RNA–Protein interactions for RNA: ENST00000486210.1

MCF2L-226, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 548 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-226ENST00000486210 SLC39A9Q9NUM3 307 aa13.12□□□□□ -0.31
MCF2L-226ENST00000486210 A0A0D9SG52 128 aa13.11□□□□□ -0.31
MCF2L-226ENST00000486210 ZNF785A8K8V0 405 aa13.11□□□□□ -0.31
MCF2L-226ENST00000486210 ZNF266Q14584 549 aa13.11□□□□□ -0.31
MCF2L-226ENST00000486210 ZFP69Q49AA0 526 aa13.11□□□□□ -0.31
MCF2L-226ENST00000486210 TMUB2Q71RG4 321 aa13.11□□□□□ -0.31
MCF2L-226ENST00000486210 HSD17B11Q8NBQ5 300 aa13.11□□□□□ -0.31
MCF2L-226ENST00000486210 RNF2Q99496 336 aa13.11□□□□□ -0.31
MCF2L-226ENST00000486210 RBMY1BA6NDE4 496 aaKnown RBP13.1□□□□□ -0.31
MCF2L-226ENST00000486210 RBMY1EA6NEQ0 496 aaKnown RBP13.1□□□□□ -0.31
MCF2L-226ENST00000486210 HYPMO75409 117 aa13.1□□□□□ -0.31
MCF2L-226ENST00000486210 OR5G3P0C626 314 aa13.1□□□□□ -0.31
MCF2L-226ENST00000486210 RBMY1DP0C7P1 496 aaKnown RBP13.1□□□□□ -0.31
MCF2L-226ENST00000486210 GCSAMLQ5JQS6 135 aa13.1□□□□□ -0.31
MCF2L-226ENST00000486210 TMEM37Q8WXS4 190 aa13.1□□□□□ -0.31
MCF2L-226ENST00000486210 ARPC5LQ9BPX5 153 aa13.1□□□□□ -0.31
MCF2L-226ENST00000486210 WFDC10AQ9H1F0 79 aa13.1□□□□□ -0.31
MCF2L-226ENST00000486210 TAAR5O14804 337 aa13.09□□□□□ -0.31
MCF2L-226ENST00000486210 BUB3O43684 328 aa13.09□□□□□ -0.31
MCF2L-226ENST00000486210 LY6G6CO95867 125 aa13.09□□□□□ -0.31
MCF2L-226ENST00000486210 ATP6V0CP27449 155 aa13.09□□□□□ -0.31
MCF2L-226ENST00000486210 NKX2-5P52952 324 aaPredicted RBP13.09□□□□□ -0.31
MCF2L-226ENST00000486210 LAMTOR1Q6IAA8 161 aa13.09□□□□□ -0.31
MCF2L-226ENST00000486210 C16orf54Q6UWD8 224 aa13.09□□□□□ -0.31
MCF2L-226ENST00000486210 ZNF709Q8N972 641 aa13.09□□□□□ -0.31
MCF2L-226ENST00000486210 UHRF2Q96PU4 802 aa13.09□□□□□ -0.31
MCF2L-226ENST00000486210 ARV1Q9H2C2 271 aa13.09□□□□□ -0.31
MCF2L-226ENST00000486210 HIGD1AQ9Y241 93 aa13.09□□□□□ -0.31
MCF2L-226ENST00000486210 BORCS7-ASMTA0A0B4J1R7 106 aa13.08□□□□□ -0.32
MCF2L-226ENST00000486210 C17orf112F2Z3M2 114 aa13.08□□□□□ -0.32
MCF2L-226ENST00000486210 H3BRN7 92 aa13.08□□□□□ -0.32
MCF2L-226ENST00000486210 BCL2L11O43521 198 aa13.08□□□□□ -0.32
MCF2L-226ENST00000486210 PFDN1O60925 122 aa13.08□□□□□ -0.32
MCF2L-226ENST00000486210 MORN5Q5VZ52 161 aa13.08□□□□□ -0.32
MCF2L-226ENST00000486210 FAM90A2PQ658T7 463 aa13.08□□□□□ -0.32
MCF2L-226ENST00000486210 LEMD1Q68G75 181 aa13.08□□□□□ -0.32
MCF2L-226ENST00000486210 Q6ZRG5 221 aa13.08□□□□□ -0.32
MCF2L-226ENST00000486210 TMEM61Q8N0U2 210 aa13.08□□□□□ -0.32
MCF2L-226ENST00000486210 C9orf62Q8N4C0 152 aa13.08□□□□□ -0.32
MCF2L-226ENST00000486210 SCRT1Q9BWW7 348 aa13.08□□□□□ -0.32
MCF2L-226ENST00000486210 SLC25A39Q9BZJ4 359 aaPredicted RBP13.08□□□□□ -0.32
MCF2L-226ENST00000486210 SH3BGRL3Q9H299 93 aa13.08□□□□□ -0.32
MCF2L-226ENST00000486210 HECTD4Q9Y4D8 3996 aa13.07□□□□□ -0.32
MCF2L-226ENST00000486210 KANTRA0A1W2PQU2 76 aa13.07□□□□□ -0.32
MCF2L-226ENST00000486210 A0A1W2PS18 150 aa13.07□□□□□ -0.32
MCF2L-226ENST00000486210 ZNF98A6NK75 572 aa13.07□□□□□ -0.32
MCF2L-226ENST00000486210 COX7A2P2O60397 106 aa13.07□□□□□ -0.32
MCF2L-226ENST00000486210 FFAR4Q5NUL3 377 aa13.07□□□□□ -0.32
MCF2L-226ENST00000486210 PXDC1Q5TGL8 231 aa13.07□□□□□ -0.32
MCF2L-226ENST00000486210 RBPMS2Q6ZRY4 209 aaKnown RBP13.07□□□□□ -0.32
MCF2L-226ENST00000486210 TCF24Q7RTU0 167 aa13.07□□□□□ -0.32
MCF2L-226ENST00000486210 GLMPQ8WWB7 406 aa13.07□□□□□ -0.32
MCF2L-226ENST00000486210 PPP1R14BQ96C90 147 aa13.07□□□□□ -0.32
MCF2L-226ENST00000486210 NARS2Q96I59 477 aaKnown RBP13.07□□□□□ -0.32
MCF2L-226ENST00000486210 SHANK2-AS3Q9BTD1 123 aa13.07□□□□□ -0.32
MCF2L-226ENST00000486210 DNAJC4Q9NNZ3 241 aa13.07□□□□□ -0.32
MCF2L-226ENST00000486210 TIMM9Q9Y5J7 89 aa13.07□□□□□ -0.32
MCF2L-226ENST00000486210 C10orf113Q5VZT2 155 aa13.06□□□□□ -0.32
MCF2L-226ENST00000486210 LINC00305Q7Z4B0 112 aa13.06□□□□□ -0.32
MCF2L-226ENST00000486210 KIAA1109Q2LD37 5005 aa13.06□□□□□ -0.32
MCF2L-226ENST00000486210 IGKV3-7A0A075B6H7 116 aa13.05□□□□□ -0.32
MCF2L-226ENST00000486210 ELOA3CA0A087WX78 387 aaPredicted RBP13.05□□□□□ -0.32
MCF2L-226ENST00000486210 TRAV5A0A0B4J249 113 aa13.05□□□□□ -0.32
MCF2L-226ENST00000486210 TRAV25A0A0B4J276 109 aa13.05□□□□□ -0.32
MCF2L-226ENST00000486210 BMI1P35226 326 aa13.05□□□□□ -0.32
MCF2L-226ENST00000486210 SPATA31B1PQ5VZV4 182 aa13.05□□□□□ -0.32
MCF2L-226ENST00000486210 OR1L4Q8NGR5 311 aa13.05□□□□□ -0.32
MCF2L-226ENST00000486210 ZNF471Q9BX82 626 aaPredicted RBP13.05□□□□□ -0.32
MCF2L-226ENST00000486210 SLC25A32Q9H2D1 315 aa13.05□□□□□ -0.32
MCF2L-226ENST00000486210 TMEM231Q9H6L2 316 aa13.05□□□□□ -0.32
MCF2L-226ENST00000486210 SLC25A22Q9H936 323 aa13.05□□□□□ -0.32
MCF2L-226ENST00000486210 KCNIP2Q9NS61 270 aa13.05□□□□□ -0.32
MCF2L-226ENST00000486210 LOC102724200A0A096LPH7 203 aaPredicted RBP13.04□□□□□ -0.32
MCF2L-226ENST00000486210 GBGT1Q8N5D6 347 aa13.04□□□□□ -0.32
MCF2L-226ENST00000486210 GRAMD2BQ96HH9 432 aa13.04□□□□□ -0.32
MCF2L-226ENST00000486210 PFDN5Q99471 154 aa13.04□□□□□ -0.32
MCF2L-226ENST00000486210 PSMG3Q9BT73 122 aaPredicted RBP13.04□□□□□ -0.32
MCF2L-226ENST00000486210 TSPAN4O14817 238 aa13.03□□□□□ -0.32
MCF2L-226ENST00000486210 EIF3GO75821 320 aaKnown RBP eCLIP13.03□□□□□ -0.32
MCF2L-226ENST00000486210 RAB2AP61019 212 aa13.03□□□□□ -0.32
MCF2L-226ENST00000486210 C1orf194Q5T5A4 169 aa13.03□□□□□ -0.32
MCF2L-226ENST00000486210 SIGLEC15Q6ZMC9 328 aa13.03□□□□□ -0.32
MCF2L-226ENST00000486210 MIR17HGQ75NE6 70 aa13.03□□□□□ -0.32
MCF2L-226ENST00000486210 OR2G3Q8NGZ4 309 aa13.03□□□□□ -0.32
MCF2L-226ENST00000486210 GATAD1Q8WUU5 269 aa13.03□□□□□ -0.32
MCF2L-226ENST00000486210 SEPSECSQ9HD40 501 aaKnown RBP13.03□□□□□ -0.32
MCF2L-226ENST00000486210 PLA2G2EQ9NZK7 142 aa13.03□□□□□ -0.32
MCF2L-226ENST00000486210 PFDN2Q9UHV9 154 aa13.03□□□□□ -0.32
MCF2L-226ENST00000486210 BOLA1Q9Y3E2 137 aa13.03□□□□□ -0.32
MCF2L-226ENST00000486210 BOLA2-SMG1P6H3BVE0 249 aa13.02□□□□□ -0.33
MCF2L-226ENST00000486210 TFPI2P48307 235 aa13.02□□□□□ -0.33
MCF2L-226ENST00000486210 RPL11P62913 178 aaKnown RBP13.02□□□□□ -0.33
MCF2L-226ENST00000486210 FAM78BQ5VT40 261 aa13.02□□□□□ -0.33
MCF2L-226ENST00000486210 OR8I2Q8N0Y5 310 aa13.02□□□□□ -0.33
MCF2L-226ENST00000486210 RPP25LQ8N5L8 163 aaKnown RBP13.02□□□□□ -0.33
MCF2L-226ENST00000486210 GNPNAT1Q96EK6 184 aaPredicted RBP13.02□□□□□ -0.33
MCF2L-226ENST00000486210 C17orf77Q96MU5 243 aa13.02□□□□□ -0.33
MCF2L-226ENST00000486210 MRPS12O15235 138 aaKnown RBP13.01□□□□□ -0.33
MCF2L-226ENST00000486210 SPP1P10451 314 aa13.01□□□□□ -0.33
MCF2L-226ENST00000486210 PMS2P11Q13670 270 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms