RNA–Protein interactions for RNA: ENST00000488058.1

RNF38-208, Transcript of ring finger protein 38, humanhuman

TSL 3

Gene RNF38, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-208ENST00000488058 GGACTQ9BVM4 153 aa17.24■□□□□ 0.35
RNF38-208ENST00000488058 C1QTNF4Q9BXJ3 329 aa17.24■□□□□ 0.35
RNF38-208ENST00000488058 IGHV4-28A0A0C4DH34 117 aa17.23■□□□□ 0.35
RNF38-208ENST00000488058 F6UB75 175 aa17.23■□□□□ 0.35
RNF38-208ENST00000488058 DEDDO75618 318 aa17.23■□□□□ 0.35
RNF38-208ENST00000488058 PLP1P60201 277 aa17.23■□□□□ 0.35
RNF38-208ENST00000488058 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa17.23■□□□□ 0.35
RNF38-208ENST00000488058 ZNF546Q86UE3 836 aa17.23■□□□□ 0.35
RNF38-208ENST00000488058 Q8NAQ8 132 aa17.23■□□□□ 0.35
RNF38-208ENST00000488058 AGPAT2O15120 278 aa17.22■□□□□ 0.35
RNF38-208ENST00000488058 MIFP14174 115 aa17.22■□□□□ 0.35
RNF38-208ENST00000488058 EBLN2Q6P2I7 272 aa17.22■□□□□ 0.35
RNF38-208ENST00000488058 NRARPQ7Z6K4 114 aa17.22■□□□□ 0.35
RNF38-208ENST00000488058 CSNK1G2-AS1Q8NCQ2 148 aa17.22■□□□□ 0.35
RNF38-208ENST00000488058 PHLDA1Q8WV24 401 aaPredicted RBP17.22■□□□□ 0.35
RNF38-208ENST00000488058 C20orf173Q96LM9 149 aa17.22■□□□□ 0.35
RNF38-208ENST00000488058 MFFQ9GZY8 342 aa17.22■□□□□ 0.35
RNF38-208ENST00000488058 C11orf1Q9H5F2 150 aa17.22■□□□□ 0.35
RNF38-208ENST00000488058 BATF3Q9NR55 127 aa17.22■□□□□ 0.35
RNF38-208ENST00000488058 RPRMQ9NS64 109 aa17.22■□□□□ 0.35
RNF38-208ENST00000488058 KLK5Q9Y337 293 aaPredicted RBP17.22■□□□□ 0.35
RNF38-208ENST00000488058 ZNF705EA8MWA4 302 aaPredicted RBP17.21■□□□□ 0.35
RNF38-208ENST00000488058 S100A7AQ86SG5 101 aa17.21■□□□□ 0.35
RNF38-208ENST00000488058 ARV1Q9H2C2 271 aa17.21■□□□□ 0.35
RNF38-208ENST00000488058 X6R8D5 127 aa17.21■□□□□ 0.35
RNF38-208ENST00000488058 INMT-MINDY4F8WBC2 141 aa17.2■□□□□ 0.34
RNF38-208ENST00000488058 SIX6O95475 246 aa17.2■□□□□ 0.34
RNF38-208ENST00000488058 RBMY1A1P0DJD3 496 aaKnown RBP17.2■□□□□ 0.34
RNF38-208ENST00000488058 RBMY1CP0DJD4 496 aa17.2■□□□□ 0.34
RNF38-208ENST00000488058 RPL7P18124 248 aaKnown RBP17.2■□□□□ 0.34
RNF38-208ENST00000488058 RBMY1FQ15415 496 aaKnown RBP17.2■□□□□ 0.34
RNF38-208ENST00000488058 IGFL4Q6B9Z1 124 aa17.2■□□□□ 0.34
RNF38-208ENST00000488058 C17orf77Q96MU5 243 aa17.2■□□□□ 0.34
RNF38-208ENST00000488058 MGST2Q99735 147 aa17.2■□□□□ 0.34
RNF38-208ENST00000488058 RYR2Q92736 4967 aa17.2■□□□□ 0.34
RNF38-208ENST00000488058 DEFA1P59665 94 aa17.19■□□□□ 0.34
RNF38-208ENST00000488058 DEFA3P59666 94 aa17.19■□□□□ 0.34
RNF38-208ENST00000488058 IL15RAQ13261 267 aa17.19■□□□□ 0.34
RNF38-208ENST00000488058 FAM78BQ5VT40 261 aa17.19■□□□□ 0.34
RNF38-208ENST00000488058 PATE2Q6UY27 113 aa17.19■□□□□ 0.34
RNF38-208ENST00000488058 LYRM2Q9NU23 88 aaPredicted RBP17.19■□□□□ 0.34
RNF38-208ENST00000488058 UQCC1Q9NVA1 299 aa17.19■□□□□ 0.34
RNF38-208ENST00000488058 SACSQ9NZJ4 4579 aa17.18■□□□□ 0.34
RNF38-208ENST00000488058 IGSF23A1L1A6 192 aa17.18■□□□□ 0.34
RNF38-208ENST00000488058 COX7A2P2O60397 106 aa17.18■□□□□ 0.34
RNF38-208ENST00000488058 PRAF2O60831 178 aa17.18■□□□□ 0.34
RNF38-208ENST00000488058 SULT1A1P50225 295 aa17.18■□□□□ 0.34
RNF38-208ENST00000488058 PXDC1Q5TGL8 231 aa17.18■□□□□ 0.34
RNF38-208ENST00000488058 SPATA31B1PQ5VZV4 182 aa17.18■□□□□ 0.34
RNF38-208ENST00000488058 STX12Q86Y82 276 aa17.18■□□□□ 0.34
RNF38-208ENST00000488058 RNF182Q8N6D2 247 aa17.18■□□□□ 0.34
RNF38-208ENST00000488058 SLC35B3Q9H1N7 401 aa17.18■□□□□ 0.34
RNF38-208ENST00000488058 IGHV3OR16-12A0A075B7B8 117 aa17.17■□□□□ 0.34
RNF38-208ENST00000488058 A0A0J9YX75 114 aa17.17■□□□□ 0.34
RNF38-208ENST00000488058 UBE2L5PA0A1B0GUS4 154 aa17.17■□□□□ 0.34
RNF38-208ENST00000488058 CAMLGP49069 296 aa17.17■□□□□ 0.34
RNF38-208ENST00000488058 RAB31Q13636 194 aa17.17■□□□□ 0.34
RNF38-208ENST00000488058 TMEM252Q8N6L7 170 aa17.17■□□□□ 0.34
RNF38-208ENST00000488058 LRRC20Q8TCA0 184 aa17.17■□□□□ 0.34
RNF38-208ENST00000488058 PSG9Q00887 426 aa17.16■□□□□ 0.34
RNF38-208ENST00000488058 BAXQ07812 192 aa17.16■□□□□ 0.34
RNF38-208ENST00000488058 LINC00305Q7Z4B0 112 aa17.16■□□□□ 0.34
RNF38-208ENST00000488058 RNF24Q9Y225 148 aa17.16■□□□□ 0.34
RNF38-208ENST00000488058 TRAV8-2A0A0B4J237 113 aa17.15■□□□□ 0.34
RNF38-208ENST00000488058 LY6G6CO95867 125 aa17.15■□□□□ 0.34
RNF38-208ENST00000488058 S100A11P31949 105 aa17.15■□□□□ 0.34
RNF38-208ENST00000488058 HBG1P69891 147 aa17.15■□□□□ 0.34
RNF38-208ENST00000488058 HBG2P69892 147 aa17.15■□□□□ 0.34
RNF38-208ENST00000488058 LRRC37A5PQ49AS3 106 aa17.15■□□□□ 0.34
RNF38-208ENST00000488058 MIC13Q5XKP0 118 aa17.15■□□□□ 0.34
RNF38-208ENST00000488058 ZNF738Q8NE65 137 aa17.15■□□□□ 0.34
RNF38-208ENST00000488058 CLUHP3Q96NS8 147 aa17.15■□□□□ 0.34
RNF38-208ENST00000488058 WDR83OSQ9Y284 106 aa17.15■□□□□ 0.34
RNF38-208ENST00000488058 ELOA3CA0A087WX78 387 aaPredicted RBP17.14■□□□□ 0.33
RNF38-208ENST00000488058 C10orf113Q5VZT2 155 aa17.14■□□□□ 0.33
RNF38-208ENST00000488058 Q6ZRG5 221 aa17.14■□□□□ 0.33
RNF38-208ENST00000488058 ZNF709Q8N972 641 aa17.14■□□□□ 0.33
RNF38-208ENST00000488058 LINC00476Q8WZB0 136 aa17.14■□□□□ 0.33
RNF38-208ENST00000488058 RLN2P04090 185 aa17.13■□□□□ 0.33
RNF38-208ENST00000488058 SNRPCP09234 159 aaKnown RBP17.13■□□□□ 0.33
RNF38-208ENST00000488058 ZNF705DP0CH99 300 aaPredicted RBP17.13■□□□□ 0.33
RNF38-208ENST00000488058 ZNF705BP0CI00 300 aaPredicted RBP17.13■□□□□ 0.33
RNF38-208ENST00000488058 MARVELD1Q9BSK0 173 aa17.13■□□□□ 0.33
RNF38-208ENST00000488058 LYSTQ99698 3801 aa17.12■□□□□ 0.33
RNF38-208ENST00000488058 A0A087X0K7 114 aa17.12■□□□□ 0.33
RNF38-208ENST00000488058 FGF7P21781 194 aa17.12■□□□□ 0.33
RNF38-208ENST00000488058 HLA-DMBP28068 263 aa17.12■□□□□ 0.33
RNF38-208ENST00000488058 VWC2Q2TAL6 325 aa17.12■□□□□ 0.33
RNF38-208ENST00000488058 TMEM37Q8WXS4 190 aa17.12■□□□□ 0.33
RNF38-208ENST00000488058 NMES1Q9C002 83 aa17.12■□□□□ 0.33
RNF38-208ENST00000488058 HRH4Q9H3N8 390 aa17.12■□□□□ 0.33
RNF38-208ENST00000488058 SSNA1O43805 119 aa17.11■□□□□ 0.33
RNF38-208ENST00000488058 DUSP14O95147 198 aaKnown RBP17.11■□□□□ 0.33
RNF38-208ENST00000488058 CNN1P51911 297 aaKnown RBP17.11■□□□□ 0.33
RNF38-208ENST00000488058 ATP6V1FQ16864 119 aa17.11■□□□□ 0.33
RNF38-208ENST00000488058 MORN5Q5VZ52 161 aa17.11■□□□□ 0.33
RNF38-208ENST00000488058 ZNF705AQ6ZN79 300 aaPredicted RBP17.11■□□□□ 0.33
RNF38-208ENST00000488058 OR5AC2Q9NZP5 309 aa17.11■□□□□ 0.33
RNF38-208ENST00000488058 GOLT1BQ9Y3E0 138 aa17.11■□□□□ 0.33
RNF38-208ENST00000488058 MRPS12O15235 138 aaKnown RBP17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms