RNA–Protein interactions for RNA: ENST00000487215.1

SMPDL3A-202, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2

Gene SMPDL3A, Length 903 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-202ENST00000487215 RPP30P78346 268 aaKnown RBP13.63□□□□□ -0.23
SMPDL3A-202ENST00000487215 C17orf77Q96MU5 243 aa13.63□□□□□ -0.23
SMPDL3A-202ENST00000487215 SLC25A32Q9H2D1 315 aa13.63□□□□□ -0.23
SMPDL3A-202ENST00000487215 F5H768 121 aa13.62□□□□□ -0.23
SMPDL3A-202ENST00000487215 CRXO43186 299 aaPredicted RBP13.62□□□□□ -0.23
SMPDL3A-202ENST00000487215 SPINK13Q1W4C9 94 aa13.62□□□□□ -0.23
SMPDL3A-202ENST00000487215 TMED4Q7Z7H5 227 aa13.62□□□□□ -0.23
SMPDL3A-202ENST00000487215 TOMM5Q8N4H5 51 aa13.62□□□□□ -0.23
SMPDL3A-202ENST00000487215 CIB3Q96Q77 187 aaPredicted RBP13.62□□□□□ -0.23
SMPDL3A-202ENST00000487215 TRGV9Q99603 122 aa13.62□□□□□ -0.23
SMPDL3A-202ENST00000487215 SLC25A21Q9BQT8 299 aaPredicted RBP13.62□□□□□ -0.23
SMPDL3A-202ENST00000487215 LINC00588Q9Y4M8 146 aa13.62□□□□□ -0.23
SMPDL3A-202ENST00000487215 M0R2Z0 102 aa13.61□□□□□ -0.23
SMPDL3A-202ENST00000487215 CFDP00746 253 aaPredicted RBP13.61□□□□□ -0.23
SMPDL3A-202ENST00000487215 INSP01308 110 aa13.61□□□□□ -0.23
SMPDL3A-202ENST00000487215 GALR1P47211 349 aa13.61□□□□□ -0.23
SMPDL3A-202ENST00000487215 CNN1P51911 297 aaKnown RBP13.61□□□□□ -0.23
SMPDL3A-202ENST00000487215 PYDC2Q56P42 97 aa13.61□□□□□ -0.23
SMPDL3A-202ENST00000487215 LRTM2Q8N967 370 aa13.61□□□□□ -0.23
SMPDL3A-202ENST00000487215 OR11H7Q8NGC8 314 aa13.61□□□□□ -0.23
SMPDL3A-202ENST00000487215 SLC25A22Q9H936 323 aa13.61□□□□□ -0.23
SMPDL3A-202ENST00000487215 IGKV1OR2-108A0A075B7D4 117 aa13.6□□□□□ -0.23
SMPDL3A-202ENST00000487215 PLAC8L1A1L4L8 177 aa13.6□□□□□ -0.23
SMPDL3A-202ENST00000487215 PITX3O75364 302 aa13.6□□□□□ -0.23
SMPDL3A-202ENST00000487215 TSPOP30536 169 aa13.6□□□□□ -0.23
SMPDL3A-202ENST00000487215 S100A7P31151 101 aa13.6□□□□□ -0.23
SMPDL3A-202ENST00000487215 S100A5P33763 92 aa13.6□□□□□ -0.23
SMPDL3A-202ENST00000487215 CCL18P55774 89 aa13.6□□□□□ -0.23
SMPDL3A-202ENST00000487215 FCN2Q15485 313 aa13.6□□□□□ -0.23
SMPDL3A-202ENST00000487215 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.6□□□□□ -0.23
SMPDL3A-202ENST00000487215 SPATA12Q7Z6I5 190 aa13.6□□□□□ -0.23
SMPDL3A-202ENST00000487215 RSG1Q9BU20 258 aa13.6□□□□□ -0.23
SMPDL3A-202ENST00000487215 SCRT2Q9NQ03 307 aa13.6□□□□□ -0.23
SMPDL3A-202ENST00000487215 HERC1Q15751 4861 aa13.59□□□□□ -0.23
SMPDL3A-202ENST00000487215 DUSP14O95147 198 aaKnown RBP13.59□□□□□ -0.23
SMPDL3A-202ENST00000487215 AZU1P20160 251 aa13.59□□□□□ -0.23
SMPDL3A-202ENST00000487215 VAMP1P23763 118 aa13.59□□□□□ -0.23
SMPDL3A-202ENST00000487215 GGNBP1Q5YKI7 109 aa13.59□□□□□ -0.23
SMPDL3A-202ENST00000487215 BAP18Q8IXM2 172 aa13.59□□□□□ -0.23
SMPDL3A-202ENST00000487215 THAP8Q8NA92 274 aa13.59□□□□□ -0.23
SMPDL3A-202ENST00000487215 PAIP2BQ9ULR5 123 aaKnown RBP13.59□□□□□ -0.23
SMPDL3A-202ENST00000487215 ZNF98A6NK75 572 aa13.58□□□□□ -0.24
SMPDL3A-202ENST00000487215 ATP5G1P05496 136 aa13.58□□□□□ -0.24
SMPDL3A-202ENST00000487215 ATP5G3P48201 142 aa13.58□□□□□ -0.24
SMPDL3A-202ENST00000487215 B2MP61769 119 aa13.58□□□□□ -0.24
SMPDL3A-202ENST00000487215 IGFL4Q6B9Z1 124 aa13.58□□□□□ -0.24
SMPDL3A-202ENST00000487215 RNF141Q8WVD5 230 aa13.58□□□□□ -0.24
SMPDL3A-202ENST00000487215 TRAV8-2A0A0B4J237 113 aa13.57□□□□□ -0.24
SMPDL3A-202ENST00000487215 TRIM63Q969Q1 353 aa13.57□□□□□ -0.24
SMPDL3A-202ENST00000487215 SLC45A2Q9UMX9 530 aa13.57□□□□□ -0.24
SMPDL3A-202ENST00000487215 TRAV12-2A0A075B6T6 113 aa13.56□□□□□ -0.24
SMPDL3A-202ENST00000487215 CBY3A6NI87 242 aa13.56□□□□□ -0.24
SMPDL3A-202ENST00000487215 IAPPP10997 89 aa13.56□□□□□ -0.24
SMPDL3A-202ENST00000487215 SSX7Q7RTT5 188 aa13.56□□□□□ -0.24
SMPDL3A-202ENST00000487215 RNF182Q8N6D2 247 aa13.56□□□□□ -0.24
SMPDL3A-202ENST00000487215 OR4D5Q8NGN0 318 aa13.56□□□□□ -0.24
SMPDL3A-202ENST00000487215 OR1B1Q8NGR6 318 aa13.56□□□□□ -0.24
SMPDL3A-202ENST00000487215 SYNGR2O43760 224 aa13.55□□□□□ -0.24
SMPDL3A-202ENST00000487215 SFT2D2O95562 160 aa13.55□□□□□ -0.24
SMPDL3A-202ENST00000487215 UBE2MP61081 183 aaKnown RBP13.55□□□□□ -0.24
SMPDL3A-202ENST00000487215 CLINT1Q14677 625 aa13.55□□□□□ -0.24
SMPDL3A-202ENST00000487215 KRTAP1-5Q9BYS1 174 aa13.55□□□□□ -0.24
SMPDL3A-202ENST00000487215 SLC25A39Q9BZJ4 359 aaPredicted RBP13.55□□□□□ -0.24
SMPDL3A-202ENST00000487215 BOLA2-SMG1P6H3BVE0 249 aa13.54□□□□□ -0.24
SMPDL3A-202ENST00000487215 ORM2P19652 201 aa13.54□□□□□ -0.24
SMPDL3A-202ENST00000487215 GATA2P23769 480 aaPredicted RBP13.54□□□□□ -0.24
SMPDL3A-202ENST00000487215 TMEM182Q6ZP80 229 aaPredicted RBP13.54□□□□□ -0.24
SMPDL3A-202ENST00000487215 BPIFCQ8NFQ6 507 aa13.54□□□□□ -0.24
SMPDL3A-202ENST00000487215 GPR82Q96P67 336 aa13.54□□□□□ -0.24
SMPDL3A-202ENST00000487215 Q9H8V8 135 aa13.54□□□□□ -0.24
SMPDL3A-202ENST00000487215 V9GYH0 126 aa13.54□□□□□ -0.24
SMPDL3A-202ENST00000487215 CCDC160A6NGH7 325 aa13.53□□□□□ -0.24
SMPDL3A-202ENST00000487215 KRTAP10-2P60368 255 aa13.53□□□□□ -0.24
SMPDL3A-202ENST00000487215 FGL1Q08830 312 aa13.53□□□□□ -0.24
SMPDL3A-202ENST00000487215 PPP1R1AQ13522 171 aa13.53□□□□□ -0.24
SMPDL3A-202ENST00000487215 LINC01587Q99440 93 aa13.53□□□□□ -0.24
SMPDL3A-202ENST00000487215 TMEM147Q9BVK8 224 aa13.53□□□□□ -0.24
SMPDL3A-202ENST00000487215 PRSS46E5RG02 174 aa13.52□□□□□ -0.25
SMPDL3A-202ENST00000487215 WRBO00258 174 aa13.52□□□□□ -0.25
SMPDL3A-202ENST00000487215 HOXB5P09067 269 aa13.52□□□□□ -0.25
SMPDL3A-202ENST00000487215 TAS2R60P59551 318 aa13.52□□□□□ -0.25
SMPDL3A-202ENST00000487215 SPANXN2Q5MJ10 180 aa13.52□□□□□ -0.25
SMPDL3A-202ENST00000487215 ZNF738Q8NE65 137 aa13.52□□□□□ -0.25
SMPDL3A-202ENST00000487215 C16orf74Q96GX8 76 aa13.52□□□□□ -0.25
SMPDL3A-202ENST00000487215 STRAPQ9Y3F4 350 aaKnown RBP13.52□□□□□ -0.25
SMPDL3A-202ENST00000487215 INPP1P49441 399 aa13.51□□□□□ -0.25
SMPDL3A-202ENST00000487215 HIST1H1AQ02539 215 aaPredicted RBP13.51□□□□□ -0.25
SMPDL3A-202ENST00000487215 AKR1C1Q04828 323 aa13.51□□□□□ -0.25
SMPDL3A-202ENST00000487215 TTC32Q5I0X7 151 aa13.51□□□□□ -0.25
SMPDL3A-202ENST00000487215 SPANXN5Q5MJ07 72 aa13.51□□□□□ -0.25
SMPDL3A-202ENST00000487215 TMEM256Q8N2U0 113 aa13.51□□□□□ -0.25
SMPDL3A-202ENST00000487215 TIMM8BQ9Y5J9 83 aaPredicted RBP13.51□□□□□ -0.25
SMPDL3A-202ENST00000487215 NAP1L6A6NFF2 107 aa13.5□□□□□ -0.25
SMPDL3A-202ENST00000487215 H3BRN7 92 aa13.5□□□□□ -0.25
SMPDL3A-202ENST00000487215 HTN1P15515 57 aa13.5□□□□□ -0.25
SMPDL3A-202ENST00000487215 RHOBP62745 196 aa13.5□□□□□ -0.25
SMPDL3A-202ENST00000487215 S100A7AQ86SG5 101 aa13.5□□□□□ -0.25
SMPDL3A-202ENST00000487215 CCDC190Q86UF4 302 aa13.5□□□□□ -0.25
SMPDL3A-202ENST00000487215 UHRF2Q96PU4 802 aa13.5□□□□□ -0.25
SMPDL3A-202ENST00000487215 Q9H3A6 140 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms