RNA–Protein interactions for RNA: ENST00000486618.1

HDAC3-209, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-209ENST00000486618 PRO1933Q9H354 126 aa5.23□□□□□ -1.57
HDAC3-209ENST00000486618 MOB4Q9Y3A3 225 aa5.23□□□□□ -1.57
HDAC3-209ENST00000486618 COX11Q9Y6N1 276 aa5.23□□□□□ -1.57
HDAC3-209ENST00000486618 RYR2Q92736 4967 aa5.23□□□□□ -1.57
HDAC3-209ENST00000486618 ARRDC5A6NEK1 342 aa5.22□□□□□ -1.57
HDAC3-209ENST00000486618 C9JAW5 83 aa5.22□□□□□ -1.57
HDAC3-209ENST00000486618 ZNF670-ZNF695F2Z2N8 137 aa5.22□□□□□ -1.57
HDAC3-209ENST00000486618 ZNF737O75373 536 aa5.22□□□□□ -1.57
HDAC3-209ENST00000486618 JTBO76095 146 aa5.22□□□□□ -1.57
HDAC3-209ENST00000486618 ELANEP08246 267 aa5.22□□□□□ -1.57
HDAC3-209ENST00000486618 S100A10P60903 97 aa5.22□□□□□ -1.57
HDAC3-209ENST00000486618 PMAIP1Q13794 54 aa5.22□□□□□ -1.57
HDAC3-209ENST00000486618 RBM39Q14498 530 aaKnown RBP5.22□□□□□ -1.57
HDAC3-209ENST00000486618 ZNF260Q3ZCT1 412 aa5.22□□□□□ -1.57
HDAC3-209ENST00000486618 FAM74A1Q5RGS3 127 aa5.22□□□□□ -1.57
HDAC3-209ENST00000486618 GLT8D1Q68CQ7 371 aa5.22□□□□□ -1.57
HDAC3-209ENST00000486618 Q6ZWC4 215 aa5.22□□□□□ -1.57
HDAC3-209ENST00000486618 Q75L30 129 aa5.22□□□□□ -1.57
HDAC3-209ENST00000486618 NEGR1Q7Z3B1 354 aa5.22□□□□□ -1.57
HDAC3-209ENST00000486618 GAPTQ8N292 157 aa5.22□□□□□ -1.57
HDAC3-209ENST00000486618 GVQW1Q8N7I0 195 aa5.22□□□□□ -1.57
HDAC3-209ENST00000486618 OR8D4Q8NGM9 314 aa5.22□□□□□ -1.57
HDAC3-209ENST00000486618 OR51E1Q8TCB6 317 aa5.22□□□□□ -1.57
HDAC3-209ENST00000486618 SECTM1Q8WVN6 248 aa5.22□□□□□ -1.57
HDAC3-209ENST00000486618 IL1F10Q8WWZ1 152 aa5.22□□□□□ -1.57
HDAC3-209ENST00000486618 ARPC1AQ92747 370 aa5.22□□□□□ -1.57
HDAC3-209ENST00000486618 TMEM101Q96IK0 257 aa5.22□□□□□ -1.57
HDAC3-209ENST00000486618 ZNF436Q9C0F3 470 aaPredicted RBP5.22□□□□□ -1.57
HDAC3-209ENST00000486618 PBOV1Q9GZY1 135 aa5.22□□□□□ -1.57
HDAC3-209ENST00000486618 MRPL27Q9P0M9 148 aaKnown RBP5.22□□□□□ -1.57
HDAC3-209ENST00000486618 ANXA10Q9UJ72 324 aa5.22□□□□□ -1.57
HDAC3-209ENST00000486618 HIGD1AQ9Y241 93 aa5.22□□□□□ -1.57
HDAC3-209ENST00000486618 EPPK1P58107 5090 aaKnown RBP5.21□□□□□ -1.57
HDAC3-209ENST00000486618 TRGV10A0A0A0MS01 117 aa5.21□□□□□ -1.58
HDAC3-209ENST00000486618 A0A0A6YYD4 124 aa5.21□□□□□ -1.58
HDAC3-209ENST00000486618 FAM236DA0A1B0GTK5 79 aa5.21□□□□□ -1.58
HDAC3-209ENST00000486618 TEX50A0A1B0GTY4 177 aa5.21□□□□□ -1.58
HDAC3-209ENST00000486618 DUXBA0A1W2PPF3 345 aa5.21□□□□□ -1.58
HDAC3-209ENST00000486618 BUB1B-PAK6H3BSN5 160 aa5.21□□□□□ -1.58
HDAC3-209ENST00000486618 MGST3O14880 152 aa5.21□□□□□ -1.58
HDAC3-209ENST00000486618 IGLV1-47P01700 117 aa5.21□□□□□ -1.58
HDAC3-209ENST00000486618 IGHG2P01859 326 aa5.21□□□□□ -1.58
HDAC3-209ENST00000486618 REG1AP05451 166 aa5.21□□□□□ -1.58
HDAC3-209ENST00000486618 FAM236CP0DP71 79 aa5.21□□□□□ -1.58
HDAC3-209ENST00000486618 SUB1P53999 127 aaKnown RBP eCLIP5.21□□□□□ -1.58
HDAC3-209ENST00000486618 ZNF266Q14584 549 aa5.21□□□□□ -1.58
HDAC3-209ENST00000486618 Q5BKY6 102 aa5.21□□□□□ -1.58
HDAC3-209ENST00000486618 CGB2Q6NT52 195 aa5.21□□□□□ -1.58
HDAC3-209ENST00000486618 HEPN1Q6WQI6 88 aa5.21□□□□□ -1.58
HDAC3-209ENST00000486618 TMUB2Q71RG4 321 aa5.21□□□□□ -1.58
HDAC3-209ENST00000486618 TCF23Q7RTU1 214 aa5.21□□□□□ -1.58
HDAC3-209ENST00000486618 SLC35E3Q7Z769 313 aa5.21□□□□□ -1.58
HDAC3-209ENST00000486618 Q8IYB0 196 aa5.21□□□□□ -1.58
HDAC3-209ENST00000486618 GBGT1Q8N5D6 347 aa5.21□□□□□ -1.58
HDAC3-209ENST00000486618 DRAM1Q8N682 238 aa5.21□□□□□ -1.58
HDAC3-209ENST00000486618 YIPF7Q8N8F6 280 aa5.21□□□□□ -1.58
HDAC3-209ENST00000486618 C11orf45Q8TAV5 145 aa5.21□□□□□ -1.58
HDAC3-209ENST00000486618 TMEM106AQ96A25 262 aa5.21□□□□□ -1.58
HDAC3-209ENST00000486618 PHYHIPLQ96FC7 376 aa5.21□□□□□ -1.58
HDAC3-209ENST00000486618 BORCS8Q96FH0 119 aa5.21□□□□□ -1.58
HDAC3-209ENST00000486618 CHST6Q9GZX3 395 aa5.21□□□□□ -1.58
HDAC3-209ENST00000486618 GTSF1LQ9H1H1 148 aa5.21□□□□□ -1.58
HDAC3-209ENST00000486618 MED28Q9H204 178 aa5.21□□□□□ -1.58
HDAC3-209ENST00000486618 MOB1AQ9H8S9 216 aa5.21□□□□□ -1.58
HDAC3-209ENST00000486618 TVP23BQ9NYZ1 205 aa5.21□□□□□ -1.58
HDAC3-209ENST00000486618 COMMD3Q9UBI1 195 aa5.21□□□□□ -1.58
HDAC3-209ENST00000486618 TNCP24821 2201 aa5.2□□□□□ -1.58
HDAC3-209ENST00000486618 ZNF207O43670 478 aaKnown RBP5.2□□□□□ -1.58
HDAC3-209ENST00000486618 LALBAP00709 142 aa5.2□□□□□ -1.58
HDAC3-209ENST00000486618 MAS1P04201 325 aa5.2□□□□□ -1.58
HDAC3-209ENST00000486618 SCTP09683 121 aa5.2□□□□□ -1.58
HDAC3-209ENST00000486618 FRMD6-AS1P0C7T7 363 aa5.2□□□□□ -1.58
HDAC3-209ENST00000486618 AKAIN1P0CW23 69 aa5.2□□□□□ -1.58
HDAC3-209ENST00000486618 TSPOP30536 169 aa5.2□□□□□ -1.58
HDAC3-209ENST00000486618 HSD52Q0P140 79 aa5.2□□□□□ -1.58
HDAC3-209ENST00000486618 HES1Q14469 280 aa5.2□□□□□ -1.58
HDAC3-209ENST00000486618 JOSD1Q15040 202 aaPredicted RBP5.2□□□□□ -1.58
HDAC3-209ENST00000486618 DEFB136Q30KP8 78 aa5.2□□□□□ -1.58
HDAC3-209ENST00000486618 KRTAP15-1Q3LI76 137 aa5.2□□□□□ -1.58
HDAC3-209ENST00000486618 KRTAP5-3Q6L8H2 238 aa5.2□□□□□ -1.58
HDAC3-209ENST00000486618 AMIGO2Q86SJ2 522 aa5.2□□□□□ -1.58
HDAC3-209ENST00000486618 ZNF429Q86V71 674 aa5.2□□□□□ -1.58
HDAC3-209ENST00000486618 C5orf56Q8N8D9 126 aa5.2□□□□□ -1.58
HDAC3-209ENST00000486618 TMEM229BQ8NBD8 167 aa5.2□□□□□ -1.58
HDAC3-209ENST00000486618 PP6455Q8WZ26 134 aa5.2□□□□□ -1.58
HDAC3-209ENST00000486618 TMEM18Q96B42 140 aa5.2□□□□□ -1.58
HDAC3-209ENST00000486618 SEC22AQ96IW7 307 aa5.2□□□□□ -1.58
HDAC3-209ENST00000486618 GINS4Q9BRT9 223 aa5.2□□□□□ -1.58
HDAC3-209ENST00000486618 RNASE7Q9H1E1 156 aaKnown RBP5.2□□□□□ -1.58
HDAC3-209ENST00000486618 LINC00527Q9UJ94 153 aa5.2□□□□□ -1.58
HDAC3-209ENST00000486618 AMMECR1Q9Y4X0 333 aaPredicted RBP5.2□□□□□ -1.58
HDAC3-209ENST00000486618 DNAH7Q8WXX0 4024 aa5.2□□□□□ -1.58
HDAC3-209ENST00000486618 LOC102724200A0A096LPH7 203 aaPredicted RBP5.19□□□□□ -1.58
HDAC3-209ENST00000486618 A6NDN8 102 aa5.19□□□□□ -1.58
HDAC3-209ENST00000486618 LY6LH3BQJ8 138 aa5.19□□□□□ -1.58
HDAC3-209ENST00000486618 MPC2O95563 127 aa5.19□□□□□ -1.58
HDAC3-209ENST00000486618 IGLV3-1P01715 115 aa5.19□□□□□ -1.58
HDAC3-209ENST00000486618 APOC3P02656 99 aa5.19□□□□□ -1.58
HDAC3-209ENST00000486618 CSN2P05814 226 aa5.19□□□□□ -1.58
HDAC3-209ENST00000486618 LGALS1P09382 135 aaKnown RBP5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms