17A1-207ENST00000488320 VSIG2Q96IQ7 327 aa6.27□□□□□ -1.41
COL17A1-207ENST00000488320 SLC35E1Q96K37 410 aa6.27□□□□□ -1.41
COL17A1-207ENST00000488320 COPZ2Q9P299 210 aa6.27□□□□□ -1.41
COL17A1-207ENST00000488320 ICOSQ9Y6W8 199 aa6.27□□□□□ -1.41
COL17A1-207ENST00000488320 TRGV2A0A075B6R0 118 aa6.26□□□□□ -1.41
COL17A1-207ENST00000488320 EVI2AP22794 236 aa6.26□□□□□ -1.41
COL17A1-207ENST00000488320 CDKN1BP46527 198 aa6.26□□□□□ -1.41
COL17A1-207ENST00000488320 FAM219AQ8IW50 185 aa6.26□□□□□ -1.41
COL17A1-207ENST00000488320 OR1B1Q8NGR6 318 aa6.26□□□□□ -1.41
COL17A1-207ENST00000488320 LRRC20Q8TCA0 184 aa6.26□□□□□ -1.41
COL17A1-207ENST00000488320 TMEM170AQ8WVE7 144 aa6.26□□□□□ -1.41
COL17A1-207ENST00000488320 IGKV1D-37A0A075B6S9 117 aa6.25□□□□□ -1.41
COL17A1-207ENST00000488320 TRAV8-2A0A0B4J237 113 aa6.25□□□□□ -1.41
COL17A1-207ENST00000488320 LOC100506127A0A0U1RQW1 187 aa6.25□□□□□ -1.41
COL17A1-207ENST00000488320 PAX4O43316 350 aa6.25□□□□□ -1.41
COL17A1-207ENST00000488320 OR5AC1P0C628 307 aa6.25□□□□□ -1.41
COL17A1-207ENST00000488320 S100A7P31151 101 aa6.25□□□□□ -1.41
COL17A1-207ENST00000488320 PSG3Q16557 428 aa6.25□□□□□ -1.41
COL17A1-207ENST00000488320 UBE2NLQ5JXB2 153 aa6.25□□□□□ -1.41
COL17A1-207ENST00000488320 LYPD5Q6UWN5 251 aa6.25□□□□□ -1.41
COL17A1-207ENST00000488320 ARRDC1Q8N5I2 433 aa6.25□□□□□ -1.41
COL17A1-207ENST00000488320 CCDC71LQ8N9Z2 235 aa6.25□□□□□ -1.41
COL17A1-207ENST00000488320 OR8A1Q8NGG7 326 aa6.25□□□□□ -1.41
COL17A1-207ENST00000488320 CACNG5Q9UF02 275 aa6.25□□□□□ -1.41
COL17A1-207ENST00000488320 BLOC1S6Q9UL45 172 aa6.25□□□□□ -1.41
COL17A1-207ENST00000488320 U3KQ87 197 aa6.25□□□□□ -1.41
COL17A1-207ENST00000488320 RNF213Q63HN8 5207 aa6.24□□□□□ -1.41
COL17A1-207ENST00000488320 C1QBP02746 253 aa6.24□□□□□ -1.41
COL17A1-207ENST00000488320 PRB4P10163 310 aaPredicted RBP6.24□□□□□ -1.41
COL17A1-207ENST00000488320 ORM2P19652 201 aa6.24□□□□□ -1.41
COL17A1-207ENST00000488320 GPX4P36969 197 aaPredicted RBP6.24□□□□□ -1.41
COL17A1-207ENST00000488320 LINC01559Q495D7 138 aa6.24□□□□□ -1.41
COL17A1-207ENST00000488320 NMSQ5H8A3 153 aa6.24□□□□□ -1.41
COL17A1-207ENST00000488320 GGNBP1Q5YKI7 109 aa6.24□□□□□ -1.41
COL17A1-207ENST00000488320 Q6ZTI0 123 aa6.24□□□□□ -1.41
COL17A1-207ENST00000488320 LGI3Q8N145 548 aa6.24□□□□□ -1.41
COL17A1-207ENST00000488320 Q8N814 137 aa6.24□□□□□ -1.41
COL17A1-207ENST00000488320 OR4D5Q8NGN0 318 aa6.24□□□□□ -1.41
COL17A1-207ENST00000488320 GPR82Q96P67 336 aa6.24□□□□□ -1.41
COL17A1-207ENST00000488320 LINC00467Q9BRT7 94 aa6.24□□□□□ -1.41
COL17A1-207ENST00000488320 K7EP13 123 aa6.23□□□□□ -1.41
COL17A1-207ENST00000488320 CFDP00746 253 aaPredicted RBP6.23□□□□□ -1.41
COL17A1-207ENST00000488320 CRYGDP07320 174 aa6.23□□□□□ -1.41
COL17A1-207ENST00000488320 AQP4P55087 323 aa6.23□□□□□ -1.41
COL17A1-207ENST00000488320 MEF2DQ14814 521 aa6.23□□□□□ -1.41
COL17A1-207ENST00000488320 AARDQ4LEZ3 155 aa6.23□□□□□ -1.41
COL17A1-207ENST00000488320 SAMD12Q8N8I0 201 aa6.23□□□□□ -1.41
COL17A1-207ENST00000488320 ZFAND1Q8TCF1 268 aa6.23□□□□□ -1.41
COL17A1-207ENST00000488320 GPX8Q8TED1 209 aa6.23□□□□□ -1.41
COL17A1-207ENST00000488320 TRGV9Q99603 122 aa6.23□□□□□ -1.41
COL17A1-207ENST00000488320 C20orf144Q9BQM9 153 aa6.23□□□□□ -1.41
COL17A1-207ENST00000488320 TMEM147Q9BVK8 224 aa6.23□□□□□ -1.41
COL17A1-207ENST00000488320 TRGV1A0A0A0MS02 117 aa6.22□□□□□ -1.41
COL17A1-207ENST00000488320 TEX13DA0A0J9YY54 714 aaPredicted RBP6.22□□□□□ -1.41
COL17A1-207ENST00000488320 SMIM31A0A1B0GVY4 71 aa6.22□□□□□ -1.41
COL17A1-207ENST00000488320 LRCOL1A6NCL2 159 aa6.22□□□□□ -1.41
COL17A1-207ENST00000488320 J3KRW8 73 aa6.22□□□□□ -1.41
COL17A1-207ENST00000488320 TMEM127O75204 238 aa6.22□□□□□ -1.41
COL17A1-207ENST00000488320 ZNF324O75467 553 aaPredicted RBP6.22□□□□□ -1.41
COL17A1-207ENST00000488320 B3GALNT1O75752 331 aa6.22□□□□□ -1.41
COL17A1-207ENST00000488320 TNFAIP8O95379 198 aa6.22□□□□□ -1.41
COL17A1-207ENST00000488320 CDS2O95674 445 aa6.22□□□□□ -1.41
COL17A1-207ENST00000488320 KIR3DS1Q14943 382 aa6.22□□□□□ -1.41
COL17A1-207ENST00000488320 MRPL23Q16540 153 aaKnown RBP6.22□□□□□ -1.41
COL17A1-207ENST00000488320 NEGR1Q7Z3B1 354 aa6.22□□□□□ -1.41
COL17A1-207ENST00000488320 CCDC190Q86UF4 302 aa6.22□□□□□ -1.41
COL17A1-207ENST00000488320 SNX29P2Q8IUI4 249 aa6.22□□□□□ -1.41
COL17A1-207ENST00000488320 SELENOHQ8IZQ5 122 aaKnown RBP6.22□□□□□ -1.41
COL17A1-207ENST00000488320 C10orf126Q8N4M7 172 aa6.22□□□□□ -1.41
COL17A1-207ENST00000488320 DTD1Q8TEA8 209 aa6.22□□□□□ -1.41
COL17A1-207ENST00000488320 RBPMSQ93062 196 aaKnown RBP6.22□□□□□ -1.41
COL17A1-207ENST00000488320 CNBD2Q96M20 576 aa6.22□□□□□ -1.41
COL17A1-207ENST00000488320 CACFD1Q9UGQ2 172 aa6.22□□□□□ -1.41
COL17A1-207ENST00000488320 PAIP2BQ9ULR5 123 aaKnown RBP6.22□□□□□ -1.41
COL17A1-207ENST00000488320 SLC45A2Q9UMX9 530 aa6.22□□□□□ -1.41
COL17A1-207ENST00000488320 TMEM56-RWDD3S4R434 201 aa6.22□□□□□ -1.41
COL17A1-207ENST00000488320 PRAF2O60831 178 aa6.21□□□□□ -1.42
COL17A1-207ENST00000488320 IGHV3-53P01767 116 aa6.21□□□□□ -1.42
COL17A1-207ENST00000488320 SULT1A3P0DMM9 295 aa6.21□□□□□ -1.42
COL17A1-207ENST00000488320 SULT1A4P0DMN0 295 aa6.21□□□□□ -1.42
COL17A1-207ENST00000488320 RAB11AP62491 216 aa6.21□□□□□ -1.42
COL17A1-207ENST00000488320 DAZ2Q13117 558 aaKnown RBP6.21□□□□□ -1.42
COL17A1-207ENST00000488320 SLAQ13239 276 aa6.21□□□□□ -1.42
COL17A1-207ENST00000488320 TMEM268Q5VZI3 342 aa6.21□□□□□ -1.42
COL17A1-207ENST00000488320 STEAP1BQ6NZ63 245 aa6.21□□□□□ -1.42
COL17A1-207ENST00000488320 WFDC10BQ8IUB3 73 aa6.21□□□□□ -1.42
COL17A1-207ENST00000488320 CROCCP3Q8IVE0 287 aa6.21□□□□□ -1.42
COL17A1-207ENST00000488320 BPIFCQ8NFQ6 507 aa6.21□□□□□ -1.42
COL17A1-207ENST00000488320 RPUSD4Q96CM3 377 aaKnown RBP6.21□□□□□ -1.42
COL17A1-207ENST00000488320 PARD6GQ9BYG4 376 aaPredicted RBP6.21□□□□□ -1.42
COL17A1-207ENST00000488320 TMEM222Q9H0R3 208 aa6.21□□□□□ -1.42
COL17A1-207ENST00000488320 RBKSQ9H477 322 aa6.21□□□□□ -1.42
COL17A1-207ENST00000488320 PRO0255Q9UI72 69 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms