RNA–Protein interactions for RNA: ENST00000485870.1

COL1A1-206, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 403 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-206ENST00000485870 ZNF546Q86UE3 836 aa13.41□□□□□ -0.26
COL1A1-206ENST00000485870 C17orf77Q96MU5 243 aa13.41□□□□□ -0.26
COL1A1-206ENST00000485870 GPR82Q96P67 336 aa13.41□□□□□ -0.26
COL1A1-206ENST00000485870 LYRM2Q9NU23 88 aaPredicted RBP13.41□□□□□ -0.26
COL1A1-206ENST00000485870 PLECQ15149 4684 aaKnown RBP13.4□□□□□ -0.26
COL1A1-206ENST00000485870 IGSF23A1L1A6 192 aa13.4□□□□□ -0.26
COL1A1-206ENST00000485870 ATF4P18848 351 aaPredicted RBP13.4□□□□□ -0.26
COL1A1-206ENST00000485870 NUTF2P61970 127 aaKnown RBP13.4□□□□□ -0.26
COL1A1-206ENST00000485870 SAMD13Q5VXD3 122 aa13.4□□□□□ -0.26
COL1A1-206ENST00000485870 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.4□□□□□ -0.26
COL1A1-206ENST00000485870 FOXI2Q6ZQN5 318 aa13.4□□□□□ -0.26
COL1A1-206ENST00000485870 MGST2Q99735 147 aa13.4□□□□□ -0.26
COL1A1-206ENST00000485870 C11orf68Q9H3H3 251 aaKnown RBP13.4□□□□□ -0.26
COL1A1-206ENST00000485870 SAV1Q9H4B6 383 aaPredicted RBP13.4□□□□□ -0.26
COL1A1-206ENST00000485870 FGL1Q08830 312 aa13.39□□□□□ -0.27
COL1A1-206ENST00000485870 PATE2Q6UY27 113 aa13.39□□□□□ -0.27
COL1A1-206ENST00000485870 TMEM252Q8N6L7 170 aa13.39□□□□□ -0.27
COL1A1-206ENST00000485870 C20orf173Q96LM9 149 aa13.39□□□□□ -0.27
COL1A1-206ENST00000485870 MARVELD1Q9BSK0 173 aa13.39□□□□□ -0.27
COL1A1-206ENST00000485870 ARV1Q9H2C2 271 aa13.39□□□□□ -0.27
COL1A1-206ENST00000485870 XCL2Q9UBD3 114 aa13.39□□□□□ -0.27
COL1A1-206ENST00000485870 F6UB75 175 aa13.38□□□□□ -0.27
COL1A1-206ENST00000485870 RPL7P18124 248 aaKnown RBP13.38□□□□□ -0.27
COL1A1-206ENST00000485870 SULT1A1P50225 295 aa13.38□□□□□ -0.27
COL1A1-206ENST00000485870 FXYD7P58549 80 aa13.38□□□□□ -0.27
COL1A1-206ENST00000485870 IGFL4Q6B9Z1 124 aa13.38□□□□□ -0.27
COL1A1-206ENST00000485870 S100A7AQ86SG5 101 aa13.38□□□□□ -0.27
COL1A1-206ENST00000485870 STX12Q86Y82 276 aa13.38□□□□□ -0.27
COL1A1-206ENST00000485870 Q8NAQ8 132 aa13.38□□□□□ -0.27
COL1A1-206ENST00000485870 CSNK1G2-AS1Q8NCQ2 148 aa13.38□□□□□ -0.27
COL1A1-206ENST00000485870 OR4B1Q8NGF8 309 aa13.38□□□□□ -0.27
COL1A1-206ENST00000485870 RPRMQ9NS64 109 aa13.38□□□□□ -0.27
COL1A1-206ENST00000485870 UQCC1Q9NVA1 299 aa13.38□□□□□ -0.27
COL1A1-206ENST00000485870 IGHV4-28A0A0C4DH34 117 aa13.37□□□□□ -0.27
COL1A1-206ENST00000485870 JTBO76095 146 aa13.37□□□□□ -0.27
COL1A1-206ENST00000485870 CAMLGP49069 296 aa13.37□□□□□ -0.27
COL1A1-206ENST00000485870 LRRC37A5PQ49AS3 106 aa13.37□□□□□ -0.27
COL1A1-206ENST00000485870 PXDC1Q5TGL8 231 aa13.37□□□□□ -0.27
COL1A1-206ENST00000485870 EBLN2Q6P2I7 272 aa13.37□□□□□ -0.27
COL1A1-206ENST00000485870 C1QTNF4Q9BXJ3 329 aa13.37□□□□□ -0.27
COL1A1-206ENST00000485870 UBE2L5PA0A1B0GUS4 154 aa13.36□□□□□ -0.27
COL1A1-206ENST00000485870 NUPR2A6NF83 97 aa13.36□□□□□ -0.27
COL1A1-206ENST00000485870 ZNF705EA8MWA4 302 aaPredicted RBP13.36□□□□□ -0.27
COL1A1-206ENST00000485870 COX7A2P2O60397 106 aa13.36□□□□□ -0.27
COL1A1-206ENST00000485870 S100A11P31949 105 aa13.36□□□□□ -0.27
COL1A1-206ENST00000485870 NANOS2P60321 138 aaKnown RBP13.36□□□□□ -0.27
COL1A1-206ENST00000485870 HBG1P69891 147 aa13.36□□□□□ -0.27
COL1A1-206ENST00000485870 HBG2P69892 147 aa13.36□□□□□ -0.27
COL1A1-206ENST00000485870 RAB31Q13636 194 aa13.36□□□□□ -0.27
COL1A1-206ENST00000485870 C11orf45Q8TAV5 145 aa13.36□□□□□ -0.27
COL1A1-206ENST00000485870 NMES1Q9C002 83 aa13.36□□□□□ -0.27
COL1A1-206ENST00000485870 WDR83OSQ9Y284 106 aa13.36□□□□□ -0.27
COL1A1-206ENST00000485870 X6R8D5 127 aa13.36□□□□□ -0.27
COL1A1-206ENST00000485870 TRAV8-2A0A0B4J237 113 aa13.35□□□□□ -0.27
COL1A1-206ENST00000485870 A0A0J9YX75 114 aa13.35□□□□□ -0.27
COL1A1-206ENST00000485870 SSNA1O43805 119 aa13.35□□□□□ -0.27
COL1A1-206ENST00000485870 RLN2P04090 185 aa13.35□□□□□ -0.27
COL1A1-206ENST00000485870 MIFP14174 115 aa13.35□□□□□ -0.27
COL1A1-206ENST00000485870 BAXQ07812 192 aa13.35□□□□□ -0.27
COL1A1-206ENST00000485870 VWC2Q2TAL6 325 aa13.35□□□□□ -0.27
COL1A1-206ENST00000485870 FAM78BQ5VT40 261 aa13.35□□□□□ -0.27
COL1A1-206ENST00000485870 SPATA31B1PQ5VZV4 182 aa13.35□□□□□ -0.27
COL1A1-206ENST00000485870 MIC13Q5XKP0 118 aa13.35□□□□□ -0.27
COL1A1-206ENST00000485870 CEMP1Q6PRD7 247 aaPredicted RBP13.35□□□□□ -0.27
COL1A1-206ENST00000485870 LINC00305Q7Z4B0 112 aa13.35□□□□□ -0.27
COL1A1-206ENST00000485870 RNF182Q8N6D2 247 aa13.35□□□□□ -0.27
COL1A1-206ENST00000485870 RBMY1A1P0DJD3 496 aaKnown RBP13.34□□□□□ -0.27
COL1A1-206ENST00000485870 RBMY1CP0DJD4 496 aa13.34□□□□□ -0.27
COL1A1-206ENST00000485870 RBMY1FQ15415 496 aaKnown RBP13.34□□□□□ -0.27
COL1A1-206ENST00000485870 C10orf113Q5VZT2 155 aa13.34□□□□□ -0.27
COL1A1-206ENST00000485870 PHLDA1Q8WV24 401 aaPredicted RBP13.34□□□□□ -0.27
COL1A1-206ENST00000485870 TMEM37Q8WXS4 190 aa13.34□□□□□ -0.27
COL1A1-206ENST00000485870 SLC35B3Q9H1N7 401 aa13.34□□□□□ -0.27
COL1A1-206ENST00000485870 OR5AC2Q9NZP5 309 aa13.34□□□□□ -0.27
COL1A1-206ENST00000485870 ALMS1Q8TCU4 4167 aa13.33□□□□□ -0.27
COL1A1-206ENST00000485870 A0A087X0K7 114 aa13.33□□□□□ -0.28
COL1A1-206ENST00000485870 FGF7P21781 194 aa13.33□□□□□ -0.28
COL1A1-206ENST00000485870 H2BFSP57053 126 aa13.33□□□□□ -0.28
COL1A1-206ENST00000485870 CYCSP99999 105 aaKnown RBP13.33□□□□□ -0.28
COL1A1-206ENST00000485870 PSG9Q00887 426 aa13.33□□□□□ -0.28
COL1A1-206ENST00000485870 ZNF709Q8N972 641 aa13.33□□□□□ -0.28
COL1A1-206ENST00000485870 LRRC20Q8TCA0 184 aa13.33□□□□□ -0.28
COL1A1-206ENST00000485870 CLUHP3Q96NS8 147 aa13.33□□□□□ -0.28
COL1A1-206ENST00000485870 MFFQ9GZY8 342 aa13.33□□□□□ -0.28
COL1A1-206ENST00000485870 RNF24Q9Y225 148 aa13.33□□□□□ -0.28
COL1A1-206ENST00000485870 HYDINQ4G0P3 5121 aa13.32□□□□□ -0.28
COL1A1-206ENST00000485870 ELOA3CA0A087WX78 387 aaPredicted RBP13.32□□□□□ -0.28
COL1A1-206ENST00000485870 E5RGE8 158 aa13.32□□□□□ -0.28
COL1A1-206ENST00000485870 H0YIZ8 118 aa13.32□□□□□ -0.28
COL1A1-206ENST00000485870 MRPS12O15235 138 aaKnown RBP13.32□□□□□ -0.28
COL1A1-206ENST00000485870 SNRPCP09234 159 aaKnown RBP13.32□□□□□ -0.28
COL1A1-206ENST00000485870 HLA-DMBP28068 263 aa13.32□□□□□ -0.28
COL1A1-206ENST00000485870 PRR20EP86478 221 aa13.32□□□□□ -0.28
COL1A1-206ENST00000485870 PRR20CP86479 221 aa13.32□□□□□ -0.28
COL1A1-206ENST00000485870 PRR20DP86480 221 aa13.32□□□□□ -0.28
COL1A1-206ENST00000485870 PRR20BP86481 221 aa13.32□□□□□ -0.28
COL1A1-206ENST00000485870 PRR20AP86496 221 aa13.32□□□□□ -0.28
COL1A1-206ENST00000485870 NHLH2Q02577 135 aa13.32□□□□□ -0.28
COL1A1-206ENST00000485870 ATP6V1FQ16864 119 aa13.32□□□□□ -0.28
COL1A1-206ENST00000485870 MORN5Q5VZ52 161 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms