RNA–Protein interactions for RNA: ENST00000487311.1

SRRT-212, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-212ENST00000487311 MAPKAPK5-AS1Q8N8E1 139 aa11.32□□□□□ -0.6
SRRT-212ENST00000487311 SCGB3A2Q96PL1 93 aa11.32□□□□□ -0.6
SRRT-212ENST00000487311 SLC25A39Q9BZJ4 359 aaPredicted RBP11.32□□□□□ -0.6
SRRT-212ENST00000487311 MCUBQ9NWR8 336 aa11.32□□□□□ -0.6
SRRT-212ENST00000487311 LINC00588Q9Y4M8 146 aa11.32□□□□□ -0.6
SRRT-212ENST00000487311 ALDH3B2P48448 385 aa11.31□□□□□ -0.6
SRRT-212ENST00000487311 SAMD13Q5VXD3 122 aa11.31□□□□□ -0.6
SRRT-212ENST00000487311 OR4D5Q8NGN0 318 aa11.31□□□□□ -0.6
SRRT-212ENST00000487311 SOSTQ9BQB4 213 aa11.31□□□□□ -0.6
SRRT-212ENST00000487311 DUSP14O95147 198 aaKnown RBP11.3□□□□□ -0.6
SRRT-212ENST00000487311 TSPOP30536 169 aa11.3□□□□□ -0.6
SRRT-212ENST00000487311 FGL1Q08830 312 aa11.3□□□□□ -0.6
SRRT-212ENST00000487311 OR1B1Q8NGR6 318 aa11.3□□□□□ -0.6
SRRT-212ENST00000487311 SLC45A2Q9UMX9 530 aa11.3□□□□□ -0.6
SRRT-212ENST00000487311 WRBO00258 174 aa11.29□□□□□ -0.6
SRRT-212ENST00000487311 CFDP00746 253 aaPredicted RBP11.29□□□□□ -0.6
SRRT-212ENST00000487311 INSP01308 110 aa11.29□□□□□ -0.6
SRRT-212ENST00000487311 ANXA3P12429 323 aa11.29□□□□□ -0.6
SRRT-212ENST00000487311 DYNC2LI1Q8TCX1 351 aa11.29□□□□□ -0.6
SRRT-212ENST00000487311 RNF141Q8WVD5 230 aa11.29□□□□□ -0.6
SRRT-212ENST00000487311 CBY3A6NI87 242 aa11.28□□□□□ -0.6
SRRT-212ENST00000487311 HTN1P15515 57 aa11.28□□□□□ -0.6
SRRT-212ENST00000487311 SRPXP78539 464 aa11.28□□□□□ -0.6
SRRT-212ENST00000487311 GPR141Q7Z602 305 aa11.28□□□□□ -0.6
SRRT-212ENST00000487311 TMED4Q7Z7H5 227 aa11.28□□□□□ -0.6
SRRT-212ENST00000487311 BPIFCQ8NFQ6 507 aa11.28□□□□□ -0.6
SRRT-212ENST00000487311 LINC01587Q99440 93 aa11.28□□□□□ -0.6
SRRT-212ENST00000487311 DUXBA0A1W2PPF3 345 aa11.27□□□□□ -0.61
SRRT-212ENST00000487311 H3BRN7 92 aa11.27□□□□□ -0.61
SRRT-212ENST00000487311 SYNGR2O43760 224 aa11.27□□□□□ -0.61
SRRT-212ENST00000487311 ATP5G1P05496 136 aa11.27□□□□□ -0.61
SRRT-212ENST00000487311 SLC25A6P12236 298 aa11.27□□□□□ -0.61
SRRT-212ENST00000487311 TNFSF8P32971 234 aa11.27□□□□□ -0.61
SRRT-212ENST00000487311 ATP5G3P48201 142 aa11.27□□□□□ -0.61
SRRT-212ENST00000487311 CCL18P55774 89 aa11.27□□□□□ -0.61
SRRT-212ENST00000487311 B2MP61769 119 aa11.27□□□□□ -0.61
SRRT-212ENST00000487311 TMEM128Q5BJH2 165 aa11.27□□□□□ -0.61
SRRT-212ENST00000487311 SPANXN5Q5MJ07 72 aa11.27□□□□□ -0.61
SRRT-212ENST00000487311 LRTM2Q8N967 370 aa11.27□□□□□ -0.61
SRRT-212ENST00000487311 ZNF738Q8NE65 137 aa11.27□□□□□ -0.61
SRRT-212ENST00000487311 TMEM147Q9BVK8 224 aa11.27□□□□□ -0.61
SRRT-212ENST00000487311 KRTAP1-5Q9BYS1 174 aa11.27□□□□□ -0.61
SRRT-212ENST00000487311 RABL2AQ9UBK7 228 aaPredicted RBP11.27□□□□□ -0.61
SRRT-212ENST00000487311 RABL2BQ9UNT1 228 aa11.27□□□□□ -0.61
SRRT-212ENST00000487311 H3BP45 60 aa11.26□□□□□ -0.61
SRRT-212ENST00000487311 BOLA2-SMG1P6H3BVE0 249 aa11.26□□□□□ -0.61
SRRT-212ENST00000487311 MED6O75586 246 aa11.26□□□□□ -0.61
SRRT-212ENST00000487311 KIR3DS1Q14943 382 aa11.26□□□□□ -0.61
SRRT-212ENST00000487311 SSX7Q7RTT5 188 aa11.26□□□□□ -0.61
SRRT-212ENST00000487311 SPATA12Q7Z6I5 190 aa11.26□□□□□ -0.61
SRRT-212ENST00000487311 Q8N1X5 172 aa11.26□□□□□ -0.61
SRRT-212ENST00000487311 OR8A1Q8NGG7 326 aa11.26□□□□□ -0.61
SRRT-212ENST00000487311 GPR82Q96P67 336 aa11.26□□□□□ -0.61
SRRT-212ENST00000487311 UHRF2Q96PU4 802 aa11.26□□□□□ -0.61
SRRT-212ENST00000487311 SHANK2-AS3Q9BTD1 123 aa11.26□□□□□ -0.61
SRRT-212ENST00000487311 Q9H8V8 135 aa11.26□□□□□ -0.61
SRRT-212ENST00000487311 RSL24D1Q9UHA3 163 aaKnown RBP11.26□□□□□ -0.61
SRRT-212ENST00000487311 FABP12A6NFH5 140 aa11.25□□□□□ -0.61
SRRT-212ENST00000487311 HOXB5P09067 269 aa11.25□□□□□ -0.61
SRRT-212ENST00000487311 CXCL3P19876 107 aa11.25□□□□□ -0.61
SRRT-212ENST00000487311 VAMP1P23763 118 aa11.25□□□□□ -0.61
SRRT-212ENST00000487311 TAS2R60P59551 318 aa11.25□□□□□ -0.61
SRRT-212ENST00000487311 RHOBP62745 196 aa11.25□□□□□ -0.61
SRRT-212ENST00000487311 HIST1H1AQ02539 215 aaPredicted RBP11.25□□□□□ -0.61
SRRT-212ENST00000487311 AKR1C1Q04828 323 aa11.25□□□□□ -0.61
SRRT-212ENST00000487311 CYP2G1PQ6ZSU1 146 aa11.25□□□□□ -0.61
SRRT-212ENST00000487311 ACOT7LQ6ZUV0 252 aa11.25□□□□□ -0.61
SRRT-212ENST00000487311 TMEM144Q7Z5S9 345 aa11.25□□□□□ -0.61
SRRT-212ENST00000487311 CIB3Q96Q77 187 aaPredicted RBP11.25□□□□□ -0.61
SRRT-212ENST00000487311 SLIRPQ9GZT3 109 aaKnown RBP11.25□□□□□ -0.61
SRRT-212ENST00000487311 NOP10Q9NPE3 64 aaKnown RBP11.25□□□□□ -0.61
SRRT-212ENST00000487311 CCDC59Q9P031 241 aaKnown RBP11.25□□□□□ -0.61
SRRT-212ENST00000487311 PMS2P5A8MQ11 134 aa11.24□□□□□ -0.61
SRRT-212ENST00000487311 KRTAP10-2P60368 255 aa11.24□□□□□ -0.61
SRRT-212ENST00000487311 RPP30P78346 268 aaKnown RBP11.24□□□□□ -0.61
SRRT-212ENST00000487311 PPP1R1AQ13522 171 aa11.24□□□□□ -0.61
SRRT-212ENST00000487311 PSG3Q16557 428 aa11.24□□□□□ -0.61
SRRT-212ENST00000487311 PATE2Q6UY27 113 aa11.24□□□□□ -0.61
SRRT-212ENST00000487311 SCRT2Q9NQ03 307 aa11.24□□□□□ -0.61
SRRT-212ENST00000487311 TIMM8BQ9Y5J9 83 aaPredicted RBP11.24□□□□□ -0.61
SRRT-212ENST00000487311 CCNKO75909 580 aa11.23□□□□□ -0.61
SRRT-212ENST00000487311 SFT2D2O95562 160 aa11.23□□□□□ -0.61
SRRT-212ENST00000487311 IL5P05113 134 aa11.23□□□□□ -0.61
SRRT-212ENST00000487311 SNRPCP09234 159 aaKnown RBP11.23□□□□□ -0.61
SRRT-212ENST00000487311 TMEM256Q8N2U0 113 aa11.23□□□□□ -0.61
SRRT-212ENST00000487311 RNASE8Q8TDE3 154 aaKnown RBP11.23□□□□□ -0.61
SRRT-212ENST00000487311 C16orf74Q96GX8 76 aa11.23□□□□□ -0.61
SRRT-212ENST00000487311 MRPS26Q9BYN8 205 aaKnown RBP11.23□□□□□ -0.61
SRRT-212ENST00000487311 HIGD1AQ9Y241 93 aa11.23□□□□□ -0.61
SRRT-212ENST00000487311 STRAPQ9Y3F4 350 aaKnown RBP11.23□□□□□ -0.61
SRRT-212ENST00000487311 A0A087X0K7 114 aa11.22□□□□□ -0.61
SRRT-212ENST00000487311 MRPS12O15235 138 aaKnown RBP11.22□□□□□ -0.61
SRRT-212ENST00000487311 HYPMO75409 117 aa11.22□□□□□ -0.61
SRRT-212ENST00000487311 OR5G3P0C626 314 aa11.22□□□□□ -0.61
SRRT-212ENST00000487311 RPL7P18124 248 aaKnown RBP11.22□□□□□ -0.61
SRRT-212ENST00000487311 PLP1P60201 277 aa11.22□□□□□ -0.61
SRRT-212ENST00000487311 POLR2GP62487 172 aaKnown RBP eCLIP11.22□□□□□ -0.61
SRRT-212ENST00000487311 ID3Q02535 119 aa11.22□□□□□ -0.61
SRRT-212ENST00000487311 OR5I1Q13606 314 aa11.22□□□□□ -0.61
SRRT-212ENST00000487311 CLINT1Q14677 625 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms