RNA–Protein interactions for RNA: ENST00000488171.5

CD55-209, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 3

Gene CD55, Length 1,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-209ENST00000488171 CENPXA8MT69 81 aa13.83□□□□□ -0.2
CD55-209ENST00000488171 H3BRN7 92 aa13.83□□□□□ -0.2
CD55-209ENST00000488171 TMEM14EPQ6UXP3 125 aa13.83□□□□□ -0.2
CD55-209ENST00000488171 C1orf158Q8N1D5 194 aa13.83□□□□□ -0.2
CD55-209ENST00000488171 SLC25A39Q9BZJ4 359 aaPredicted RBP13.83□□□□□ -0.2
CD55-209ENST00000488171 DOK5Q9P104 306 aa13.83□□□□□ -0.2
CD55-209ENST00000488171 RFNGQ9Y644 331 aa13.83□□□□□ -0.2
CD55-209ENST00000488171 DNAH6Q9C0G6 4158 aa13.82□□□□□ -0.2
CD55-209ENST00000488171 TRAV8-2A0A0B4J237 113 aa13.82□□□□□ -0.2
CD55-209ENST00000488171 TMEM189A5PLL7 270 aa13.82□□□□□ -0.2
CD55-209ENST00000488171 IL5P05113 134 aa13.82□□□□□ -0.2
CD55-209ENST00000488171 METTL15P1P0C7V9 234 aa13.82□□□□□ -0.2
CD55-209ENST00000488171 EMP1P54849 157 aa13.82□□□□□ -0.2
CD55-209ENST00000488171 IAH1Q2TAA2 248 aaPredicted RBP13.82□□□□□ -0.2
CD55-209ENST00000488171 AMTNQ6UX39 209 aa13.82□□□□□ -0.2
CD55-209ENST00000488171 MITD1Q8WV92 249 aa13.82□□□□□ -0.2
CD55-209ENST00000488171 SHANK2-AS3Q9BTD1 123 aa13.82□□□□□ -0.2
CD55-209ENST00000488171 SCGB1D2O95969 90 aa13.81□□□□□ -0.2
CD55-209ENST00000488171 SPART-AS1P0CW21 52 aa13.81□□□□□ -0.2
CD55-209ENST00000488171 S100A7P31151 101 aa13.81□□□□□ -0.2
CD55-209ENST00000488171 PLP1P60201 277 aa13.81□□□□□ -0.2
CD55-209ENST00000488171 RRAS2P62070 204 aaPredicted RBP13.81□□□□□ -0.2
CD55-209ENST00000488171 DLK1P80370 383 aa13.81□□□□□ -0.2
CD55-209ENST00000488171 IGFL4Q6B9Z1 124 aa13.81□□□□□ -0.2
CD55-209ENST00000488171 ZBTB8BQ8NAP8 495 aaPredicted RBP13.81□□□□□ -0.2
CD55-209ENST00000488171 HIGD1AQ9Y241 93 aa13.81□□□□□ -0.2
CD55-209ENST00000488171 RCL1Q9Y2P8 373 aaKnown RBP13.81□□□□□ -0.2
CD55-209ENST00000488171 GOLT1BQ9Y3E0 138 aa13.81□□□□□ -0.2
CD55-209ENST00000488171 FNDC10F2Z333 226 aa13.8□□□□□ -0.2
CD55-209ENST00000488171 PLA2G10O15496 165 aa13.8□□□□□ -0.2
CD55-209ENST00000488171 LINC00869P0C866 280 aa13.8□□□□□ -0.2
CD55-209ENST00000488171 DKK2Q9UBU2 259 aa13.8□□□□□ -0.2
CD55-209ENST00000488171 HYPMO75409 117 aa13.79□□□□□ -0.2
CD55-209ENST00000488171 TAS2R30P59541 319 aa13.79□□□□□ -0.2
CD55-209ENST00000488171 RAP2BP61225 183 aa13.79□□□□□ -0.2
CD55-209ENST00000488171 SELENOTP62341 195 aa13.79□□□□□ -0.2
CD55-209ENST00000488171 CNPY1Q3B7I2 92 aa13.79□□□□□ -0.2
CD55-209ENST00000488171 RNF182Q8N6D2 247 aa13.79□□□□□ -0.2
CD55-209ENST00000488171 UHRF2Q96PU4 802 aa13.79□□□□□ -0.2
CD55-209ENST00000488171 C20orf85Q9H1P6 137 aa13.79□□□□□ -0.2
CD55-209ENST00000488171 NPVFQ9HCQ7 196 aa13.79□□□□□ -0.2
CD55-209ENST00000488171 GSKIPQ9P0R6 139 aa13.79□□□□□ -0.2
CD55-209ENST00000488171 K7EPK0 472 aa13.78□□□□□ -0.2
CD55-209ENST00000488171 TSC22D2O75157 780 aa13.78□□□□□ -0.2
CD55-209ENST00000488171 CNN1P51911 297 aaKnown RBP13.78□□□□□ -0.2
CD55-209ENST00000488171 ARL16Q0P5N6 197 aa13.78□□□□□ -0.2
CD55-209ENST00000488171 FAM222AQ5U5X8 452 aa13.78□□□□□ -0.2
CD55-209ENST00000488171 OR10P1Q8NGE3 313 aa13.78□□□□□ -0.2
CD55-209ENST00000488171 IGF2BP2-AS1Q96M15 143 aa13.78□□□□□ -0.2
CD55-209ENST00000488171 NDUFAF3Q9BU61 184 aa13.78□□□□□ -0.2
CD55-209ENST00000488171 LOC102723971A0A1B0GUV8 181 aa13.77□□□□□ -0.21
CD55-209ENST00000488171 HBE1P02100 147 aa13.77□□□□□ -0.21
CD55-209ENST00000488171 MBPP02686 304 aaPredicted RBP13.77□□□□□ -0.21
CD55-209ENST00000488171 OR5G3P0C626 314 aa13.77□□□□□ -0.21
CD55-209ENST00000488171 RPL7P18124 248 aaKnown RBP13.77□□□□□ -0.21
CD55-209ENST00000488171 FGL1Q08830 312 aa13.77□□□□□ -0.21
CD55-209ENST00000488171 SLC38A11Q08AI6 406 aa13.77□□□□□ -0.21
CD55-209ENST00000488171 PATE2Q6UY27 113 aa13.77□□□□□ -0.21
CD55-209ENST00000488171 OR11H7Q8NGC8 314 aa13.77□□□□□ -0.21
CD55-209ENST00000488171 PLA2G2EQ9NZK7 142 aa13.77□□□□□ -0.21
CD55-209ENST00000488171 TEX48A0A1B0GUV7 120 aa13.76□□□□□ -0.21
CD55-209ENST00000488171 C7orf66A4D0T2 115 aa13.76□□□□□ -0.21
CD55-209ENST00000488171 CRXO43186 299 aaPredicted RBP13.76□□□□□ -0.21
CD55-209ENST00000488171 LYRM1O43325 122 aa13.76□□□□□ -0.21
CD55-209ENST00000488171 DUSP14O95147 198 aaKnown RBP13.76□□□□□ -0.21
CD55-209ENST00000488171 TEPPQ6URK8 271 aa13.76□□□□□ -0.21
CD55-209ENST00000488171 NIPSNAP3BQ9BS92 247 aa13.76□□□□□ -0.21
CD55-209ENST00000488171 ARL6Q9H0F7 186 aa13.76□□□□□ -0.21
CD55-209ENST00000488171 MGAT4CQ9UBM8 478 aa13.76□□□□□ -0.21
CD55-209ENST00000488171 YTHDF2Q9Y5A9 579 aaKnown RBP13.76□□□□□ -0.21
CD55-209ENST00000488171 A0A087X0K7 114 aa13.75□□□□□ -0.21
CD55-209ENST00000488171 M0R2Z0 102 aa13.75□□□□□ -0.21
CD55-209ENST00000488171 CCSO14618 274 aa13.75□□□□□ -0.21
CD55-209ENST00000488171 SPINK13Q1W4C9 94 aa13.75□□□□□ -0.21
CD55-209ENST00000488171 RRN3P1Q2M238 152 aa13.75□□□□□ -0.21
CD55-209ENST00000488171 ZNF738Q8NE65 137 aa13.75□□□□□ -0.21
CD55-209ENST00000488171 MRPS12O15235 138 aaKnown RBP13.74□□□□□ -0.21
CD55-209ENST00000488171 TCRBP04435 133 aa13.74□□□□□ -0.21
CD55-209ENST00000488171 P0DMU3 169 aa13.74□□□□□ -0.21
CD55-209ENST00000488171 FAM231AP0DMU4 169 aa13.74□□□□□ -0.21
CD55-209ENST00000488171 FAM231CP0DMU5 169 aa13.74□□□□□ -0.21
CD55-209ENST00000488171 OXA1LQ15070 435 aa13.74□□□□□ -0.21
CD55-209ENST00000488171 ARV1Q9H2C2 271 aa13.74□□□□□ -0.21
CD55-209ENST00000488171 CXCL3P19876 107 aa13.73□□□□□ -0.21
CD55-209ENST00000488171 DMRTA1Q5VZB9 504 aa13.73□□□□□ -0.21
CD55-209ENST00000488171 POM121L12Q8N7R1 296 aa13.73□□□□□ -0.21
CD55-209ENST00000488171 TMEM208Q9BTX3 173 aa13.73□□□□□ -0.21
CD55-209ENST00000488171 GGACTQ9BVM4 153 aa13.73□□□□□ -0.21
CD55-209ENST00000488171 TRAV6A0A075B6T7 132 aa13.72□□□□□ -0.21
CD55-209ENST00000488171 AGPAT2O15120 278 aa13.72□□□□□ -0.21
CD55-209ENST00000488171 PRM2P04554 102 aa13.72□□□□□ -0.21
CD55-209ENST00000488171 PXDC1Q5TGL8 231 aa13.72□□□□□ -0.21
CD55-209ENST00000488171 S100A7AQ86SG5 101 aa13.72□□□□□ -0.21
CD55-209ENST00000488171 ZNF546Q86UE3 836 aa13.72□□□□□ -0.21
CD55-209ENST00000488171 BAP18Q8IXM2 172 aa13.72□□□□□ -0.21
CD55-209ENST00000488171 FAM210BQ96KR6 192 aa13.72□□□□□ -0.21
CD55-209ENST00000488171 SEC22CQ9BRL7 303 aa13.72□□□□□ -0.21
CD55-209ENST00000488171 NDUFA13Q9P0J0 144 aa13.72□□□□□ -0.21
CD55-209ENST00000488171 GOSR2O14653 212 aa13.71□□□□□ -0.21
CD55-209ENST00000488171 INSP01308 110 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms