RNA–Protein interactions for RNA: ENST00000487880.2

USP48-209, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 524 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-209ENST00000487880 OR1E2P47887 323 aa1.92□□□□□ -2.1
USP48-209ENST00000487880 POLR2HP52434 150 aaKnown RBP1.92□□□□□ -2.1
USP48-209ENST00000487880 RHOAP61586 193 aa1.92□□□□□ -2.1
USP48-209ENST00000487880 HIST1H3AP68431 136 aa1.92□□□□□ -2.1
USP48-209ENST00000487880 HBA1P69905 142 aa1.92□□□□□ -2.1
USP48-209ENST00000487880 RPL19P84098 196 aaKnown RBP1.92□□□□□ -2.1
USP48-209ENST00000487880 CDK5R1Q15078 307 aa1.92□□□□□ -2.1
USP48-209ENST00000487880 EBPQ15125 230 aaKnown RBP1.92□□□□□ -2.1
USP48-209ENST00000487880 BSXQ3C1V8 233 aa1.92□□□□□ -2.1
USP48-209ENST00000487880 FAM162BQ5T6X4 162 aa1.92□□□□□ -2.1
USP48-209ENST00000487880 FKBP1CQ5VVH2 108 aa1.92□□□□□ -2.1
USP48-209ENST00000487880 TOMM20LQ6UXN7 152 aa1.92□□□□□ -2.1
USP48-209ENST00000487880 DPPA3Q6W0C5 159 aa1.92□□□□□ -2.1
USP48-209ENST00000487880 DGAT2L6Q6ZPD8 337 aa1.92□□□□□ -2.1
USP48-209ENST00000487880 TMEM86AQ8N2M4 240 aa1.92□□□□□ -2.1
USP48-209ENST00000487880 OR4S1Q8NGB4 309 aa1.92□□□□□ -2.1
USP48-209ENST00000487880 OR52L1Q8NGH7 329 aa1.92□□□□□ -2.1
USP48-209ENST00000487880 OR13C4Q8NGS5 318 aa1.92□□□□□ -2.1
USP48-209ENST00000487880 OR2Y1Q8NGV0 311 aa1.92□□□□□ -2.1
USP48-209ENST00000487880 OR2T27Q8NH04 317 aa1.92□□□□□ -2.1
USP48-209ENST00000487880 OR5P2Q8WZ92 322 aa1.92□□□□□ -2.1
USP48-209ENST00000487880 ZNF514Q96K75 400 aaPredicted RBP1.92□□□□□ -2.1
USP48-209ENST00000487880 PCBD2Q9H0N5 130 aa1.92□□□□□ -2.1
USP48-209ENST00000487880 OR51I1Q9H343 314 aa1.92□□□□□ -2.1
USP48-209ENST00000487880 PRO1933Q9H354 126 aa1.92□□□□□ -2.1
USP48-209ENST00000487880 RERGLQ9H628 205 aa1.92□□□□□ -2.1
USP48-209ENST00000487880 TAF9BQ9HBM6 251 aa1.92□□□□□ -2.1
USP48-209ENST00000487880 MRPL27Q9P0M9 148 aaKnown RBP1.92□□□□□ -2.1
USP48-209ENST00000487880 NXT1Q9UKK6 140 aaKnown RBP1.92□□□□□ -2.1
USP48-209ENST00000487880 NOP16Q9Y3C1 178 aaKnown RBP1.92□□□□□ -2.1
USP48-209ENST00000487880 LOC285556D6RIA3 1793 aa1.92□□□□□ -2.1
USP48-209ENST00000487880 RALGAPA2Q2PPJ7 1873 aa1.92□□□□□ -2.1
USP48-209ENST00000487880 CHD5Q8TDI0 1954 aa1.92□□□□□ -2.1
USP48-209ENST00000487880 PHIPQ8WWQ0 1821 aa1.91□□□□□ -2.1
USP48-209ENST00000487880 COL14A1Q05707 1796 aaKnown RBP1.91□□□□□ -2.1
USP48-209ENST00000487880 A0A087WUU8 490 aa1.91□□□□□ -2.1
USP48-209ENST00000487880 TGIF2-C20orf24A0A0A6YYL0 155 aa1.91□□□□□ -2.1
USP48-209ENST00000487880 TRAV1-1A0A0B4J248 108 aa1.91□□□□□ -2.1
USP48-209ENST00000487880 TRGV4A0A0C4DH28 118 aa1.91□□□□□ -2.1
USP48-209ENST00000487880 CXorf51AA0A1B0GTR3 108 aa1.91□□□□□ -2.1
USP48-209ENST00000487880 A0A1B0GV72 72 aa1.91□□□□□ -2.1
USP48-209ENST00000487880 TMEM235A6NFC5 223 aa1.91□□□□□ -2.1
USP48-209ENST00000487880 H3BQ15 152 aa1.91□□□□□ -2.1
USP48-209ENST00000487880 PIRO00625 290 aa1.91□□□□□ -2.1
USP48-209ENST00000487880 OR2J2O76002 312 aa1.91□□□□□ -2.1
USP48-209ENST00000487880 CYB5AP00167 134 aa1.91□□□□□ -2.1
USP48-209ENST00000487880 TRGC2P03986 189 aa1.91□□□□□ -2.1
USP48-209ENST00000487880 TYMSP04818 313 aa1.91□□□□□ -2.1
USP48-209ENST00000487880 REG1AP05451 166 aa1.91□□□□□ -2.1
USP48-209ENST00000487880 ESDP10768 282 aa1.91□□□□□ -2.1
USP48-209ENST00000487880 KCNE1P15382 129 aa1.91□□□□□ -2.1
USP48-209ENST00000487880 CDK2P24941 298 aa1.91□□□□□ -2.1
USP48-209ENST00000487880 PYCR1P32322 319 aa1.91□□□□□ -2.1
USP48-209ENST00000487880 TMEM33P57088 247 aa1.91□□□□□ -2.1
USP48-209ENST00000487880 UBE2KP61086 200 aa1.91□□□□□ -2.1
USP48-209ENST00000487880 DEFB103AP81534 67 aa1.91□□□□□ -2.1
USP48-209ENST00000487880 RHOGP84095 191 aa1.91□□□□□ -2.1
USP48-209ENST00000487880 CD164Q04900 197 aa1.91□□□□□ -2.1
USP48-209ENST00000487880 ZNF791Q3KP31 576 aaPredicted RBP1.91□□□□□ -2.1
USP48-209ENST00000487880 TRMT12Q53H54 448 aaKnown RBP1.91□□□□□ -2.1
USP48-209ENST00000487880 TMEM128Q5BJH2 165 aa1.91□□□□□ -2.1
USP48-209ENST00000487880 CST9Q5W186 159 aa1.91□□□□□ -2.1
USP48-209ENST00000487880 Q6ZRU5 148 aa1.91□□□□□ -2.1
USP48-209ENST00000487880 TCF23Q7RTU1 214 aa1.91□□□□□ -2.1
USP48-209ENST00000487880 GLT6D1Q7Z4J2 308 aa1.91□□□□□ -2.1
USP48-209ENST00000487880 FAM19A3Q7Z5A8 133 aa1.91□□□□□ -2.1
USP48-209ENST00000487880 GKN2Q86XP6 184 aa1.91□□□□□ -2.1
USP48-209ENST00000487880 RBM45Q8IUH3 476 aaKnown RBP1.91□□□□□ -2.1
USP48-209ENST00000487880 CLECL1Q8IZS7 167 aa1.91□□□□□ -2.1
USP48-209ENST00000487880 CDRT4Q8N9R6 151 aa1.91□□□□□ -2.1
USP48-209ENST00000487880 GPR32P1Q8NGA4 272 aa1.91□□□□□ -2.1
USP48-209ENST00000487880 OR10P1Q8NGE3 313 aa1.91□□□□□ -2.1
USP48-209ENST00000487880 OR4B1Q8NGF8 309 aa1.91□□□□□ -2.1
USP48-209ENST00000487880 OR51A2Q8NGJ7 313 aa1.91□□□□□ -2.1
USP48-209ENST00000487880 MFSD8Q8NHS3 518 aa1.91□□□□□ -2.1
USP48-209ENST00000487880 Q8WTZ3 238 aa1.91□□□□□ -2.1
USP48-209ENST00000487880 AQP3Q92482 292 aa1.91□□□□□ -2.1
USP48-209ENST00000487880 C2orf50Q96LR7 162 aa1.91□□□□□ -2.1
USP48-209ENST00000487880 PRAP1Q96NZ9 151 aa1.91□□□□□ -2.1
USP48-209ENST00000487880 TP53RKQ96S44 253 aa1.91□□□□□ -2.1
USP48-209ENST00000487880 GINS3Q9BRX5 216 aa1.91□□□□□ -2.1
USP48-209ENST00000487880 FAAP24Q9BTP7 215 aa1.91□□□□□ -2.1
USP48-209ENST00000487880 OR2J1Q9GZK6 312 aa1.91□□□□□ -2.1
USP48-209ENST00000487880 TCEAL2Q9H3H9 227 aaPredicted RBP1.91□□□□□ -2.1
USP48-209ENST00000487880 CMC2Q9NRP2 79 aa1.91□□□□□ -2.1
USP48-209ENST00000487880 FKBP11Q9NYL4 201 aa1.91□□□□□ -2.1
USP48-209ENST00000487880 MRPS16Q9Y3D3 137 aaKnown RBP1.91□□□□□ -2.1
USP48-209ENST00000487880 ARL5AQ9Y689 179 aa1.91□□□□□ -2.1
USP48-209ENST00000487880 NYNRINQ9P2P1 1898 aaKnown RBP1.9□□□□□ -2.1
USP48-209ENST00000487880 PLXNA1Q9UIW2 1896 aa1.9□□□□□ -2.1
USP48-209ENST00000487880 MYLKQ15746 1914 aa1.9□□□□□ -2.11
USP48-209ENST00000487880 TRAV9-1A0A075B6T8 112 aa1.9□□□□□ -2.11
USP48-209ENST00000487880 PIGBOS1A0A0B4J2F0 54 aa1.9□□□□□ -2.11
USP48-209ENST00000487880 MAP1LC3B2A6NCE7 125 aa1.9□□□□□ -2.11
USP48-209ENST00000487880 OR6C6A6NF89 314 aa1.9□□□□□ -2.11
USP48-209ENST00000487880 A6NIN4 97 aa1.9□□□□□ -2.11
USP48-209ENST00000487880 TMEM212A6NML5 194 aa1.9□□□□□ -2.11
USP48-209ENST00000487880 RIIAD1A6NNX1 92 aa1.9□□□□□ -2.11
USP48-209ENST00000487880 ZNF736B4DX44 427 aaPredicted RBP1.9□□□□□ -2.11
USP48-209ENST00000487880 J3QLW9 94 aa1.9□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms